RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 ADAM23O75077 832 aa7.91□□□□□ -1.14
RAB3IP-214ENST00000550847 PHACTR2O75167 634 aa7.91□□□□□ -1.14
RAB3IP-214ENST00000550847 SMNDC1O75940 238 aaKnown RBP eCLIP7.91□□□□□ -1.14
RAB3IP-214ENST00000550847 IGHA2P01877 340 aa7.91□□□□□ -1.14
RAB3IP-214ENST00000550847 EPHA1P21709 976 aa7.91□□□□□ -1.14
RAB3IP-214ENST00000550847 ITGB7P26010 798 aa7.91□□□□□ -1.14
RAB3IP-214ENST00000550847 CDC25BP30305 580 aa7.91□□□□□ -1.14
RAB3IP-214ENST00000550847 USP5P45974 858 aa7.91□□□□□ -1.14
RAB3IP-214ENST00000550847 GALNT11Q8NCW6 608 aa7.91□□□□□ -1.14
RAB3IP-214ENST00000550847 NACC1Q96RE7 527 aa7.91□□□□□ -1.14
RAB3IP-214ENST00000550847 PPME1Q9Y570 386 aa7.91□□□□□ -1.14
RAB3IP-214ENST00000550847 C9orf172C9J069 976 aa7.9□□□□□ -1.14
RAB3IP-214ENST00000550847 LINC01387J3KSC0 135 aa7.9□□□□□ -1.14
RAB3IP-214ENST00000550847 POLR3DP05423 398 aaPredicted RBP7.9□□□□□ -1.14
RAB3IP-214ENST00000550847 PEAR1Q5VY43 1037 aaPredicted RBP7.9□□□□□ -1.14
RAB3IP-214ENST00000550847 TTC16Q8NEE8 873 aa7.9□□□□□ -1.14
RAB3IP-214ENST00000550847 ZKSCAN3Q9BRR0 538 aa7.9□□□□□ -1.14
RAB3IP-214ENST00000550847 SOWAHDA6NJG2 315 aa7.89□□□□□ -1.15
RAB3IP-214ENST00000550847 CDC27P30260 824 aa7.89□□□□□ -1.15
RAB3IP-214ENST00000550847 EHHADHQ08426 723 aa7.89□□□□□ -1.15
RAB3IP-214ENST00000550847 USPL1Q5W0Q7 1092 aa7.89□□□□□ -1.15
RAB3IP-214ENST00000550847 CARD10Q9BWT7 1032 aa7.89□□□□□ -1.15
RAB3IP-214ENST00000550847 ZFYVE28Q9HCC9 887 aa7.89□□□□□ -1.15
RAB3IP-214ENST00000550847 USP21Q9UK80 565 aa7.89□□□□□ -1.15
RAB3IP-214ENST00000550847 BRPF3Q9ULD4 1205 aa7.89□□□□□ -1.15
RAB3IP-214ENST00000550847 PDE2AO00408 941 aaPredicted RBP7.88□□□□□ -1.15
RAB3IP-214ENST00000550847 BRD1O95696 1058 aa7.88□□□□□ -1.15
RAB3IP-214ENST00000550847 PDE4CQ08493 712 aa7.88□□□□□ -1.15
RAB3IP-214ENST00000550847 RSPO4Q2I0M5 234 aaPredicted RBP7.88□□□□□ -1.15
RAB3IP-214ENST00000550847 NKAPLQ5M9Q1 402 aa7.88□□□□□ -1.15
RAB3IP-214ENST00000550847 TXNRD3Q86VQ6 643 aa7.88□□□□□ -1.15
RAB3IP-214ENST00000550847 FAM129BQ96TA1 746 aa7.88□□□□□ -1.15
RAB3IP-214ENST00000550847 ADAM19Q9H013 955 aa7.88□□□□□ -1.15
RAB3IP-214ENST00000550847 KCNK4Q9NYG8 393 aa7.88□□□□□ -1.15
RAB3IP-214ENST00000550847 GNEQ9Y223 722 aaKnown RBP7.88□□□□□ -1.15
RAB3IP-214ENST00000550847 GPR182O15218 404 aa7.87□□□□□ -1.15
RAB3IP-214ENST00000550847 NOS3P29474 1203 aa7.87□□□□□ -1.15
RAB3IP-214ENST00000550847 ORC1Q13415 861 aa7.87□□□□□ -1.15
RAB3IP-214ENST00000550847 FOXD4L6Q3SYB3 417 aaPredicted RBP7.87□□□□□ -1.15
RAB3IP-214ENST00000550847 IGF2-ASQ6U949 168 aa7.87□□□□□ -1.15
RAB3IP-214ENST00000550847 FOXD4L3Q6VB84 417 aaPredicted RBP7.87□□□□□ -1.15
RAB3IP-214ENST00000550847 CCER1Q8TC90 406 aaPredicted RBP7.87□□□□□ -1.15
RAB3IP-214ENST00000550847 OSMRQ99650 979 aa7.87□□□□□ -1.15
RAB3IP-214ENST00000550847 SSBP4Q9BWG4 385 aaPredicted RBP7.87□□□□□ -1.15
RAB3IP-214ENST00000550847 K7ELQ4 463 aaPredicted RBP7.86□□□□□ -1.15
RAB3IP-214ENST00000550847 ALX3O95076 343 aa7.86□□□□□ -1.15
RAB3IP-214ENST00000550847 WISP1O95388 367 aa7.86□□□□□ -1.15
RAB3IP-214ENST00000550847 PTPRAP18433 802 aa7.86□□□□□ -1.15
RAB3IP-214ENST00000550847 NRG1Q02297 640 aaPredicted RBP7.86□□□□□ -1.15
RAB3IP-214ENST00000550847 HGSNATQ68CP4 663 aa7.86□□□□□ -1.15
RAB3IP-214ENST00000550847 CACTIN-AS1Q8N1I8 211 aa7.86□□□□□ -1.15
RAB3IP-214ENST00000550847 TMEM102Q8N9M5 508 aaPredicted RBP7.86□□□□□ -1.15
RAB3IP-214ENST00000550847 WFDC12Q8WWY7 111 aa7.86□□□□□ -1.15
RAB3IP-214ENST00000550847 PMEPA1Q969W9 287 aa7.86□□□□□ -1.15
RAB3IP-214ENST00000550847 SOX13Q9UN79 622 aa7.86□□□□□ -1.15
RAB3IP-214ENST00000550847 AMOTL2Q9Y2J4 779 aa7.86□□□□□ -1.15
RAB3IP-214ENST00000550847 NDUFB5O43674 189 aa7.85□□□□□ -1.15
RAB3IP-214ENST00000550847 IREB2P48200 963 aaKnown RBP7.85□□□□□ -1.15
RAB3IP-214ENST00000550847 NXPE3Q969Y0 559 aa7.85□□□□□ -1.15
RAB3IP-214ENST00000550847 MEGF10Q96KG7 1140 aa7.85□□□□□ -1.15
RAB3IP-214ENST00000550847 SRA1Q9HD15 236 aaKnown RBP7.85□□□□□ -1.15
RAB3IP-214ENST00000550847 METTL12A8MUP2 240 aa7.84□□□□□ -1.15
RAB3IP-214ENST00000550847 FSCN2O14926 492 aa7.84□□□□□ -1.15
RAB3IP-214ENST00000550847 DDX3YO15523 660 aaKnown RBP7.84□□□□□ -1.15
RAB3IP-214ENST00000550847 ADAM11O75078 769 aa7.84□□□□□ -1.15
RAB3IP-214ENST00000550847 EDN3P14138 238 aa7.84□□□□□ -1.15
RAB3IP-214ENST00000550847 AGGF1Q8N302 714 aaeCLIP7.84□□□□□ -1.15
RAB3IP-214ENST00000550847 MUC3BQ9H195 1237 aa7.84□□□□□ -1.15
RAB3IP-214ENST00000550847 F8W735 103 aaPredicted RBP7.83□□□□□ -1.16
RAB3IP-214ENST00000550847 VN1R5Q7Z5H4 357 aa7.83□□□□□ -1.16
RAB3IP-214ENST00000550847 MAP4K3Q8IVH8 894 aa7.83□□□□□ -1.16
RAB3IP-214ENST00000550847 FOXD4L4Q8WXT5 416 aaPredicted RBP7.83□□□□□ -1.16
RAB3IP-214ENST00000550847 BHLHE41Q9C0J9 482 aaPredicted RBP7.83□□□□□ -1.16
RAB3IP-214ENST00000550847 A0A1W2PP55 124 aa7.82□□□□□ -1.16
RAB3IP-214ENST00000550847 H3BRJ5 948 aa7.82□□□□□ -1.16
RAB3IP-214ENST00000550847 CD68P34810 354 aaPredicted RBP7.82□□□□□ -1.16
RAB3IP-214ENST00000550847 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.82□□□□□ -1.16
RAB3IP-214ENST00000550847 GALNT12Q8IXK2 581 aa7.82□□□□□ -1.16
RAB3IP-214ENST00000550847 KLHDC7BQ96G42 594 aa7.82□□□□□ -1.16
RAB3IP-214ENST00000550847 TRAIPQ9BWF2 469 aa7.82□□□□□ -1.16
RAB3IP-214ENST00000550847 MRPL18Q9H0U6 180 aaKnown RBP7.82□□□□□ -1.16
RAB3IP-214ENST00000550847 SEMA6BQ9H3T3 888 aa7.82□□□□□ -1.16
RAB3IP-214ENST00000550847 IVNS1ABPQ9Y6Y0 642 aa7.82□□□□□ -1.16
RAB3IP-214ENST00000550847 DYRK3O43781 588 aa7.81□□□□□ -1.16
RAB3IP-214ENST00000550847 TMC7Q7Z402 723 aa7.81□□□□□ -1.16
RAB3IP-214ENST00000550847 UBASH3BQ8TF42 649 aa7.81□□□□□ -1.16
RAB3IP-214ENST00000550847 TCF12Q99081 682 aa7.81□□□□□ -1.16
RAB3IP-214ENST00000550847 RBCK1Q9BYM8 510 aa7.81□□□□□ -1.16
RAB3IP-214ENST00000550847 NIF3L1Q9GZT8 377 aa7.81□□□□□ -1.16
RAB3IP-214ENST00000550847 AKTIPQ9H8T0 292 aa7.81□□□□□ -1.16
RAB3IP-214ENST00000550847 BIN2Q9UBW5 565 aaPredicted RBP7.81□□□□□ -1.16
RAB3IP-214ENST00000550847 LOC100996750A0A140TA64 210 aa7.8□□□□□ -1.16
RAB3IP-214ENST00000550847 PDE3BQ13370 1112 aa7.8□□□□□ -1.16
RAB3IP-214ENST00000550847 Q6ZS46 218 aa7.8□□□□□ -1.16
RAB3IP-214ENST00000550847 KIAA1211Q6ZU35 1233 aa7.8□□□□□ -1.16
RAB3IP-214ENST00000550847 TMEM130Q8N3G9 435 aa7.8□□□□□ -1.16
RAB3IP-214ENST00000550847 ASAP3Q8TDY4 903 aa7.8□□□□□ -1.16
RAB3IP-214ENST00000550847 BSNDQ8WZ55 320 aa7.8□□□□□ -1.16
RAB3IP-214ENST00000550847 TP53INP1Q96A56 240 aa7.8□□□□□ -1.16
RAB3IP-214ENST00000550847 CITED4Q96RK1 184 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms