RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 GGT7Q9UJ14 662 aa5.02□□□□□ -1.61
SNHG1-210ENST00000539303 PHF24Q9UPV7 400 aa5.02□□□□□ -1.61
SNHG1-210ENST00000539303 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-210ENST00000539303 CELA3AP09093 270 aa5.01□□□□□ -1.61
SNHG1-210ENST00000539303 EIF2AK2P19525 551 aaKnown RBP5.01□□□□□ -1.61
SNHG1-210ENST00000539303 MX2P20592 715 aa5.01□□□□□ -1.61
SNHG1-210ENST00000539303 PTPN12Q05209 780 aaKnown RBP5.01□□□□□ -1.61
SNHG1-210ENST00000539303 MAP3K11Q16584 847 aa5.01□□□□□ -1.61
SNHG1-210ENST00000539303 FOXR1Q6PIV2 292 aa5.01□□□□□ -1.61
SNHG1-210ENST00000539303 TPTE2Q6XPS3 522 aa5.01□□□□□ -1.61
SNHG1-210ENST00000539303 HS2ST1Q7LGA3 356 aa5.01□□□□□ -1.61
SNHG1-210ENST00000539303 ERMP1Q7Z2K6 904 aa5.01□□□□□ -1.61
SNHG1-210ENST00000539303 NXPE3Q969Y0 559 aa5.01□□□□□ -1.61
SNHG1-210ENST00000539303 TGIF2Q9GZN2 237 aa5.01□□□□□ -1.61
SNHG1-210ENST00000539303 MUC3BQ9H195 1237 aa5.01□□□□□ -1.61
SNHG1-210ENST00000539303 CAPN10Q9HC96 672 aa5.01□□□□□ -1.61
SNHG1-210ENST00000539303 DDX41Q9UJV9 622 aaKnown RBP5.01□□□□□ -1.61
SNHG1-210ENST00000539303 SLC6A14Q9UN76 642 aa5.01□□□□□ -1.61
SNHG1-210ENST00000539303 PDE2AO00408 941 aaPredicted RBP5□□□□□ -1.61
SNHG1-210ENST00000539303 ITGAEP38570 1179 aa5□□□□□ -1.61
SNHG1-210ENST00000539303 ST13P50502 369 aaKnown RBP5□□□□□ -1.61
SNHG1-210ENST00000539303 ZNF157P51786 506 aaPredicted RBP5□□□□□ -1.61
SNHG1-210ENST00000539303 FAAP100Q0VG06 881 aa5□□□□□ -1.61
SNHG1-210ENST00000539303 CCDC85BQ15834 202 aaPredicted RBP5□□□□□ -1.61
SNHG1-210ENST00000539303 PERM1Q5SV97 790 aa5□□□□□ -1.61
SNHG1-210ENST00000539303 FAM35AQ86V20 835 aa5□□□□□ -1.61
SNHG1-210ENST00000539303 FCHSD1Q86WN1 690 aa5□□□□□ -1.61
SNHG1-210ENST00000539303 TMEM102Q8N9M5 508 aaPredicted RBP5□□□□□ -1.61
SNHG1-210ENST00000539303 POP1Q99575 1024 aaKnown RBP5□□□□□ -1.61
SNHG1-210ENST00000539303 PBX4Q9BYU1 374 aa5□□□□□ -1.61
SNHG1-210ENST00000539303 BHLHE41Q9C0J9 482 aaPredicted RBP5□□□□□ -1.61
SNHG1-210ENST00000539303 CCSER2Q9H7U1 834 aa5□□□□□ -1.61
SNHG1-210ENST00000539303 EFCC1Q9HA90 598 aa5□□□□□ -1.61
SNHG1-210ENST00000539303 KBTBD4Q9NVX7 518 aa5□□□□□ -1.61
SNHG1-210ENST00000539303 NXF1Q9UBU9 619 aaKnown RBP5□□□□□ -1.61
SNHG1-210ENST00000539303 TRIM33Q9UPN9 1127 aa5□□□□□ -1.61
SNHG1-210ENST00000539303 TRAK1Q9UPV9 953 aa5□□□□□ -1.61
SNHG1-210ENST00000539303 ERBB4Q15303 1308 aa4.99□□□□□ -1.61
SNHG1-210ENST00000539303 A0A096LPE4 126 aa4.99□□□□□ -1.61
SNHG1-210ENST00000539303 A0A1W2PPZ6 126 aa4.99□□□□□ -1.61
SNHG1-210ENST00000539303 NEURL1BA8MQ27 555 aa4.99□□□□□ -1.61
SNHG1-210ENST00000539303 SIN3BO75182 1162 aa4.99□□□□□ -1.61
SNHG1-210ENST00000539303 PAGE1O75459 146 aa4.99□□□□□ -1.61
SNHG1-210ENST00000539303 GHRHP01286 108 aa4.99□□□□□ -1.61
SNHG1-210ENST00000539303 ITPKAP23677 461 aa4.99□□□□□ -1.61
SNHG1-210ENST00000539303 ADH7P40394 386 aa4.99□□□□□ -1.61
SNHG1-210ENST00000539303 KRT76Q01546 638 aa4.99□□□□□ -1.61
SNHG1-210ENST00000539303 NEUROD1Q13562 356 aa4.99□□□□□ -1.61
SNHG1-210ENST00000539303 CEP135Q66GS9 1140 aa4.99□□□□□ -1.61
SNHG1-210ENST00000539303 SREK1Q8WXA9 508 aaKnown RBP4.99□□□□□ -1.61
SNHG1-210ENST00000539303 SPACA7Q96KW9 195 aa4.99□□□□□ -1.61
SNHG1-210ENST00000539303 MDFIQ99750 246 aa4.99□□□□□ -1.61
SNHG1-210ENST00000539303 LPIN3Q9BQK8 851 aa4.99□□□□□ -1.61
SNHG1-210ENST00000539303 SMG9Q9H0W8 520 aaKnown RBP4.99□□□□□ -1.61
SNHG1-210ENST00000539303 PPP1R1BQ9UD71 204 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-210ENST00000539303 TLR6Q9Y2C9 796 aa4.99□□□□□ -1.61
SNHG1-210ENST00000539303 MINDY4BA8MYZ0 360 aa4.98□□□□□ -1.61
SNHG1-210ENST00000539303 H3BM21 787 aa4.98□□□□□ -1.61
SNHG1-210ENST00000539303 ENC1O14682 589 aa4.98□□□□□ -1.61
SNHG1-210ENST00000539303 RASIP1Q5U651 963 aa4.98□□□□□ -1.61
SNHG1-210ENST00000539303 TNFRSF25Q93038 417 aa4.98□□□□□ -1.61
SNHG1-210ENST00000539303 PLD4Q96BZ4 506 aa4.98□□□□□ -1.61
SNHG1-210ENST00000539303 COL25A1Q9BXS0 654 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-210ENST00000539303 LACRTQ9GZZ8 138 aa4.98□□□□□ -1.61
SNHG1-210ENST00000539303 ZNF576Q9H609 170 aa4.98□□□□□ -1.61
SNHG1-210ENST00000539303 SEC31BQ9NQW1 1179 aa4.98□□□□□ -1.61
SNHG1-210ENST00000539303 SH2B1Q9NRF2 756 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-210ENST00000539303 ADAMTS1Q9UHI8 967 aa4.98□□□□□ -1.61
SNHG1-210ENST00000539303 GGA1Q9UJY5 639 aa4.98□□□□□ -1.61
SNHG1-210ENST00000539303 IGF1RP08069 1367 aa4.97□□□□□ -1.61
SNHG1-210ENST00000539303 ADH6P28332 368 aa4.97□□□□□ -1.61
SNHG1-210ENST00000539303 PAK2Q13177 524 aa4.97□□□□□ -1.61
SNHG1-210ENST00000539303 HGSNATQ68CP4 663 aa4.97□□□□□ -1.61
SNHG1-210ENST00000539303 PSAPL1Q6NUJ1 521 aa4.97□□□□□ -1.61
SNHG1-210ENST00000539303 C1orf229Q6ZS94 237 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-210ENST00000539303 NPAS3Q8IXF0 933 aa4.97□□□□□ -1.61
SNHG1-210ENST00000539303 ZNF654Q8IZM8 581 aa4.97□□□□□ -1.61
SNHG1-210ENST00000539303 NUDT8Q8WV74 236 aa4.97□□□□□ -1.61
SNHG1-210ENST00000539303 NECAB3Q96P71 396 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-210ENST00000539303 NOC4LQ9BVI4 516 aaKnown RBP4.97□□□□□ -1.61
SNHG1-210ENST00000539303 MBIPQ9NS73 344 aa4.97□□□□□ -1.61
SNHG1-210ENST00000539303 PPP4R2Q9NY27 417 aa4.97□□□□□ -1.61
SNHG1-210ENST00000539303 INPP5FQ9Y2H2 1132 aa4.97□□□□□ -1.61
SNHG1-210ENST00000539303 ARAFP10398 606 aa4.96□□□□□ -1.62
SNHG1-210ENST00000539303 XRCC5P13010 732 aaKnown RBP4.96□□□□□ -1.62
SNHG1-210ENST00000539303 CDC25BP30305 580 aa4.96□□□□□ -1.62
SNHG1-210ENST00000539303 DNAJA1P31689 397 aaKnown RBP4.96□□□□□ -1.62
SNHG1-210ENST00000539303 GBP2P32456 591 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-210ENST00000539303 FAM160A1Q05DH4 1040 aa4.96□□□□□ -1.62
SNHG1-210ENST00000539303 ZNF423Q2M1K9 1284 aa4.96□□□□□ -1.62
SNHG1-210ENST00000539303 LCE2CQ5TA81 110 aa4.96□□□□□ -1.62
SNHG1-210ENST00000539303 GDF6Q6KF10 455 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-210ENST00000539303 ELMSAN1Q6PJG2 1045 aa4.96□□□□□ -1.62
SNHG1-210ENST00000539303 TXNDC11Q6PKC3 985 aa4.96□□□□□ -1.62
SNHG1-210ENST00000539303 C8orf86Q6ZUL3 223 aa4.96□□□□□ -1.62
SNHG1-210ENST00000539303 VN1R5Q7Z5H4 357 aa4.96□□□□□ -1.62
SNHG1-210ENST00000539303 STK35Q8TDR2 534 aa4.96□□□□□ -1.62
SNHG1-210ENST00000539303 RHOVQ96L33 236 aa4.96□□□□□ -1.62
SNHG1-210ENST00000539303 DRC1Q96MC2 740 aa4.96□□□□□ -1.62
SNHG1-210ENST00000539303 PRKAG2Q9UGJ0 569 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms