RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 KIF23Q02241 960 aaPredicted RBP14.41□□□□□ -0.1
CLSTN3-206ENST00000535668 DLK2Q6UY11 383 aa14.41□□□□□ -0.1
CLSTN3-206ENST00000535668 ZNF408Q9H9D4 720 aa14.41□□□□□ -0.1
CLSTN3-206ENST00000535668 UNCXA6NJT0 531 aa14.4□□□□□ -0.1
CLSTN3-206ENST00000535668 ZNF157P51786 506 aaPredicted RBP14.4□□□□□ -0.1
CLSTN3-206ENST00000535668 MLLT1Q03111 559 aaPredicted RBP14.4□□□□□ -0.1
CLSTN3-206ENST00000535668 GCKRQ14397 625 aa14.4□□□□□ -0.1
CLSTN3-206ENST00000535668 ANGEL2Q5VTE6 544 aaKnown RBP14.4□□□□□ -0.1
CLSTN3-206ENST00000535668 LINS1Q8NG48 757 aa14.4□□□□□ -0.1
CLSTN3-206ENST00000535668 STK31Q9BXU1 1019 aa14.4□□□□□ -0.1
CLSTN3-206ENST00000535668 ANKRD2Q9GZV1 360 aa14.4□□□□□ -0.1
CLSTN3-206ENST00000535668 GREM2Q9H772 168 aa14.4□□□□□ -0.1
CLSTN3-206ENST00000535668 RNF186Q9NXI6 227 aa14.4□□□□□ -0.1
CLSTN3-206ENST00000535668 IRS2Q9Y4H2 1338 aa14.4□□□□□ -0.1
CLSTN3-206ENST00000535668 TM4SF4P48230 202 aa14.39□□□□□ -0.11
CLSTN3-206ENST00000535668 GRM1Q13255 1194 aa14.39□□□□□ -0.11
CLSTN3-206ENST00000535668 TWISTNBQ3B726 338 aaPredicted RBP14.39□□□□□ -0.11
CLSTN3-206ENST00000535668 MTMR14Q8NCE2 650 aa14.39□□□□□ -0.11
CLSTN3-206ENST00000535668 AKAP11Q9UKA4 1901 aa14.39□□□□□ -0.11
CLSTN3-206ENST00000535668 ASTN2O75129 1339 aaPredicted RBP14.39□□□□□ -0.11
CLSTN3-206ENST00000535668 WNT10BO00744 389 aa14.38□□□□□ -0.11
CLSTN3-206ENST00000535668 SLC34A2O95436 690 aa14.38□□□□□ -0.11
CLSTN3-206ENST00000535668 SLC4A2P04920 1241 aa14.38□□□□□ -0.11
CLSTN3-206ENST00000535668 RBM26Q5T8P6 1007 aaKnown RBP14.38□□□□□ -0.11
CLSTN3-206ENST00000535668 RASAL3Q86YV0 1011 aa14.38□□□□□ -0.11
CLSTN3-206ENST00000535668 WDR63Q8IWG1 891 aa14.38□□□□□ -0.11
CLSTN3-206ENST00000535668 OGFOD1Q8N543 542 aa14.38□□□□□ -0.11
CLSTN3-206ENST00000535668 ZNF428Q96B54 188 aa14.38□□□□□ -0.11
CLSTN3-206ENST00000535668 TSKSQ9UJT2 592 aa14.38□□□□□ -0.11
CLSTN3-206ENST00000535668 WTIPA6NIX2 430 aaPredicted RBP14.37□□□□□ -0.11
CLSTN3-206ENST00000535668 G3V3G9 751 aa14.37□□□□□ -0.11
CLSTN3-206ENST00000535668 FKBP1AP62942 108 aaKnown RBP14.37□□□□□ -0.11
CLSTN3-206ENST00000535668 FLIIQ13045 1269 aa14.37□□□□□ -0.11
CLSTN3-206ENST00000535668 MAP3K11Q16584 847 aa14.37□□□□□ -0.11
CLSTN3-206ENST00000535668 CWF19L2Q2TBE0 894 aaKnown RBP14.37□□□□□ -0.11
CLSTN3-206ENST00000535668 DCAF8Q5TAQ9 597 aa14.37□□□□□ -0.11
CLSTN3-206ENST00000535668 MYH16Q9H6N6 1097 aa14.37□□□□□ -0.11
CLSTN3-206ENST00000535668 COL1A1P02452 1464 aaPredicted RBP14.37□□□□□ -0.11
CLSTN3-206ENST00000535668 TNRC18O15417 2968 aaPredicted RBP14.36□□□□□ -0.11
CLSTN3-206ENST00000535668 VAMP4O75379 141 aa14.36□□□□□ -0.11
CLSTN3-206ENST00000535668 DGKZQ13574 1117 aa14.36□□□□□ -0.11
CLSTN3-206ENST00000535668 PKN2Q16513 984 aaKnown RBP14.36□□□□□ -0.11
CLSTN3-206ENST00000535668 FAM161AQ3B820 660 aa14.36□□□□□ -0.11
CLSTN3-206ENST00000535668 LDLRAD1Q5T700 205 aa14.36□□□□□ -0.11
CLSTN3-206ENST00000535668 G2E3Q7L622 706 aa14.36□□□□□ -0.11
CLSTN3-206ENST00000535668 TXNRD3Q86VQ6 643 aa14.36□□□□□ -0.11
CLSTN3-206ENST00000535668 ZNF804BA4D1E1 1349 aa14.36□□□□□ -0.11
CLSTN3-206ENST00000535668 CCDC85CA6NKD9 419 aa14.35□□□□□ -0.11
CLSTN3-206ENST00000535668 ITGA6P23229 1130 aa14.35□□□□□ -0.11
CLSTN3-206ENST00000535668 IGHMBP2P38935 993 aaKnown RBP14.35□□□□□ -0.11
CLSTN3-206ENST00000535668 NBPF9Q3BBW0 867 aa14.35□□□□□ -0.11
CLSTN3-206ENST00000535668 UBE3BQ7Z3V4 1068 aa14.35□□□□□ -0.11
CLSTN3-206ENST00000535668 DNAAF4Q8WXU2 420 aa14.35□□□□□ -0.11
CLSTN3-206ENST00000535668 TSR2Q969E8 191 aaKnown RBP14.35□□□□□ -0.11
CLSTN3-206ENST00000535668 LAMB1P07942 1786 aa14.34□□□□□ -0.11
CLSTN3-206ENST00000535668 TRPA1O75762 1119 aa14.34□□□□□ -0.11
CLSTN3-206ENST00000535668 IL1R1P14778 569 aa14.34□□□□□ -0.11
CLSTN3-206ENST00000535668 TTLL5Q6EMB2 1281 aa14.34□□□□□ -0.11
CLSTN3-206ENST00000535668 CTU1Q7Z7A3 348 aaKnown RBP14.34□□□□□ -0.11
CLSTN3-206ENST00000535668 JARID2Q92833 1246 aaPredicted RBP14.34□□□□□ -0.11
CLSTN3-206ENST00000535668 PPP2R3BQ9Y5P8 575 aa14.34□□□□□ -0.11
CLSTN3-206ENST00000535668 FOXO4P98177 505 aa14.33□□□□□ -0.12
CLSTN3-206ENST00000535668 CCDC184Q52MB2 194 aa14.33□□□□□ -0.12
CLSTN3-206ENST00000535668 APOBEC3FQ8IUX4 373 aaKnown RBP14.33□□□□□ -0.12
CLSTN3-206ENST00000535668 CCDC85AQ96PX6 553 aaPredicted RBP14.33□□□□□ -0.12
CLSTN3-206ENST00000535668 CD209Q9NNX6 404 aa14.33□□□□□ -0.12
CLSTN3-206ENST00000535668 FANCIQ9NVI1 1328 aa14.33□□□□□ -0.12
CLSTN3-206ENST00000535668 INHBEP58166 350 aa14.32□□□□□ -0.12
CLSTN3-206ENST00000535668 BEND3Q5T5X7 828 aa14.32□□□□□ -0.12
CLSTN3-206ENST00000535668 MPHOSPH8Q99549 860 aa14.32□□□□□ -0.12
CLSTN3-206ENST00000535668 NF2P35240 595 aa14.31□□□□□ -0.12
CLSTN3-206ENST00000535668 CHRNDQ07001 517 aa14.31□□□□□ -0.12
CLSTN3-206ENST00000535668 HDAC9Q9UKV0 1011 aa14.31□□□□□ -0.12
CLSTN3-206ENST00000535668 ANKRD18BA2A2Z9 1011 aa14.3□□□□□ -0.12
CLSTN3-206ENST00000535668 FKBP5Q13451 457 aaPredicted RBP14.3□□□□□ -0.12
CLSTN3-206ENST00000535668 FAM205AQ6ZU69 1335 aa14.3□□□□□ -0.12
CLSTN3-206ENST00000535668 SASH1O94885 1247 aa14.29□□□□□ -0.12
CLSTN3-206ENST00000535668 ALDH1A1P00352 501 aa14.29□□□□□ -0.12
CLSTN3-206ENST00000535668 ZBTB48P10074 688 aaPredicted RBP14.29□□□□□ -0.12
CLSTN3-206ENST00000535668 KLRK1P26718 216 aa14.29□□□□□ -0.12
CLSTN3-206ENST00000535668 SREBF2Q12772 1141 aa14.29□□□□□ -0.12
CLSTN3-206ENST00000535668 CERS5Q8N5B7 392 aa14.29□□□□□ -0.12
CLSTN3-206ENST00000535668 UTYO14607 1347 aa14.29□□□□□ -0.12
CLSTN3-206ENST00000535668 HTTP42858 3142 aa14.28□□□□□ -0.12
CLSTN3-206ENST00000535668 UBE2Q2LH0YL09 131 aa14.28□□□□□ -0.12
CLSTN3-206ENST00000535668 ALDH1L1O75891 902 aa14.28□□□□□ -0.12
CLSTN3-206ENST00000535668 IFIT5Q13325 482 aaKnown RBP14.28□□□□□ -0.12
CLSTN3-206ENST00000535668 SPRYD7Q5W111 196 aa14.28□□□□□ -0.12
CLSTN3-206ENST00000535668 ARMC9Q7Z3E5 817 aa14.28□□□□□ -0.12
CLSTN3-206ENST00000535668 MXD3Q9BW11 206 aa14.28□□□□□ -0.12
CLSTN3-206ENST00000535668 DEFB129Q9H1M3 183 aa14.28□□□□□ -0.12
CLSTN3-206ENST00000535668 A0A1B0GUL6 1792 aa14.27□□□□□ -0.12
CLSTN3-206ENST00000535668 SPDYE2BA6NHP3 402 aa14.27□□□□□ -0.13
CLSTN3-206ENST00000535668 GPR25O00155 361 aa14.27□□□□□ -0.13
CLSTN3-206ENST00000535668 SPDYE6P0CI01 402 aa14.27□□□□□ -0.13
CLSTN3-206ENST00000535668 GTF2IP78347 998 aa14.27□□□□□ -0.13
CLSTN3-206ENST00000535668 PTPN12Q05209 780 aaKnown RBP14.27□□□□□ -0.13
CLSTN3-206ENST00000535668 MOB2Q70IA6 237 aa14.27□□□□□ -0.13
CLSTN3-206ENST00000535668 ZNF296Q8WUU4 475 aaPredicted RBP14.27□□□□□ -0.13
CLSTN3-206ENST00000535668 ECM29Q5VYK3 1845 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms