RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 ANKRD24Q8TF21 1146 aa10.16□□□□□ -0.78
LEMD3-206ENST00000545026 MDFIQ99750 246 aa10.16□□□□□ -0.78
LEMD3-206ENST00000545026 METTL12A8MUP2 240 aa10.15□□□□□ -0.78
LEMD3-206ENST00000545026 ITPKAP23677 461 aa10.15□□□□□ -0.78
LEMD3-206ENST00000545026 SPRED3Q2MJR0 410 aa10.15□□□□□ -0.78
LEMD3-206ENST00000545026 DTHD1Q6ZMT9 781 aa10.15□□□□□ -0.78
LEMD3-206ENST00000545026 HS2ST1Q7LGA3 356 aa10.15□□□□□ -0.78
LEMD3-206ENST00000545026 GGT7Q9UJ14 662 aa10.15□□□□□ -0.78
LEMD3-206ENST00000545026 DDX41Q9UJV9 622 aaKnown RBP10.15□□□□□ -0.78
LEMD3-206ENST00000545026 PPM1HQ9ULR3 514 aa10.15□□□□□ -0.78
LEMD3-206ENST00000545026 SLC6A14Q9UN76 642 aa10.15□□□□□ -0.78
LEMD3-206ENST00000545026 TTF2Q9UNY4 1162 aaKnown RBP10.15□□□□□ -0.78
LEMD3-206ENST00000545026 ADARB2-AS1A8MUL3 147 aa10.14□□□□□ -0.79
LEMD3-206ENST00000545026 PDE2AO00408 941 aaPredicted RBP10.14□□□□□ -0.79
LEMD3-206ENST00000545026 GHRHP01286 108 aa10.14□□□□□ -0.79
LEMD3-206ENST00000545026 ADH6P28332 368 aa10.14□□□□□ -0.79
LEMD3-206ENST00000545026 MAP3K10Q02779 954 aa10.14□□□□□ -0.79
LEMD3-206ENST00000545026 ZNF394Q53GI3 561 aa10.14□□□□□ -0.79
LEMD3-206ENST00000545026 ERMP1Q7Z2K6 904 aa10.14□□□□□ -0.79
LEMD3-206ENST00000545026 POP1Q99575 1024 aaKnown RBP10.14□□□□□ -0.79
LEMD3-206ENST00000545026 SRA1Q9HD15 236 aaKnown RBP10.14□□□□□ -0.79
LEMD3-206ENST00000545026 MBIPQ9NS73 344 aa10.14□□□□□ -0.79
LEMD3-206ENST00000545026 AKAP2Q9Y2D5 859 aa10.14□□□□□ -0.79
LEMD3-206ENST00000545026 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.14□□□□□ -0.79
LEMD3-206ENST00000545026 A0A096LPE4 126 aa10.13□□□□□ -0.79
LEMD3-206ENST00000545026 A0A1W2PPZ6 126 aa10.13□□□□□ -0.79
LEMD3-206ENST00000545026 VSIG8P0DPA2 414 aa10.13□□□□□ -0.79
LEMD3-206ENST00000545026 EIF2AK2P19525 551 aaKnown RBP10.13□□□□□ -0.79
LEMD3-206ENST00000545026 RACK1P63244 317 aaKnown RBP10.13□□□□□ -0.79
LEMD3-206ENST00000545026 FAM35AQ86V20 835 aa10.13□□□□□ -0.79
LEMD3-206ENST00000545026 NOC4LQ9BVI4 516 aaKnown RBP10.13□□□□□ -0.79
LEMD3-206ENST00000545026 CCSER2Q9H7U1 834 aa10.13□□□□□ -0.79
LEMD3-206ENST00000545026 NAGPAQ9UK23 515 aa10.13□□□□□ -0.79
LEMD3-206ENST00000545026 CPB1P15086 417 aa10.12□□□□□ -0.79
LEMD3-206ENST00000545026 ADH7P40394 386 aa10.12□□□□□ -0.79
LEMD3-206ENST00000545026 MAP2K3P46734 347 aa10.12□□□□□ -0.79
LEMD3-206ENST00000545026 USP48Q86UV5 1035 aa10.12□□□□□ -0.79
LEMD3-206ENST00000545026 FCHSD1Q86WN1 690 aa10.12□□□□□ -0.79
LEMD3-206ENST00000545026 RBSNQ9H1K0 784 aa10.12□□□□□ -0.79
LEMD3-206ENST00000545026 ACBD3Q9H3P7 528 aa10.12□□□□□ -0.79
LEMD3-206ENST00000545026 COPRSQ9NQ92 184 aa10.12□□□□□ -0.79
LEMD3-206ENST00000545026 PCDHGB7Q9Y5F8 929 aa10.12□□□□□ -0.79
LEMD3-206ENST00000545026 NEURL1BA8MQ27 555 aa10.11□□□□□ -0.79
LEMD3-206ENST00000545026 PERM1Q5SV97 790 aa10.11□□□□□ -0.79
LEMD3-206ENST00000545026 ASAP3Q8TDY4 903 aa10.11□□□□□ -0.79
LEMD3-206ENST00000545026 PLD4Q96BZ4 506 aa10.11□□□□□ -0.79
LEMD3-206ENST00000545026 ZFYVE1Q9HBF4 777 aa10.11□□□□□ -0.79
LEMD3-206ENST00000545026 NSFL1CQ9UNZ2 370 aaKnown RBP10.11□□□□□ -0.79
LEMD3-206ENST00000545026 FBXO24O75426 580 aa10.1□□□□□ -0.79
LEMD3-206ENST00000545026 CCDC85BQ15834 202 aaPredicted RBP10.1□□□□□ -0.79
LEMD3-206ENST00000545026 RNFT1Q5M7Z0 435 aa10.1□□□□□ -0.79
LEMD3-206ENST00000545026 CEP135Q66GS9 1140 aa10.1□□□□□ -0.79
LEMD3-206ENST00000545026 ZNF654Q8IZM8 581 aa10.1□□□□□ -0.79
LEMD3-206ENST00000545026 TINF2Q9BSI4 451 aa10.1□□□□□ -0.79
LEMD3-206ENST00000545026 RSRP1Q9BUV0 290 aa10.1□□□□□ -0.79
LEMD3-206ENST00000545026 COL25A1Q9BXS0 654 aaPredicted RBP10.1□□□□□ -0.79
LEMD3-206ENST00000545026 IGF1RP08069 1367 aa10.1□□□□□ -0.79
LEMD3-206ENST00000545026 SMNDC1O75940 238 aaKnown RBP eCLIP10.09□□□□□ -0.79
LEMD3-206ENST00000545026 ADAMTSL4Q6UY14 1074 aa10.09□□□□□ -0.79
LEMD3-206ENST00000545026 SV2BQ7L1I2 683 aa10.09□□□□□ -0.79
LEMD3-206ENST00000545026 MUC3BQ9H195 1237 aa10.09□□□□□ -0.79
LEMD3-206ENST00000545026 ZNF576Q9H609 170 aa10.09□□□□□ -0.79
LEMD3-206ENST00000545026 USP35Q9P2H5 1018 aa10.09□□□□□ -0.79
LEMD3-206ENST00000545026 GGA1Q9UJY5 639 aa10.09□□□□□ -0.79
LEMD3-206ENST00000545026 ELOA3CA0A087WX78 387 aaPredicted RBP10.08□□□□□ -0.8
LEMD3-206ENST00000545026 ELOA3DA6NLF2 546 aaPredicted RBP10.08□□□□□ -0.8
LEMD3-206ENST00000545026 TNNI2P48788 182 aa10.08□□□□□ -0.8
LEMD3-206ENST00000545026 ELOA3BQ3SY89 546 aa10.08□□□□□ -0.8
LEMD3-206ENST00000545026 RPS26P11Q5JNZ5 115 aaPredicted RBP10.08□□□□□ -0.8
LEMD3-206ENST00000545026 ELMSAN1Q6PJG2 1045 aa10.08□□□□□ -0.8
LEMD3-206ENST00000545026 TPTE2Q6XPS3 522 aa10.08□□□□□ -0.8
LEMD3-206ENST00000545026 ELOA3Q8NG57 546 aa10.08□□□□□ -0.8
LEMD3-206ENST00000545026 LPIN3Q9BQK8 851 aa10.08□□□□□ -0.8
LEMD3-206ENST00000545026 TRIM56Q9BRZ2 755 aaKnown RBP10.08□□□□□ -0.8
LEMD3-206ENST00000545026 SMG9Q9H0W8 520 aaKnown RBP10.08□□□□□ -0.8
LEMD3-206ENST00000545026 KBTBD4Q9NVX7 518 aa10.08□□□□□ -0.8
LEMD3-206ENST00000545026 FRRS1LQ9P0K9 344 aa10.08□□□□□ -0.8
LEMD3-206ENST00000545026 ERBB4Q15303 1308 aa10.07□□□□□ -0.8
LEMD3-206ENST00000545026 TERTO14746 1132 aaKnown RBP10.07□□□□□ -0.8
LEMD3-206ENST00000545026 FAAP100Q0VG06 881 aa10.07□□□□□ -0.8
LEMD3-206ENST00000545026 SREK1Q8WXA9 508 aaKnown RBP10.07□□□□□ -0.8
LEMD3-206ENST00000545026 BSNDQ8WZ55 320 aa10.07□□□□□ -0.8
LEMD3-206ENST00000545026 CEP44Q9C0F1 390 aa10.07□□□□□ -0.8
LEMD3-206ENST00000545026 CAPN10Q9HC96 672 aa10.07□□□□□ -0.8
LEMD3-206ENST00000545026 SEC31BQ9NQW1 1179 aa10.07□□□□□ -0.8
LEMD3-206ENST00000545026 ZNF787Q6DD87 383 aa10.06□□□□□ -0.8
LEMD3-206ENST00000545026 MICALL1Q8N3F8 863 aa10.06□□□□□ -0.8
LEMD3-206ENST00000545026 SLC43A3Q8NBI5 491 aa10.06□□□□□ -0.8
LEMD3-206ENST00000545026 TTC9Q92623 222 aa10.06□□□□□ -0.8
LEMD3-206ENST00000545026 NECAB3Q96P71 396 aaPredicted RBP10.06□□□□□ -0.8
LEMD3-206ENST00000545026 ADAM19Q9H013 955 aa10.06□□□□□ -0.8
LEMD3-206ENST00000545026 SOX13Q9UN79 622 aa10.06□□□□□ -0.8
LEMD3-206ENST00000545026 TRIM33Q9UPN9 1127 aa10.06□□□□□ -0.8
LEMD3-206ENST00000545026 ENC1O14682 589 aa10.05□□□□□ -0.8
LEMD3-206ENST00000545026 CELA3AP09093 270 aa10.05□□□□□ -0.8
LEMD3-206ENST00000545026 PTPRAP18433 802 aa10.05□□□□□ -0.8
LEMD3-206ENST00000545026 KRT76Q01546 638 aa10.05□□□□□ -0.8
LEMD3-206ENST00000545026 NFX1Q12986 1120 aaKnown RBP10.05□□□□□ -0.8
LEMD3-206ENST00000545026 PSAPL1Q6NUJ1 521 aa10.05□□□□□ -0.8
LEMD3-206ENST00000545026 SLCO4C1Q6ZQN7 724 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms