RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 ZDHHC9Q9Y397 364 aa6.7□□□□□ -1.34
RAB3GAP1-207ENST00000539493 STRCP1A6NGW2 1772 aa6.7□□□□□ -1.34
RAB3GAP1-207ENST00000539493 DCCP43146 1447 aa6.7□□□□□ -1.34
RAB3GAP1-207ENST00000539493 NCAPD2Q15021 1401 aa6.7□□□□□ -1.34
RAB3GAP1-207ENST00000539493 SNUPNO95149 360 aaKnown RBP6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 HNRNPH1P31943 449 aaKnown RBP6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 TAF7Q15545 349 aaPredicted RBP6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 ELF2Q15723 593 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 ISM2Q6H9L7 571 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 G2E3Q7L622 706 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 TCP11Q8WWU5 503 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 GTF3C6Q969F1 213 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 SRRTQ9BXP5 876 aaKnown RBP6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 IRAK4Q9NWZ3 460 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 CLIP2Q9UDT6 1046 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 ZNF232Q9UNY5 417 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 NSFL1CQ9UNZ2 370 aaKnown RBP6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 ATP10DQ9P241 1426 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 MED1Q15648 1581 aaPredicted RBP6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 ATXN2Q99700 1313 aaKnown RBP6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 CEP135Q66GS9 1140 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 MICALL1Q8N3F8 863 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 CHCHD3Q9NX63 227 aaKnown RBP6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 RGPD2P0DJD1 1756 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 FAM208AQ9UK61 1670 aaKnown RBP6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 PECAM1P16284 738 aaPredicted RBP6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 ATF3P18847 181 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 RBBP5Q15291 538 aaKnown RBP6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 ANKRD45Q5TZF3 282 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 LRRC31Q6UY01 552 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 DZIP3Q86Y13 1208 aaKnown RBP6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 RNF214Q8ND24 703 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 SNRNP27Q8WVK2 155 aaKnown RBP6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 HOMER3Q9NSC5 361 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 SPATS2LQ9NUQ6 558 aaKnown RBP6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 AXIN2Q9Y2T1 843 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 ALS2Q96Q42 1657 aa6.69□□□□□ -1.34
RAB3GAP1-207ENST00000539493 SF3A1Q15459 793 aaKnown RBP6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 HDGFL1Q5TGJ6 251 aa6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 GIMAP7Q8NHV1 300 aa6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 ANKRD24Q8TF21 1146 aa6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 STK31Q9BXU1 1019 aa6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 CEP126Q9P2H0 1117 aa6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 ADAM21Q9UKJ8 722 aa6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 BLOC1S6Q9UL45 172 aa6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 CAMTA1Q9Y6Y1 1673 aa6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 F6X3S4 739 aa6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 NEBLO76041 1014 aa6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 OAS2P29728 719 aaKnown RBP6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 HSPA2P54652 639 aa6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 RASA3Q14644 834 aa6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 CDCA2Q69YH5 1023 aaPredicted RBP6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 FILIP1Q7Z7B0 1213 aa6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 ANKRD18AQ8IVF6 992 aa6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 MICAL1Q8TDZ2 1067 aa6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 CCDC97Q96F63 343 aaPredicted RBP6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 MEIS3Q99687 375 aa6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 LGR6Q9HBX8 967 aa6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 PXDNQ92626 1479 aa6.68□□□□□ -1.34
RAB3GAP1-207ENST00000539493 FLIIQ13045 1269 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 AKAP4Q5JQC9 854 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 CEP85Q6P2H3 762 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 GBP6Q6ZN66 633 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 RPAP2Q8IXW5 612 aaPredicted RBP6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 ANKRD44Q8N8A2 993 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 PRPF38AQ8NAV1 312 aaKnown RBP6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 KAT2BQ92831 832 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 DDX17Q92841 729 aaKnown RBP6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 FAM163AQ96GL9 167 aaPredicted RBP6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 XAGE2Q96GT9 111 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 LZTS2Q9BRK4 669 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 ARGLU1Q9NWB6 273 aaPredicted RBP6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 LMO7Q8WWI1 1683 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 CDKL5O76039 1030 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 TBC1D8O95759 1140 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 CCNHP51946 323 aaPredicted RBP6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 SLC4A10Q6U841 1118 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 NBPF15Q8N660 670 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 NECTIN2Q92692 538 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 DCTPP1Q9H773 170 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 CPSF2Q9P2I0 782 aaKnown RBP6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 AP5Z1O43299 807 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 NEMFO60524 1076 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 CDC25BP30305 580 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 CCT4P50991 539 aaKnown RBP6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 PLEKHO1Q53GL0 409 aaPredicted RBP6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 BMP2KLQ5H9B9 411 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 ZNF530Q6P9A1 599 aaPredicted RBP6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 TMCO3Q6UWJ1 677 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 BICD2Q8TD16 824 aa6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 ZNF396Q96N95 335 aaPredicted RBP6.67□□□□□ -1.34
RAB3GAP1-207ENST00000539493 GOLGA6CA6NDK9 693 aa6.66□□□□□ -1.34
RAB3GAP1-207ENST00000539493 GOLGA6BA6NDN3 693 aa6.66□□□□□ -1.34
RAB3GAP1-207ENST00000539493 GOLGA6DP0CG33 693 aa6.66□□□□□ -1.34
RAB3GAP1-207ENST00000539493 RAB27AP51159 221 aa6.66□□□□□ -1.34
RAB3GAP1-207ENST00000539493 ZC3H6P61129 1189 aaKnown RBP6.66□□□□□ -1.34
RAB3GAP1-207ENST00000539493 SMC1AQ14683 1233 aaKnown RBP6.66□□□□□ -1.34
RAB3GAP1-207ENST00000539493 CTCFLQ8NI51 663 aaPredicted RBP6.66□□□□□ -1.34
RAB3GAP1-207ENST00000539493 MAGEC3Q8TD91 643 aa6.66□□□□□ -1.34
RAB3GAP1-207ENST00000539493 PLEKHG4BQ96PX9 1271 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms