RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 COA1Q9GZY4 146 aa20.54■□□□□ 0.88
CLSTN3-204ENST00000535313 ZNF804BA4D1E1 1349 aa20.53■□□□□ 0.88
CLSTN3-204ENST00000535313 IFIT5Q13325 482 aaKnown RBP20.53■□□□□ 0.88
CLSTN3-204ENST00000535313 SULF1Q8IWU6 871 aa20.53■□□□□ 0.88
CLSTN3-204ENST00000535313 ADM5C9JUS6 153 aa20.52■□□□□ 0.88
CLSTN3-204ENST00000535313 GRM8O00222 908 aa20.52■□□□□ 0.88
CLSTN3-204ENST00000535313 MAP2K2P36507 400 aa20.52■□□□□ 0.88
CLSTN3-204ENST00000535313 FOXO4P98177 505 aa20.52■□□□□ 0.88
CLSTN3-204ENST00000535313 CHRNDQ07001 517 aa20.52■□□□□ 0.88
CLSTN3-204ENST00000535313 SLC4A10Q6U841 1118 aa20.52■□□□□ 0.88
CLSTN3-204ENST00000535313 FBXW7Q969H0 707 aa20.52■□□□□ 0.88
CLSTN3-204ENST00000535313 GMLQ99445 158 aa20.52■□□□□ 0.88
CLSTN3-204ENST00000535313 GGA3Q9NZ52 723 aa20.52■□□□□ 0.88
CLSTN3-204ENST00000535313 C9orf78Q9NZ63 289 aaPredicted RBP20.52■□□□□ 0.88
CLSTN3-204ENST00000535313 ALDH1L1O75891 902 aa20.51■□□□□ 0.87
CLSTN3-204ENST00000535313 LBX1P52954 281 aa20.51■□□□□ 0.87
CLSTN3-204ENST00000535313 SCARF1Q14162 830 aa20.51■□□□□ 0.87
CLSTN3-204ENST00000535313 DLK2Q6UY11 383 aa20.51■□□□□ 0.87
CLSTN3-204ENST00000535313 SRCIN1Q9C0H9 1055 aa20.51■□□□□ 0.87
CLSTN3-204ENST00000535313 MYOZ2Q9NPC6 264 aa20.51■□□□□ 0.87
CLSTN3-204ENST00000535313 PSME4Q14997 1843 aa20.5■□□□□ 0.87
CLSTN3-204ENST00000535313 E9PSI1 815 aa20.5■□□□□ 0.87
CLSTN3-204ENST00000535313 AOC2O75106 756 aa20.5■□□□□ 0.87
CLSTN3-204ENST00000535313 HUNKP57058 714 aa20.5■□□□□ 0.87
CLSTN3-204ENST00000535313 STRIP1Q5VSL9 837 aa20.5■□□□□ 0.87
CLSTN3-204ENST00000535313 LMBR1LQ6UX01 489 aa20.5■□□□□ 0.87
CLSTN3-204ENST00000535313 TXNRD3Q86VQ6 643 aa20.5■□□□□ 0.87
CLSTN3-204ENST00000535313 C2orf69Q8N8R5 385 aa20.5■□□□□ 0.87
CLSTN3-204ENST00000535313 MYO3BQ8WXR4 1341 aa20.5■□□□□ 0.87
CLSTN3-204ENST00000535313 POLR2AP24928 1970 aaKnown RBP20.49■□□□□ 0.87
CLSTN3-204ENST00000535313 CAPN15O75808 1086 aa20.49■□□□□ 0.87
CLSTN3-204ENST00000535313 CCDC57Q2TAC2 916 aa20.49■□□□□ 0.87
CLSTN3-204ENST00000535313 TAF7LQ5H9L4 462 aa20.49■□□□□ 0.87
CLSTN3-204ENST00000535313 DACT2Q5SW24 774 aa20.49■□□□□ 0.87
CLSTN3-204ENST00000535313 ANGEL2Q5VTE6 544 aaKnown RBP20.49■□□□□ 0.87
CLSTN3-204ENST00000535313 OGFOD1Q8N543 542 aa20.49■□□□□ 0.87
CLSTN3-204ENST00000535313 GBA2Q9HCG7 927 aaPredicted RBP20.49■□□□□ 0.87
CLSTN3-204ENST00000535313 ASTN2O75129 1339 aaPredicted RBP20.49■□□□□ 0.87
CLSTN3-204ENST00000535313 THSD7BQ9C0I4 1608 aa20.49■□□□□ 0.87
CLSTN3-204ENST00000535313 HSPA8P11142 646 aaKnown RBP20.48■□□□□ 0.87
CLSTN3-204ENST00000535313 KLRK1P26718 216 aa20.48■□□□□ 0.87
CLSTN3-204ENST00000535313 EPHA10Q5JZY3 1008 aa20.47■□□□□ 0.87
CLSTN3-204ENST00000535313 TTLL5Q6EMB2 1281 aa20.47■□□□□ 0.87
CLSTN3-204ENST00000535313 MXD3Q9BW11 206 aa20.47■□□□□ 0.87
CLSTN3-204ENST00000535313 TAF5LO75529 589 aa20.46■□□□□ 0.87
CLSTN3-204ENST00000535313 MMP14P50281 582 aa20.46■□□□□ 0.87
CLSTN3-204ENST00000535313 HELBQ8NG08 1087 aaPredicted RBP20.46■□□□□ 0.87
CLSTN3-204ENST00000535313 CDCA5Q96FF9 252 aa20.46■□□□□ 0.87
CLSTN3-204ENST00000535313 PITPNM2Q9BZ72 1349 aa20.46■□□□□ 0.87
CLSTN3-204ENST00000535313 NOGQ13253 232 aa20.45■□□□□ 0.86
CLSTN3-204ENST00000535313 RGMBQ6NW40 437 aa20.45■□□□□ 0.86
CLSTN3-204ENST00000535313 LDHAL6AQ6ZMR3 332 aa20.45■□□□□ 0.86
CLSTN3-204ENST00000535313 MRPL50Q8N5N7 158 aaKnown RBP20.45■□□□□ 0.86
CLSTN3-204ENST00000535313 CD209Q9NNX6 404 aa20.45■□□□□ 0.86
CLSTN3-204ENST00000535313 CNNM1Q9NRU3 951 aa20.45■□□□□ 0.86
CLSTN3-204ENST00000535313 CA12O43570 354 aa20.44■□□□□ 0.86
CLSTN3-204ENST00000535313 BRPF1P55201 1214 aaPredicted RBP20.44■□□□□ 0.86
CLSTN3-204ENST00000535313 GTF2IP78347 998 aa20.44■□□□□ 0.86
CLSTN3-204ENST00000535313 ZNF594Q96JF6 807 aaPredicted RBP20.44■□□□□ 0.86
CLSTN3-204ENST00000535313 HDAC9Q9UKV0 1011 aa20.44■□□□□ 0.86
CLSTN3-204ENST00000535313 PTPRCP08575 1304 aa20.44■□□□□ 0.86
CLSTN3-204ENST00000535313 SNAP23O00161 211 aa20.43■□□□□ 0.86
CLSTN3-204ENST00000535313 SLFN5Q08AF3 891 aa20.43■□□□□ 0.86
CLSTN3-204ENST00000535313 C15orf52Q6ZUT6 534 aaKnown RBP20.43■□□□□ 0.86
CLSTN3-204ENST00000535313 ZNF804AQ7Z570 1209 aa20.43■□□□□ 0.86
CLSTN3-204ENST00000535313 CCDC102AQ96A19 550 aa20.43■□□□□ 0.86
CLSTN3-204ENST00000535313 PLIN1O60240 522 aa20.42■□□□□ 0.86
CLSTN3-204ENST00000535313 ZNF157P51786 506 aaPredicted RBP20.42■□□□□ 0.86
CLSTN3-204ENST00000535313 NBPF9Q3BBW0 867 aa20.42■□□□□ 0.86
CLSTN3-204ENST00000535313 KIAA0825Q8IV33 1275 aa20.42■□□□□ 0.86
CLSTN3-204ENST00000535313 SUCLG2Q96I99 432 aa20.42■□□□□ 0.86
CLSTN3-204ENST00000535313 WNT10BO00744 389 aa20.41■□□□□ 0.86
CLSTN3-204ENST00000535313 NBPF7P0C2Y1 421 aaPredicted RBP20.41■□□□□ 0.86
CLSTN3-204ENST00000535313 SSH1Q8WYL5 1049 aa20.41■□□□□ 0.86
CLSTN3-204ENST00000535313 UTYO14607 1347 aa20.4■□□□□ 0.86
CLSTN3-204ENST00000535313 FKBP1BP68106 108 aa20.4■□□□□ 0.86
CLSTN3-204ENST00000535313 TSKSQ9UJT2 592 aa20.4■□□□□ 0.86
CLSTN3-204ENST00000535313 IRS2Q9Y4H2 1338 aa20.4■□□□□ 0.86
CLSTN3-204ENST00000535313 SASH1O94885 1247 aa20.39■□□□□ 0.85
CLSTN3-204ENST00000535313 IL1R1P14778 569 aa20.39■□□□□ 0.85
CLSTN3-204ENST00000535313 KAZALD1Q96I82 304 aa20.39■□□□□ 0.85
CLSTN3-204ENST00000535313 SCAF8Q9UPN6 1271 aaKnown RBP20.39■□□□□ 0.85
CLSTN3-204ENST00000535313 FAM155AB1AL88 458 aaPredicted RBP20.38■□□□□ 0.85
CLSTN3-204ENST00000535313 CCER2I3L3R5 266 aa20.38■□□□□ 0.85
CLSTN3-204ENST00000535313 ALDH1L2Q3SY69 923 aa20.38■□□□□ 0.85
CLSTN3-204ENST00000535313 CDCA7LQ96GN5 454 aa20.38■□□□□ 0.85
CLSTN3-204ENST00000535313 ZIC5Q96T25 663 aa20.38■□□□□ 0.85
CLSTN3-204ENST00000535313 BICC1Q9H694 974 aaKnown RBP20.38■□□□□ 0.85
CLSTN3-204ENST00000535313 ZNF646O15015 1829 aaPredicted RBP20.38■□□□□ 0.85
CLSTN3-204ENST00000535313 NF2P35240 595 aa20.37■□□□□ 0.85
CLSTN3-204ENST00000535313 UBE4AQ14139 1066 aa20.37■□□□□ 0.85
CLSTN3-204ENST00000535313 SMC4Q9NTJ3 1288 aa20.37■□□□□ 0.85
CLSTN3-204ENST00000535313 SLC10A3P09131 477 aa20.36■□□□□ 0.85
CLSTN3-204ENST00000535313 DLGAP5Q15398 846 aa20.36■□□□□ 0.85
CLSTN3-204ENST00000535313 RABL6Q3YEC7 729 aaPredicted RBP20.36■□□□□ 0.85
CLSTN3-204ENST00000535313 PRAMEF18Q5VWM3 479 aa20.36■□□□□ 0.85
CLSTN3-204ENST00000535313 APOBEC3FQ8IUX4 373 aaKnown RBP20.36■□□□□ 0.85
CLSTN3-204ENST00000535313 A0A1B0GUL6 1792 aa20.36■□□□□ 0.85
CLSTN3-204ENST00000535313 MROH5Q6ZUA9 1318 aa20.35■□□□□ 0.85
CLSTN3-204ENST00000535313 FKBP1AP62942 108 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms