RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 OGFOD1Q8N543 542 aa11.85□□□□□ -0.51
YBX3-218ENST00000546298 PRDM10Q9NQV6 1147 aa11.85□□□□□ -0.51
YBX3-218ENST00000546298 LTBP1Q14766 1721 aa11.85□□□□□ -0.51
YBX3-218ENST00000546298 MYO3BQ8WXR4 1341 aa11.85□□□□□ -0.51
YBX3-218ENST00000546298 LAMB2P55268 1798 aa11.84□□□□□ -0.51
YBX3-218ENST00000546298 LRRC37AA6NMS7 1700 aa11.84□□□□□ -0.51
YBX3-218ENST00000546298 FOXO4P98177 505 aa11.84□□□□□ -0.51
YBX3-218ENST00000546298 CHRNDQ07001 517 aa11.84□□□□□ -0.51
YBX3-218ENST00000546298 GRM1Q13255 1194 aa11.84□□□□□ -0.51
YBX3-218ENST00000546298 CYP4F22Q6NT55 531 aa11.84□□□□□ -0.51
YBX3-218ENST00000546298 LMBR1LQ6UX01 489 aa11.84□□□□□ -0.51
YBX3-218ENST00000546298 C2orf69Q8N8R5 385 aa11.84□□□□□ -0.51
YBX3-218ENST00000546298 GMLQ99445 158 aa11.84□□□□□ -0.51
YBX3-218ENST00000546298 ZNF609O15014 1411 aa11.84□□□□□ -0.51
YBX3-218ENST00000546298 CCER2I3L3R5 266 aa11.83□□□□□ -0.52
YBX3-218ENST00000546298 EGFRP00533 1210 aa11.83□□□□□ -0.52
YBX3-218ENST00000546298 SCARF1Q14162 830 aa11.83□□□□□ -0.52
YBX3-218ENST00000546298 FBXW7Q969H0 707 aa11.83□□□□□ -0.52
YBX3-218ENST00000546298 GBA2Q9HCG7 927 aaPredicted RBP11.83□□□□□ -0.52
YBX3-218ENST00000546298 MYOZ2Q9NPC6 264 aa11.83□□□□□ -0.52
YBX3-218ENST00000546298 GGA3Q9NZ52 723 aa11.83□□□□□ -0.52
YBX3-218ENST00000546298 PTPRCP08575 1304 aa11.83□□□□□ -0.52
YBX3-218ENST00000546298 COL4A1P02462 1669 aa11.82□□□□□ -0.52
YBX3-218ENST00000546298 WTIPA6NIX2 430 aaPredicted RBP11.82□□□□□ -0.52
YBX3-218ENST00000546298 HUNKP57058 714 aa11.82□□□□□ -0.52
YBX3-218ENST00000546298 SLFN5Q08AF3 891 aa11.82□□□□□ -0.52
YBX3-218ENST00000546298 DACT2Q5SW24 774 aa11.82□□□□□ -0.52
YBX3-218ENST00000546298 TTLL5Q6EMB2 1281 aa11.82□□□□□ -0.52
YBX3-218ENST00000546298 LDHAL6AQ6ZMR3 332 aa11.82□□□□□ -0.52
YBX3-218ENST00000546298 C15orf52Q6ZUT6 534 aaKnown RBP11.82□□□□□ -0.52
YBX3-218ENST00000546298 MRPL50Q8N5N7 158 aaKnown RBP11.82□□□□□ -0.52
YBX3-218ENST00000546298 HDAC9Q9UKV0 1011 aa11.82□□□□□ -0.52
YBX3-218ENST00000546298 ADM5C9JUS6 153 aa11.81□□□□□ -0.52
YBX3-218ENST00000546298 CA12O43570 354 aa11.81□□□□□ -0.52
YBX3-218ENST00000546298 NOGQ13253 232 aa11.81□□□□□ -0.52
YBX3-218ENST00000546298 EPHA10Q5JZY3 1008 aa11.81□□□□□ -0.52
YBX3-218ENST00000546298 ANGEL2Q5VTE6 544 aaKnown RBP11.81□□□□□ -0.52
YBX3-218ENST00000546298 ZNF804AQ7Z570 1209 aa11.81□□□□□ -0.52
YBX3-218ENST00000546298 TXNRD3Q86VQ6 643 aa11.81□□□□□ -0.52
YBX3-218ENST00000546298 CD209Q9NNX6 404 aa11.81□□□□□ -0.52
YBX3-218ENST00000546298 CNNM1Q9NRU3 951 aa11.81□□□□□ -0.52
YBX3-218ENST00000546298 TAF5LO75529 589 aa11.8□□□□□ -0.52
YBX3-218ENST00000546298 CT47B1P0C2W7 299 aaPredicted RBP11.8□□□□□ -0.52
YBX3-218ENST00000546298 LBX1P52954 281 aa11.8□□□□□ -0.52
YBX3-218ENST00000546298 FKBP1BP68106 108 aa11.8□□□□□ -0.52
YBX3-218ENST00000546298 GTF2IP78347 998 aa11.8□□□□□ -0.52
YBX3-218ENST00000546298 ALDH1L2Q3SY69 923 aa11.8□□□□□ -0.52
YBX3-218ENST00000546298 RGMBQ6NW40 437 aa11.8□□□□□ -0.52
YBX3-218ENST00000546298 HELBQ8NG08 1087 aaPredicted RBP11.8□□□□□ -0.52
YBX3-218ENST00000546298 SSH1Q8WYL5 1049 aa11.8□□□□□ -0.52
YBX3-218ENST00000546298 CCDC102AQ96A19 550 aa11.8□□□□□ -0.52
YBX3-218ENST00000546298 CEP350Q5VT06 3117 aa11.8□□□□□ -0.52
YBX3-218ENST00000546298 PITPNM2Q9BZ72 1349 aa11.8□□□□□ -0.52
YBX3-218ENST00000546298 TAF1P21675 1872 aa11.79□□□□□ -0.52
YBX3-218ENST00000546298 PLIN1O60240 522 aa11.79□□□□□ -0.52
YBX3-218ENST00000546298 AOC2O75106 756 aa11.79□□□□□ -0.52
YBX3-218ENST00000546298 NBPF7P0C2Y1 421 aaPredicted RBP11.79□□□□□ -0.52
YBX3-218ENST00000546298 HSPA8P11142 646 aaKnown RBP11.79□□□□□ -0.52
YBX3-218ENST00000546298 KLRK1P26718 216 aa11.79□□□□□ -0.52
YBX3-218ENST00000546298 DLK2Q6UY11 383 aa11.79□□□□□ -0.52
YBX3-218ENST00000546298 CDCA5Q96FF9 252 aa11.79□□□□□ -0.52
YBX3-218ENST00000546298 SUCLG2Q96I99 432 aa11.79□□□□□ -0.52
YBX3-218ENST00000546298 UTYO14607 1347 aa11.79□□□□□ -0.52
YBX3-218ENST00000546298 NF2P35240 595 aa11.78□□□□□ -0.52
YBX3-218ENST00000546298 BRPF1P55201 1214 aaPredicted RBP11.78□□□□□ -0.52
YBX3-218ENST00000546298 MAPK8IP2Q13387 824 aaPredicted RBP11.78□□□□□ -0.52
YBX3-218ENST00000546298 UBE4AQ14139 1066 aa11.78□□□□□ -0.52
YBX3-218ENST00000546298 ZNF594Q96JF6 807 aaPredicted RBP11.78□□□□□ -0.52
YBX3-218ENST00000546298 MXD3Q9BW11 206 aa11.78□□□□□ -0.52
YBX3-218ENST00000546298 SMC4Q9NTJ3 1288 aa11.78□□□□□ -0.52
YBX3-218ENST00000546298 ASTN2O75129 1339 aaPredicted RBP11.78□□□□□ -0.52
YBX3-218ENST00000546298 SNAP23O00161 211 aa11.77□□□□□ -0.53
YBX3-218ENST00000546298 WNT10BO00744 389 aa11.77□□□□□ -0.53
YBX3-218ENST00000546298 IL1R1P14778 569 aa11.77□□□□□ -0.53
YBX3-218ENST00000546298 ZNF157P51786 506 aaPredicted RBP11.77□□□□□ -0.53
YBX3-218ENST00000546298 FKBP1AP62942 108 aaKnown RBP11.77□□□□□ -0.53
YBX3-218ENST00000546298 NBPF9Q3BBW0 867 aa11.77□□□□□ -0.53
YBX3-218ENST00000546298 RABL6Q3YEC7 729 aaPredicted RBP11.77□□□□□ -0.53
YBX3-218ENST00000546298 KIAA0825Q8IV33 1275 aa11.77□□□□□ -0.53
YBX3-218ENST00000546298 CDCA7LQ96GN5 454 aa11.77□□□□□ -0.53
YBX3-218ENST00000546298 HDAC5Q9UQL6 1122 aa11.77□□□□□ -0.53
YBX3-218ENST00000546298 MROH5Q6ZUA9 1318 aa11.77□□□□□ -0.53
YBX3-218ENST00000546298 CAPN15O75808 1086 aa11.76□□□□□ -0.53
YBX3-218ENST00000546298 SASH1O94885 1247 aa11.76□□□□□ -0.53
YBX3-218ENST00000546298 DLGAP5Q15398 846 aa11.76□□□□□ -0.53
YBX3-218ENST00000546298 APOBEC3FQ8IUX4 373 aaKnown RBP11.76□□□□□ -0.53
YBX3-218ENST00000546298 REM2Q8IYK8 340 aaPredicted RBP11.76□□□□□ -0.53
YBX3-218ENST00000546298 TRMT2AQ8IZ69 625 aaKnown RBP11.76□□□□□ -0.53
YBX3-218ENST00000546298 KAZALD1Q96I82 304 aa11.76□□□□□ -0.53
YBX3-218ENST00000546298 BICC1Q9H694 974 aaKnown RBP11.76□□□□□ -0.53
YBX3-218ENST00000546298 IRS2Q9Y4H2 1338 aa11.76□□□□□ -0.53
YBX3-218ENST00000546298 MYO1BO43795 1136 aa11.75□□□□□ -0.53
YBX3-218ENST00000546298 HIBADHP31937 336 aaKnown RBP11.75□□□□□ -0.53
YBX3-218ENST00000546298 API5Q9BZZ5 524 aaKnown RBP11.75□□□□□ -0.53
YBX3-218ENST00000546298 USP44Q9H0E7 712 aa11.75□□□□□ -0.53
YBX3-218ENST00000546298 RIPOR2Q9Y4F9 1068 aa11.75□□□□□ -0.53
YBX3-218ENST00000546298 FAM155AB1AL88 458 aaPredicted RBP11.74□□□□□ -0.53
YBX3-218ENST00000546298 KIF23Q02241 960 aaPredicted RBP11.74□□□□□ -0.53
YBX3-218ENST00000546298 TTLL12Q14166 644 aaPredicted RBP11.74□□□□□ -0.53
YBX3-218ENST00000546298 METTL24Q5JXM2 366 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms