RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 IFIT5Q13325 482 aaKnown RBP28.83■■■□□ 2.21
CHD4-214ENST00000545942 SLC4A10Q6U841 1118 aa28.83■■■□□ 2.21
CHD4-214ENST00000545942 E9PSI1 815 aa28.82■■■□□ 2.2
CHD4-214ENST00000545942 ALDH1L1O75891 902 aa28.82■■■□□ 2.2
CHD4-214ENST00000545942 USP17L8P0C7I0 530 aa28.82■■■□□ 2.2
CHD4-214ENST00000545942 SRCIN1Q9C0H9 1055 aa28.82■■■□□ 2.2
CHD4-214ENST00000545942 CHMP3Q9Y3E7 222 aa28.82■■■□□ 2.2
CHD4-214ENST00000545942 CHRNDQ07001 517 aa28.81■■■□□ 2.2
CHD4-214ENST00000545942 TXNRD3Q86VQ6 643 aa28.81■■■□□ 2.2
CHD4-214ENST00000545942 GGA3Q9NZ52 723 aa28.81■■■□□ 2.2
CHD4-214ENST00000545942 C9orf78Q9NZ63 289 aaPredicted RBP28.81■■■□□ 2.2
CHD4-214ENST00000545942 KCNJ4P48050 445 aa28.8■■■□□ 2.2
CHD4-214ENST00000545942 LMBR1LQ6UX01 489 aa28.8■■■□□ 2.2
CHD4-214ENST00000545942 DLK2Q6UY11 383 aa28.8■■■□□ 2.2
CHD4-214ENST00000545942 PRDM10Q9NQV6 1147 aa28.8■■■□□ 2.2
CHD4-214ENST00000545942 PSME4Q14997 1843 aa28.79■■■□□ 2.2
CHD4-214ENST00000545942 ADM5C9JUS6 153 aa28.79■■■□□ 2.2
CHD4-214ENST00000545942 STRIP1Q5VSL9 837 aa28.79■■■□□ 2.2
CHD4-214ENST00000545942 SULF1Q8IWU6 871 aa28.79■■■□□ 2.2
CHD4-214ENST00000545942 MYOZ2Q9NPC6 264 aa28.79■■■□□ 2.2
CHD4-214ENST00000545942 THSD7BQ9C0I4 1608 aa28.79■■■□□ 2.2
CHD4-214ENST00000545942 DACT2Q5SW24 774 aa28.78■■■□□ 2.2
CHD4-214ENST00000545942 MYO3BQ8WXR4 1341 aa28.78■■■□□ 2.2
CHD4-214ENST00000545942 KLRK1P26718 216 aa28.77■■■□□ 2.2
CHD4-214ENST00000545942 MAP2K2P36507 400 aa28.77■■■□□ 2.2
CHD4-214ENST00000545942 SCARF1Q14162 830 aa28.77■■■□□ 2.2
CHD4-214ENST00000545942 CCDC57Q2TAC2 916 aa28.77■■■□□ 2.2
CHD4-214ENST00000545942 EPHA10Q5JZY3 1008 aa28.77■■■□□ 2.2
CHD4-214ENST00000545942 MRPL50Q8N5N7 158 aaKnown RBP28.77■■■□□ 2.2
CHD4-214ENST00000545942 FBXW7Q969H0 707 aa28.77■■■□□ 2.2
CHD4-214ENST00000545942 ASTN2O75129 1339 aaPredicted RBP28.77■■■□□ 2.2
CHD4-214ENST00000545942 HUNKP57058 714 aa28.75■■■□□ 2.19
CHD4-214ENST00000545942 SLFN5Q08AF3 891 aa28.75■■■□□ 2.19
CHD4-214ENST00000545942 ANGEL2Q5VTE6 544 aaKnown RBP28.75■■■□□ 2.19
CHD4-214ENST00000545942 BEGAINQ9BUH8 593 aa28.75■■■□□ 2.19
CHD4-214ENST00000545942 AOC2O75106 756 aa28.74■■■□□ 2.19
CHD4-214ENST00000545942 LBX1P52954 281 aa28.74■■■□□ 2.19
CHD4-214ENST00000545942 TAF7LQ5H9L4 462 aa28.74■■■□□ 2.19
CHD4-214ENST00000545942 OGFOD1Q8N543 542 aa28.74■■■□□ 2.19
CHD4-214ENST00000545942 MXD3Q9BW11 206 aa28.74■■■□□ 2.19
CHD4-214ENST00000545942 GBA2Q9HCG7 927 aaPredicted RBP28.74■■■□□ 2.19
CHD4-214ENST00000545942 TAF5LO75529 589 aa28.73■■■□□ 2.19
CHD4-214ENST00000545942 TTLL5Q6EMB2 1281 aa28.73■■■□□ 2.19
CHD4-214ENST00000545942 C2orf69Q8N8R5 385 aa28.73■■■□□ 2.19
CHD4-214ENST00000545942 HELBQ8NG08 1087 aaPredicted RBP28.73■■■□□ 2.19
CHD4-214ENST00000545942 PTPRCP08575 1304 aa28.73■■■□□ 2.19
CHD4-214ENST00000545942 HSPA8P11142 646 aaKnown RBP28.72■■■□□ 2.19
CHD4-214ENST00000545942 LDHAL6AQ6ZMR3 332 aa28.72■■■□□ 2.19
CHD4-214ENST00000545942 C15orf52Q6ZUT6 534 aaKnown RBP28.72■■■□□ 2.19
CHD4-214ENST00000545942 PITPNM2Q9BZ72 1349 aa28.72■■■□□ 2.19
CHD4-214ENST00000545942 SNAP23O00161 211 aa28.71■■■□□ 2.19
CHD4-214ENST00000545942 MMP14P50281 582 aa28.71■■■□□ 2.19
CHD4-214ENST00000545942 ZNF594Q96JF6 807 aaPredicted RBP28.71■■■□□ 2.19
CHD4-214ENST00000545942 CD209Q9NNX6 404 aa28.71■■■□□ 2.19
CHD4-214ENST00000545942 UTYO14607 1347 aa28.7■■■□□ 2.19
CHD4-214ENST00000545942 IRS2Q9Y4H2 1338 aa28.7■■■□□ 2.19
CHD4-214ENST00000545942 NBPF7P0C2Y1 421 aaPredicted RBP28.7■■■□□ 2.19
CHD4-214ENST00000545942 SSH1Q8WYL5 1049 aa28.7■■■□□ 2.19
CHD4-214ENST00000545942 CDCA5Q96FF9 252 aa28.7■■■□□ 2.19
CHD4-214ENST00000545942 SUCLG2Q96I99 432 aa28.7■■■□□ 2.19
CHD4-214ENST00000545942 CNNM1Q9NRU3 951 aa28.7■■■□□ 2.19
CHD4-214ENST00000545942 CCER2I3L3R5 266 aa28.69■■■□□ 2.18
CHD4-214ENST00000545942 GTF2IP78347 998 aa28.69■■■□□ 2.18
CHD4-214ENST00000545942 NOGQ13253 232 aa28.69■■■□□ 2.18
CHD4-214ENST00000545942 CDCA7LQ96GN5 454 aa28.69■■■□□ 2.18
CHD4-214ENST00000545942 KAZALD1Q96I82 304 aa28.69■■■□□ 2.18
CHD4-214ENST00000545942 BRPF1P55201 1214 aaPredicted RBP28.68■■■□□ 2.18
CHD4-214ENST00000545942 NBPF9Q3BBW0 867 aa28.68■■■□□ 2.18
CHD4-214ENST00000545942 RGMBQ6NW40 437 aa28.68■■■□□ 2.18
CHD4-214ENST00000545942 ZNF804AQ7Z570 1209 aa28.68■■■□□ 2.18
CHD4-214ENST00000545942 POLR2AP24928 1970 aaKnown RBP28.68■■■□□ 2.18
CHD4-214ENST00000545942 ALDH1L2Q3SY69 923 aa28.67■■■□□ 2.18
CHD4-214ENST00000545942 KIAA0825Q8IV33 1275 aa28.67■■■□□ 2.18
CHD4-214ENST00000545942 HDAC9Q9UKV0 1011 aa28.67■■■□□ 2.18
CHD4-214ENST00000545942 ZNF646O15015 1829 aaPredicted RBP28.67■■■□□ 2.18
CHD4-214ENST00000545942 WNT10BO00744 389 aa28.66■■■□□ 2.18
CHD4-214ENST00000545942 PLIN1O60240 522 aa28.66■■■□□ 2.18
CHD4-214ENST00000545942 CAPN15O75808 1086 aa28.66■■■□□ 2.18
CHD4-214ENST00000545942 CA12O43570 354 aa28.65■■■□□ 2.18
CHD4-214ENST00000545942 TRMT2AQ8IZ69 625 aaKnown RBP28.65■■■□□ 2.18
CHD4-214ENST00000545942 BICC1Q9H694 974 aaKnown RBP28.65■■■□□ 2.18
CHD4-214ENST00000545942 IL1R1P14778 569 aa28.64■■■□□ 2.17
CHD4-214ENST00000545942 RABL6Q3YEC7 729 aaPredicted RBP28.64■■■□□ 2.17
CHD4-214ENST00000545942 CCDC102AQ96A19 550 aa28.64■■■□□ 2.17
CHD4-214ENST00000545942 ZNF157P51786 506 aaPredicted RBP28.63■■■□□ 2.17
CHD4-214ENST00000545942 FKBP1BP68106 108 aa28.63■■■□□ 2.17
CHD4-214ENST00000545942 SMC4Q9NTJ3 1288 aa28.63■■■□□ 2.17
CHD4-214ENST00000545942 SCAF8Q9UPN6 1271 aaKnown RBP28.63■■■□□ 2.17
CHD4-214ENST00000545942 FAM155AB1AL88 458 aaPredicted RBP28.62■■■□□ 2.17
CHD4-214ENST00000545942 SASH1O94885 1247 aa28.62■■■□□ 2.17
CHD4-214ENST00000545942 A0A1B0GUL6 1792 aa28.62■■■□□ 2.17
CHD4-214ENST00000545942 CT47B1P0C2W7 299 aaPredicted RBP28.61■■■□□ 2.17
CHD4-214ENST00000545942 UBE4AQ14139 1066 aa28.61■■■□□ 2.17
CHD4-214ENST00000545942 ZIC5Q96T25 663 aa28.61■■■□□ 2.17
CHD4-214ENST00000545942 PUS3Q9BZE2 481 aaKnown RBP28.61■■■□□ 2.17
CHD4-214ENST00000545942 CERS5Q8N5B7 392 aa28.6■■■□□ 2.17
CHD4-214ENST00000545942 ANKRD44Q8N8A2 993 aa28.6■■■□□ 2.17
CHD4-214ENST00000545942 TSKSQ9UJT2 592 aa28.6■■■□□ 2.17
CHD4-214ENST00000545942 ZBED3Q96IU2 234 aaPredicted RBP28.59■■■□□ 2.17
CHD4-214ENST00000545942 USP44Q9H0E7 712 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms