RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 ANKRD44Q8N8A2 993 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 CEP120Q8N960 986 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 SPAG5Q96R06 1193 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 RBM42Q9BTD8 480 aaKnown RBP7.83□□□□□ -1.16
SORT1-209ENST00000538502 UBA5Q9GZZ9 404 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 FAM184BQ9ULE4 1060 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 ZNF652Q9Y2D9 606 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 ZEB2O60315 1214 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 CASQ2O14958 399 aaPredicted RBP7.82□□□□□ -1.16
SORT1-209ENST00000538502 UQCRFS1P1P0C7P4 283 aa7.82□□□□□ -1.16
SORT1-209ENST00000538502 PDE4BQ07343 736 aa7.82□□□□□ -1.16
SORT1-209ENST00000538502 BICDL1Q6ZP65 573 aa7.82□□□□□ -1.16
SORT1-209ENST00000538502 MFSD6Q6ZSS7 791 aa7.82□□□□□ -1.16
SORT1-209ENST00000538502 NEK11Q8NG66 645 aa7.82□□□□□ -1.16
SORT1-209ENST00000538502 CSRNP2Q9H175 543 aa7.82□□□□□ -1.16
SORT1-209ENST00000538502 POLR3DP05423 398 aaPredicted RBP7.82□□□□□ -1.16
SORT1-209ENST00000538502 TRPC3Q13507 836 aa7.82□□□□□ -1.16
SORT1-209ENST00000538502 GTF3C6Q969F1 213 aa7.82□□□□□ -1.16
SORT1-209ENST00000538502 ZFP91Q96JP5 570 aaPredicted RBP7.82□□□□□ -1.16
SORT1-209ENST00000538502 EPRSP07814 1512 aaKnown RBP7.82□□□□□ -1.16
SORT1-209ENST00000538502 GOLGA8KD6RF30 607 aa7.82□□□□□ -1.16
SORT1-209ENST00000538502 TBCAO75347 108 aaKnown RBP7.82□□□□□ -1.16
SORT1-209ENST00000538502 ATP6V1AP38606 617 aa7.82□□□□□ -1.16
SORT1-209ENST00000538502 RASSF2P50749 326 aa7.82□□□□□ -1.16
SORT1-209ENST00000538502 ALG1Q9BT22 464 aa7.82□□□□□ -1.16
SORT1-209ENST00000538502 IFNKQ9P0W0 207 aa7.82□□□□□ -1.16
SORT1-209ENST00000538502 THOC2Q8NI27 1593 aaKnown RBP7.82□□□□□ -1.16
SORT1-209ENST00000538502 DNM1Q05193 864 aaKnown RBP7.82□□□□□ -1.16
SORT1-209ENST00000538502 GOLGA5Q8TBA6 731 aa7.82□□□□□ -1.16
SORT1-209ENST00000538502 BCAP29Q9UHQ4 241 aa7.82□□□□□ -1.16
SORT1-209ENST00000538502 AOX1Q06278 1338 aa7.82□□□□□ -1.16
SORT1-209ENST00000538502 KRT13P13646 458 aa7.82□□□□□ -1.16
SORT1-209ENST00000538502 PDE1AP54750 535 aa7.82□□□□□ -1.16
SORT1-209ENST00000538502 ACTN4O43707 911 aaKnown RBP7.81□□□□□ -1.16
SORT1-209ENST00000538502 DMTNQ08495 405 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 FLIIQ13045 1269 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 IFIT5Q13325 482 aaKnown RBP7.81□□□□□ -1.16
SORT1-209ENST00000538502 NAP1L4Q99733 375 aaKnown RBP7.81□□□□□ -1.16
SORT1-209ENST00000538502 SLC26A6Q9BXS9 759 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 ZNF75DP51815 510 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 CALCOCO2Q13137 446 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 NEDD9Q14511 834 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 TCERG1LQ5VWI1 586 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 RAB3IL1Q8TBN0 382 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 DRC1Q96MC2 740 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 PPP1R9BQ96SB3 815 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 LLPHQ9BRT6 129 aaKnown RBP7.81□□□□□ -1.16
SORT1-209ENST00000538502 KAT14Q9H8E8 782 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 MACROD2A1Z1Q3 448 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 ZBTB43O43298 467 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 RHOXF2BP0C7M4 288 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 FAM160A1Q05DH4 1040 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 CCDC14Q49A88 953 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 DZIP1Q86YF9 867 aaKnown RBP7.81□□□□□ -1.16
SORT1-209ENST00000538502 RHOXF2Q9BQY4 288 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 CLSTN2Q9H4D0 955 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 CWC25Q9NXE8 425 aaPredicted RBP7.81□□□□□ -1.16
SORT1-209ENST00000538502 PUF60Q9UHX1 559 aaKnown RBP7.81□□□□□ -1.16
SORT1-209ENST00000538502 PABPN1LA6NDY0 278 aaKnown RBP7.81□□□□□ -1.16
SORT1-209ENST00000538502 CALML3P27482 149 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 UBXN1Q04323 297 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 MCMDC2Q4G0Z9 681 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 CEP85LQ5SZL2 805 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 RABGAP1Q9Y3P9 1069 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 MINDY4BA8MYZ0 360 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 ZNF853P0CG23 659 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 SEL1L2Q5TEA6 688 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 FCHSD1Q86WN1 690 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 RUFY3Q7L099 469 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 SYCP3Q8IZU3 236 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 RBSNQ9H1K0 784 aa7.81□□□□□ -1.16
SORT1-209ENST00000538502 UTP11Q9Y3A2 253 aaKnown RBP7.81□□□□□ -1.16
SORT1-209ENST00000538502 PARD3Q8TEW0 1356 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 ARHGAP6O43182 974 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 RANBP6O60518 1105 aaKnown RBP7.8□□□□□ -1.16
SORT1-209ENST00000538502 OAS2P29728 719 aaKnown RBP7.8□□□□□ -1.16
SORT1-209ENST00000538502 PAK2Q13177 524 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 SPTY2D1Q68D10 685 aaPredicted RBP7.8□□□□□ -1.16
SORT1-209ENST00000538502 CCDC51Q96ER9 411 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 MYD88Q99836 296 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 GUCA1BQ9UMX6 200 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 RBM8AQ9Y5S9 174 aaKnown RBP7.8□□□□□ -1.16
SORT1-209ENST00000538502 PIK3C2GO75747 1445 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 GOLGA6BA6NDN3 693 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 APBA1Q02410 837 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 WTAPQ15007 396 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 RNF10Q8N5U6 811 aaKnown RBP7.8□□□□□ -1.16
SORT1-209ENST00000538502 UBLCP1Q8WVY7 318 aaPredicted RBP7.8□□□□□ -1.16
SORT1-209ENST00000538502 TMOD2Q9NZR1 351 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 U2AF2P26368 475 aaKnown RBP eCLIP7.8□□□□□ -1.161e-8■■□□□ 12.2
SORT1-209ENST00000538502 MAP7Q14244 749 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 RHPN1Q8TCX5 695 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 UTP14AQ9BVJ6 771 aaKnown RBP7.8□□□□□ -1.16
SORT1-209ENST00000538502 KLF18A0A0U1RQI7 1052 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 WHAMMP3Q1A5X7 153 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 MAP3K21Q5TCX8 1036 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 C8orf74Q6P047 294 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 TMTC1Q8IUR5 882 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 TCHPQ9BT92 498 aa7.8□□□□□ -1.16
SORT1-209ENST00000538502 CCDC8Q9H0W5 538 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms