RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 GJB2P29033 226 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 CBX1P83916 185 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 TYRO3Q06418 890 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 MTX1Q13505 466 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 TAF7Q15545 349 aaPredicted RBP6.81□□□□□ -1.32
CHD4-206ENST00000536999 STX1AQ16623 288 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 NOM1Q5C9Z4 860 aaKnown RBP6.81□□□□□ -1.32
CHD4-206ENST00000536999 BLOC1S2Q6QNY1 142 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 CCDC73Q6ZRK6 1079 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 PLA2G4DQ86XP0 818 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 CEP57L1Q8IYX8 460 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 TXLNBQ8N3L3 684 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 GOLGA6L1Q8N7Z2 621 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 SPDYE1Q8NFV5 336 aaPredicted RBP6.81□□□□□ -1.32
CHD4-206ENST00000536999 DDX54Q8TDD1 881 aaKnown RBP6.81□□□□□ -1.32
CHD4-206ENST00000536999 BPIFA3Q9BQP9 254 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 CLSTN2Q9H4D0 955 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 TTC12Q9H892 705 aaPredicted RBP6.81□□□□□ -1.32
CHD4-206ENST00000536999 SNRKQ9NRH2 765 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 NLRP2Q9NX02 1062 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 CLIP2Q9UDT6 1046 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 HOOK1Q9UJC3 728 aaKnown RBP6.81□□□□□ -1.32
CHD4-206ENST00000536999 SNX14Q9Y5W7 946 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 USP31Q70CQ4 1352 aa6.81□□□□□ -1.32
CHD4-206ENST00000536999 H3BQV1 296 aa6.8□□□□□ -1.32
CHD4-206ENST00000536999 POTEB2H3BUK9 544 aa6.8□□□□□ -1.32
CHD4-206ENST00000536999 ZSCAN12O43309 604 aa6.8□□□□□ -1.32
CHD4-206ENST00000536999 FIBPO43427 364 aa6.8□□□□□ -1.32
CHD4-206ENST00000536999 KINO60870 393 aaKnown RBP6.8□□□□□ -1.32
CHD4-206ENST00000536999 SURF6O75683 361 aaKnown RBP6.8□□□□□ -1.32
CHD4-206ENST00000536999 DDX58O95786 925 aaKnown RBP6.8□□□□□ -1.32
CHD4-206ENST00000536999 CASTP20810 708 aaKnown RBP6.8□□□□□ -1.32
CHD4-206ENST00000536999 VEGFBP49765 207 aa6.8□□□□□ -1.32
CHD4-206ENST00000536999 ZNF75DP51815 510 aa6.8□□□□□ -1.32
CHD4-206ENST00000536999 AK2P54819 239 aa6.8□□□□□ -1.32
CHD4-206ENST00000536999 TGFB2P61812 414 aa6.8□□□□□ -1.32
CHD4-206ENST00000536999 OS9Q13438 667 aaPredicted RBP6.8□□□□□ -1.32
CHD4-206ENST00000536999 NAA16Q6N069 864 aaPredicted RBP6.8□□□□□ -1.32
CHD4-206ENST00000536999 FCHSD1Q86WN1 690 aa6.8□□□□□ -1.32
CHD4-206ENST00000536999 RHPN1Q8TCX5 695 aa6.8□□□□□ -1.32
CHD4-206ENST00000536999 AK7Q96M32 723 aa6.8□□□□□ -1.32
CHD4-206ENST00000536999 CTNNA3Q9UI47 895 aa6.8□□□□□ -1.32
CHD4-206ENST00000536999 MTMR6Q9Y217 621 aa6.8□□□□□ -1.32
CHD4-206ENST00000536999 FLT4P35916 1363 aa6.8□□□□□ -1.32
CHD4-206ENST00000536999 KDRP35968 1356 aa6.8□□□□□ -1.32
CHD4-206ENST00000536999 PKD1L3Q7Z443 1732 aa6.79□□□□□ -1.32
CHD4-206ENST00000536999 CACNA1FO60840 1977 aa6.79□□□□□ -1.32
CHD4-206ENST00000536999 MAP2K1Q02750 393 aaPredicted RBP6.79□□□□□ -1.32
CHD4-206ENST00000536999 EIF4A2Q14240 407 aaKnown RBP6.79□□□□□ -1.32
CHD4-206ENST00000536999 TERF2Q15554 542 aa6.79□□□□□ -1.32
CHD4-206ENST00000536999 CT47A1Q5JQC4 288 aaPredicted RBP6.79□□□□□ -1.32
CHD4-206ENST00000536999 ZSCAN25Q6NSZ9 544 aa6.79□□□□□ -1.32
CHD4-206ENST00000536999 CCDC186Q7Z3E2 898 aa6.79□□□□□ -1.32
CHD4-206ENST00000536999 MSL3Q8N5Y2 521 aaKnown RBP6.79□□□□□ -1.32
CHD4-206ENST00000536999 BICD2Q8TD16 824 aa6.79□□□□□ -1.32
CHD4-206ENST00000536999 LSG1Q9H089 658 aaKnown RBP6.79□□□□□ -1.32
CHD4-206ENST00000536999 FAM107BQ9H098 131 aa6.79□□□□□ -1.32
CHD4-206ENST00000536999 ACBD3Q9H3P7 528 aa6.79□□□□□ -1.32
CHD4-206ENST00000536999 CNPY2Q9Y2B0 182 aa6.79□□□□□ -1.32
CHD4-206ENST00000536999 EXOC6BQ9Y2D4 811 aa6.79□□□□□ -1.32
CHD4-206ENST00000536999 COL18A1P39060 1754 aa6.78□□□□□ -1.32
CHD4-206ENST00000536999 SLIT3O75094 1523 aa6.78□□□□□ -1.32
CHD4-206ENST00000536999 VPS37CA5D8V6 355 aaPredicted RBP6.78□□□□□ -1.32
CHD4-206ENST00000536999 APBB1O00213 710 aa6.78□□□□□ -1.32
CHD4-206ENST00000536999 SMARCA5O60264 1052 aaPredicted RBP6.78□□□□□ -1.32
CHD4-206ENST00000536999 GADD45BO75293 160 aaPredicted RBP6.78□□□□□ -1.32
CHD4-206ENST00000536999 SKILP12757 684 aa6.78□□□□□ -1.32
CHD4-206ENST00000536999 DPEP1P16444 411 aa6.78□□□□□ -1.32
CHD4-206ENST00000536999 DNM1Q05193 864 aaKnown RBP6.78□□□□□ -1.32
CHD4-206ENST00000536999 G3BP1Q13283 466 aaKnown RBP eCLIP6.78□□□□□ -1.324e-8■■■■□ 26.3
CHD4-206ENST00000536999 NECTIN1Q15223 517 aa6.78□□□□□ -1.32
CHD4-206ENST00000536999 GIMAP6Q6P9H5 292 aa6.78□□□□□ -1.32
CHD4-206ENST00000536999 TMCO3Q6UWJ1 677 aa6.78□□□□□ -1.32
CHD4-206ENST00000536999 SMIM5Q71RC9 77 aa6.78□□□□□ -1.32
CHD4-206ENST00000536999 ARHGEF25Q86VW2 580 aa6.78□□□□□ -1.32
CHD4-206ENST00000536999 LRRC8AQ8IWT6 810 aa6.78□□□□□ -1.32
CHD4-206ENST00000536999 ZNF710Q8N1W2 664 aa6.78□□□□□ -1.32
CHD4-206ENST00000536999 KCNH5Q8NCM2 988 aa6.78□□□□□ -1.32
CHD4-206ENST00000536999 ERCC4Q92889 916 aaPredicted RBP6.78□□□□□ -1.32
CHD4-206ENST00000536999 MAP4K1Q92918 833 aa6.78□□□□□ -1.32
CHD4-206ENST00000536999 JAKMIP1Q96N16 626 aaKnown RBP6.78□□□□□ -1.32
CHD4-206ENST00000536999 BEGAINQ9BUH8 593 aa6.78□□□□□ -1.32
CHD4-206ENST00000536999 UPF3BQ9BZI7 483 aaKnown RBP6.78□□□□□ -1.32
CHD4-206ENST00000536999 OSBPL5Q9H0X9 879 aaPredicted RBP6.78□□□□□ -1.32
CHD4-206ENST00000536999 IQSEC3Q9UPP2 1182 aaPredicted RBP6.78□□□□□ -1.32
CHD4-206ENST00000536999 EMILIN1Q9Y6C2 1016 aa6.78□□□□□ -1.32
CHD4-206ENST00000536999 ZC3H4Q9UPT8 1303 aaKnown RBP6.77□□□□□ -1.32
CHD4-206ENST00000536999 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.77□□□□□ -1.33
CHD4-206ENST00000536999 A0A1W2PQ27 194 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 A0A1W2PQ64 194 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 A0A1W2PQD8 194 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 GLTPD2A6NH11 291 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 A6NNZ2 444 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 SRGAP3O43295 1099 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 IVLP07476 585 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 MMP10P09238 476 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 SFPQP23246 707 aaKnown RBP eCLIP6.77□□□□□ -1.33
CHD4-206ENST00000536999 MCM3P25205 808 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 NCBP1Q09161 790 aaKnown RBP6.77□□□□□ -1.33
CHD4-206ENST00000536999 TUBB8Q3ZCM7 444 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms