RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 RASSF7Q02833 373 aa14.89□□□□□ -0.03
DDX55-206ENST00000539934 C8orf34Q49A92 452 aa14.89□□□□□ -0.03
DDX55-206ENST00000539934 SLC4A10Q6U841 1118 aa14.89□□□□□ -0.03
DDX55-206ENST00000539934 NOL8Q76FK4 1167 aaKnown RBP14.89□□□□□ -0.03
DDX55-206ENST00000539934 IFNL2Q8IZJ0 200 aa14.89□□□□□ -0.03
DDX55-206ENST00000539934 PIM2Q9P1W9 311 aa14.89□□□□□ -0.03
DDX55-206ENST00000539934 SIPA1L3O60292 1781 aaPredicted RBP14.89□□□□□ -0.03
DDX55-206ENST00000539934 PKD1L3Q7Z443 1732 aa14.89□□□□□ -0.03
DDX55-206ENST00000539934 SCN11AQ9UI33 1791 aa14.89□□□□□ -0.03
DDX55-206ENST00000539934 H0YHG0 523 aa14.89□□□□□ -0.03
DDX55-206ENST00000539934 HMGB2P26583 209 aaKnown RBP14.89□□□□□ -0.03
DDX55-206ENST00000539934 SARNPP82979 210 aaKnown RBP14.89□□□□□ -0.03
DDX55-206ENST00000539934 FLIIQ13045 1269 aa14.89□□□□□ -0.03
DDX55-206ENST00000539934 FKBP5Q13451 457 aaPredicted RBP14.89□□□□□ -0.03
DDX55-206ENST00000539934 APBB1IPQ7Z5R6 666 aaPredicted RBP14.89□□□□□ -0.03
DDX55-206ENST00000539934 RPAINQ86UA6 219 aa14.89□□□□□ -0.03
DDX55-206ENST00000539934 TEX13AQ9BXU3 409 aaPredicted RBP14.89□□□□□ -0.03
DDX55-206ENST00000539934 ADAMTS7Q9UKP4 1686 aa14.88□□□□□ -0.03
DDX55-206ENST00000539934 SF3A1Q15459 793 aaKnown RBP14.88□□□□□ -0.03
DDX55-206ENST00000539934 RANBP17Q9H2T7 1088 aaKnown RBP14.88□□□□□ -0.03
DDX55-206ENST00000539934 F6X3S4 739 aa14.88□□□□□ -0.03
DDX55-206ENST00000539934 KCNQ3O43525 872 aa14.88□□□□□ -0.03
DDX55-206ENST00000539934 EIF2S2P20042 333 aaKnown RBP14.88□□□□□ -0.03
DDX55-206ENST00000539934 DALRD3Q5D0E6 543 aaKnown RBP14.88□□□□□ -0.03
DDX55-206ENST00000539934 GET4Q7L5D6 327 aaPredicted RBP14.88□□□□□ -0.03
DDX55-206ENST00000539934 PRIMPOLQ96LW4 560 aa14.88□□□□□ -0.03
DDX55-206ENST00000539934 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.88□□□□□ -0.034e-6■□□□□ 9.3
DDX55-206ENST00000539934 MYH14Q7Z406 1995 aaKnown RBP14.87□□□□□ -0.03
DDX55-206ENST00000539934 TESPA1A2RU30 521 aaPredicted RBP14.87□□□□□ -0.03
DDX55-206ENST00000539934 HOXB7P09629 217 aa14.87□□□□□ -0.03
DDX55-206ENST00000539934 CCT4P50991 539 aaKnown RBP14.87□□□□□ -0.03
DDX55-206ENST00000539934 DDR1Q08345 913 aa14.87□□□□□ -0.03
DDX55-206ENST00000539934 MAP9Q49MG5 647 aa14.87□□□□□ -0.03
DDX55-206ENST00000539934 FAM184AQ8NB25 1140 aa14.87□□□□□ -0.03
DDX55-206ENST00000539934 HELBQ8NG08 1087 aaPredicted RBP14.87□□□□□ -0.03
DDX55-206ENST00000539934 CXorf38Q8TB03 319 aa14.87□□□□□ -0.03
DDX55-206ENST00000539934 BRCA1P38398 1863 aaKnown RBP14.87□□□□□ -0.03
DDX55-206ENST00000539934 C4AP0C0L4 1744 aa14.87□□□□□ -0.03
DDX55-206ENST00000539934 HSPA1AP0DMV8 641 aaKnown RBP14.86□□□□□ -0.03
DDX55-206ENST00000539934 HSPA1BP0DMV9 641 aaKnown RBP14.86□□□□□ -0.03
DDX55-206ENST00000539934 FOXD4Q12950 439 aaPredicted RBP14.86□□□□□ -0.03
DDX55-206ENST00000539934 CDC37Q16543 378 aaPredicted RBP14.86□□□□□ -0.03
DDX55-206ENST00000539934 PLEKHG2Q9H7P9 1386 aa14.86□□□□□ -0.03
DDX55-206ENST00000539934 ABCD1P33897 745 aa14.86□□□□□ -0.03
DDX55-206ENST00000539934 PRELPP51888 382 aa14.86□□□□□ -0.03
DDX55-206ENST00000539934 RBM5P52756 815 aaKnown RBP eCLIP14.86□□□□□ -0.034e-6■■□□□ 12.4
DDX55-206ENST00000539934 HMGN5P82970 282 aaKnown RBP14.86□□□□□ -0.03
DDX55-206ENST00000539934 FSTL1Q12841 308 aa14.86□□□□□ -0.03
DDX55-206ENST00000539934 RBM26Q5T8P6 1007 aaKnown RBP14.86□□□□□ -0.03
DDX55-206ENST00000539934 KRBA2Q6ZNG9 492 aa14.86□□□□□ -0.03
DDX55-206ENST00000539934 GCC1Q96CN9 775 aa14.86□□□□□ -0.03
DDX55-206ENST00000539934 NOL7Q9UMY1 257 aaKnown RBP14.86□□□□□ -0.03
DDX55-206ENST00000539934 TERF2Q15554 542 aa14.85□□□□□ -0.03
DDX55-206ENST00000539934 KLHL23Q8NBE8 558 aa14.85□□□□□ -0.03
DDX55-206ENST00000539934 DCAF5Q96JK2 942 aa14.85□□□□□ -0.03
DDX55-206ENST00000539934 ANKRD18BA2A2Z9 1011 aa14.85□□□□□ -0.03
DDX55-206ENST00000539934 RPS6KA4O75676 772 aa14.85□□□□□ -0.03
DDX55-206ENST00000539934 SLC4A3P48751 1232 aa14.85□□□□□ -0.03
DDX55-206ENST00000539934 ZSCAN26Q16670 478 aa14.85□□□□□ -0.03
DDX55-206ENST00000539934 TNNT1P13805 278 aa14.84□□□□□ -0.03
DDX55-206ENST00000539934 SIRT2Q8IXJ6 389 aa14.84□□□□□ -0.03
DDX55-206ENST00000539934 MEIS3Q99687 375 aa14.84□□□□□ -0.03
DDX55-206ENST00000539934 KDM6AO15550 1401 aaPredicted RBP14.84□□□□□ -0.03
DDX55-206ENST00000539934 CASQ1P31415 396 aa14.84□□□□□ -0.03
DDX55-206ENST00000539934 CRKLP46109 303 aaKnown RBP14.84□□□□□ -0.03
DDX55-206ENST00000539934 RHBDL3P58872 404 aa14.84□□□□□ -0.03
DDX55-206ENST00000539934 NUCB1Q02818 461 aa14.84□□□□□ -0.03
DDX55-206ENST00000539934 RAD51AP2Q09MP3 1159 aa14.84□□□□□ -0.03
DDX55-206ENST00000539934 ACRBPQ8NEB7 543 aa14.84□□□□□ -0.03
DDX55-206ENST00000539934 PDCL2Q8N4E4 241 aa14.83□□□□□ -0.04
DDX55-206ENST00000539934 SMC1BQ8NDV3 1235 aa14.83□□□□□ -0.04
DDX55-206ENST00000539934 LNPKQ9C0E8 428 aa14.83□□□□□ -0.04
DDX55-206ENST00000539934 SLC52A2Q9HAB3 445 aa14.83□□□□□ -0.04
DDX55-206ENST00000539934 ZRANB2O95218 330 aaKnown RBP eCLIP14.82□□□□□ -0.04
DDX55-206ENST00000539934 CABP4P57796 275 aa14.82□□□□□ -0.04
DDX55-206ENST00000539934 ANKRD45Q5TZF3 282 aa14.82□□□□□ -0.04
DDX55-206ENST00000539934 CHD1LQ86WJ1 897 aa14.82□□□□□ -0.04
DDX55-206ENST00000539934 RPAP2Q8IXW5 612 aaPredicted RBP14.82□□□□□ -0.04
DDX55-206ENST00000539934 MAF1Q9H063 256 aa14.82□□□□□ -0.04
DDX55-206ENST00000539934 PHAXQ9H814 394 aaKnown RBP14.82□□□□□ -0.04
DDX55-206ENST00000539934 CHPF2Q9P2E5 772 aa14.82□□□□□ -0.04
DDX55-206ENST00000539934 SYNPO2Q9UMS6 1093 aa14.82□□□□□ -0.04
DDX55-206ENST00000539934 FRMD4BQ9Y2L6 1034 aa14.82□□□□□ -0.04
DDX55-206ENST00000539934 SBF1O95248 1867 aa14.82□□□□□ -0.04
DDX55-206ENST00000539934 TPD52L2O43399 206 aaKnown RBP14.82□□□□□ -0.04
DDX55-206ENST00000539934 HSP90AB1P08238 724 aaKnown RBP14.82□□□□□ -0.04
DDX55-206ENST00000539934 INHBEP58166 350 aa14.82□□□□□ -0.04
DDX55-206ENST00000539934 PPP2R5AQ15172 486 aa14.82□□□□□ -0.04
DDX55-206ENST00000539934 CCDC181Q5TID7 509 aa14.82□□□□□ -0.04
DDX55-206ENST00000539934 SNRNP27Q8WVK2 155 aaKnown RBP14.82□□□□□ -0.04
DDX55-206ENST00000539934 ANKRD44Q8N8A2 993 aa14.81□□□□□ -0.04
DDX55-206ENST00000539934 NFATC2IPQ8NCF5 419 aa14.81□□□□□ -0.04
DDX55-206ENST00000539934 ZNF219Q9P2Y4 722 aaPredicted RBP14.81□□□□□ -0.04
DDX55-206ENST00000539934 ARFGEF1Q9Y6D6 1849 aa14.81□□□□□ -0.04
DDX55-206ENST00000539934 CNTNAP4Q9C0A0 1308 aa14.81□□□□□ -0.04
DDX55-206ENST00000539934 ADRA2BP18089 450 aa14.81□□□□□ -0.04
DDX55-206ENST00000539934 RC3H1Q5TC82 1133 aaKnown RBP14.81□□□□□ -0.04
DDX55-206ENST00000539934 JAKMIP3Q5VZ66 844 aa14.81□□□□□ -0.04
DDX55-206ENST00000539934 CEP85Q6P2H3 762 aa14.81□□□□□ -0.04
DDX55-206ENST00000539934 SKILP12757 684 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms