RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 CCDC40Q4G0X9 1142 aa20.13■□□□□ 0.81
PHRF1-205ENST00000533464 AOPEPQ8N6M6 819 aa20.13■□□□□ 0.81
PHRF1-205ENST00000533464 SUCLG2Q96I99 432 aa20.13■□□□□ 0.81
PHRF1-205ENST00000533464 FEZ1Q99689 392 aa20.13■□□□□ 0.81
PHRF1-205ENST00000533464 F8W031 263 aaPredicted RBP20.13■□□□□ 0.81
PHRF1-205ENST00000533464 RXRAP19793 462 aa20.13■□□□□ 0.81
PHRF1-205ENST00000533464 A1BGP04217 495 aa20.13■□□□□ 0.81
PHRF1-205ENST00000533464 GNAQP50148 359 aa20.13■□□□□ 0.81
PHRF1-205ENST00000533464 EIF4A1P60842 406 aaKnown RBP20.13■□□□□ 0.81
PHRF1-205ENST00000533464 TRMT1LQ7Z2T5 733 aaKnown RBP20.12■□□□□ 0.81
PHRF1-205ENST00000533464 FAM227BQ96M60 508 aa20.12■□□□□ 0.81
PHRF1-205ENST00000533464 HELLSQ9NRZ9 838 aa20.12■□□□□ 0.81
PHRF1-205ENST00000533464 FBXO3Q9UK99 471 aa20.12■□□□□ 0.81
PHRF1-205ENST00000533464 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.12■□□□□ 0.812e-6■■■■□ 19.7
PHRF1-205ENST00000533464 ARHGEF5Q12774 1597 aa20.12■□□□□ 0.81
PHRF1-205ENST00000533464 UBAP1LF5GYI3 381 aa20.12■□□□□ 0.81
PHRF1-205ENST00000533464 SSR1P43307 286 aaKnown RBP20.12■□□□□ 0.81
PHRF1-205ENST00000533464 HEATR3Q7Z4Q2 680 aa20.12■□□□□ 0.81
PHRF1-205ENST00000533464 TRIM75PA6NK02 468 aa20.12■□□□□ 0.81
PHRF1-205ENST00000533464 JAKMIP3Q5VZ66 844 aa20.12■□□□□ 0.81
PHRF1-205ENST00000533464 TRIM47Q96LD4 638 aa20.12■□□□□ 0.81
PHRF1-205ENST00000533464 TTC12Q9H892 705 aaPredicted RBP20.12■□□□□ 0.81
PHRF1-205ENST00000533464 SKILP12757 684 aa20.12■□□□□ 0.81
PHRF1-205ENST00000533464 TCERG1LQ5VWI1 586 aa20.12■□□□□ 0.81
PHRF1-205ENST00000533464 SNX14Q9Y5W7 946 aa20.12■□□□□ 0.81
PHRF1-205ENST00000533464 CCDC178Q5BJE1 867 aa20.11■□□□□ 0.81
PHRF1-205ENST00000533464 RRAGBQ5VZM2 374 aa20.11■□□□□ 0.81
PHRF1-205ENST00000533464 CCDC191Q8NCU4 936 aa20.11■□□□□ 0.81
PHRF1-205ENST00000533464 ZNF496Q96IT1 587 aaPredicted RBP20.11■□□□□ 0.81
PHRF1-205ENST00000533464 AOX1Q06278 1338 aa20.11■□□□□ 0.81
PHRF1-205ENST00000533464 KIAA0232Q92628 1395 aa20.11■□□□□ 0.81
PHRF1-205ENST00000533464 CLCN1P35523 988 aa20.11■□□□□ 0.81
PHRF1-205ENST00000533464 NYXQ9GZU5 481 aa20.11■□□□□ 0.81
PHRF1-205ENST00000533464 NSFL1CQ9UNZ2 370 aaKnown RBP20.11■□□□□ 0.81
PHRF1-205ENST00000533464 RTL1A6NKG5 1358 aa20.11■□□□□ 0.81
PHRF1-205ENST00000533464 SLC27A2O14975 620 aa20.1■□□□□ 0.81
PHRF1-205ENST00000533464 CBX1P83916 185 aa20.1■□□□□ 0.81
PHRF1-205ENST00000533464 NOLC1Q14978 699 aaKnown RBP eCLIP20.1■□□□□ 0.81
PHRF1-205ENST00000533464 ZNF594Q96JF6 807 aaPredicted RBP20.1■□□□□ 0.81
PHRF1-205ENST00000533464 MCM9Q9NXL9 1143 aa20.1■□□□□ 0.81
PHRF1-205ENST00000533464 RPS6KB1P23443 525 aa20.1■□□□□ 0.81
PHRF1-205ENST00000533464 GNG11P61952 73 aa20.1■□□□□ 0.81
PHRF1-205ENST00000533464 GCKRQ14397 625 aa20.1■□□□□ 0.81
PHRF1-205ENST00000533464 TAX1BP1Q86VP1 789 aa20.1■□□□□ 0.81
PHRF1-205ENST00000533464 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.1■□□□□ 0.81
PHRF1-205ENST00000533464 CEP135Q66GS9 1140 aa20.1■□□□□ 0.81
PHRF1-205ENST00000533464 GOLGA6L9A6NEM1 432 aa20.1■□□□□ 0.81
PHRF1-205ENST00000533464 ITGA6P23229 1130 aa20.1■□□□□ 0.81
PHRF1-205ENST00000533464 STAT6P42226 847 aa20.1■□□□□ 0.81
PHRF1-205ENST00000533464 RMND1Q9NWS8 449 aa20.1■□□□□ 0.81
PHRF1-205ENST00000533464 ABCC4O15439 1325 aa20.1■□□□□ 0.81
PHRF1-205ENST00000533464 LMOD1P29536 600 aaPredicted RBP20.1■□□□□ 0.81
PHRF1-205ENST00000533464 PAFAH1B1P43034 410 aa20.1■□□□□ 0.81
PHRF1-205ENST00000533464 TAF3Q5VWG9 929 aa20.1■□□□□ 0.81
PHRF1-205ENST00000533464 FAM114A1Q8IWE2 563 aa20.1■□□□□ 0.81
PHRF1-205ENST00000533464 ZKSCAN5Q9Y2L8 839 aa20.1■□□□□ 0.81
PHRF1-205ENST00000533464 IL17REQ8NFR9 667 aa20.09■□□□□ 0.81
PHRF1-205ENST00000533464 EHMT1Q9H9B1 1298 aa20.09■□□□□ 0.81
PHRF1-205ENST00000533464 ARHGEF10O15013 1369 aa20.09■□□□□ 0.81
PHRF1-205ENST00000533464 RTCBQ9Y3I0 505 aaKnown RBP20.09■□□□□ 0.81
PHRF1-205ENST00000533464 KDM6BO15054 1643 aa20.09■□□□□ 0.81
PHRF1-205ENST00000533464 MBD4O95243 580 aa20.09■□□□□ 0.81
PHRF1-205ENST00000533464 EXOC1Q9NV70 894 aa20.09■□□□□ 0.81
PHRF1-205ENST00000533464 PICALMQ13492 652 aa20.09■□□□□ 0.81
PHRF1-205ENST00000533464 DHX58Q96C10 678 aa20.08■□□□□ 0.81
PHRF1-205ENST00000533464 CGNQ9P2M7 1197 aaKnown RBP20.08■□□□□ 0.81
PHRF1-205ENST00000533464 TARBP1Q13395 1621 aaKnown RBP20.08■□□□□ 0.8
PHRF1-205ENST00000533464 ZNF804AQ7Z570 1209 aa20.08■□□□□ 0.8
PHRF1-205ENST00000533464 BRAPQ7Z569 592 aa20.08■□□□□ 0.8
PHRF1-205ENST00000533464 PRIMPOLQ96LW4 560 aa20.08■□□□□ 0.8
PHRF1-205ENST00000533464 ERICH4A6NGS2 130 aa20.07■□□□□ 0.8
PHRF1-205ENST00000533464 KIAA0754O94854 1291 aa20.07■□□□□ 0.8
PHRF1-205ENST00000533464 POTEJP0CG39 1038 aa20.07■□□□□ 0.8
PHRF1-205ENST00000533464 CALM1P0DP23 149 aa20.07■□□□□ 0.8
PHRF1-205ENST00000533464 CALM2P0DP24 149 aa20.07■□□□□ 0.8
PHRF1-205ENST00000533464 CALM3P0DP25 149 aa20.07■□□□□ 0.8
PHRF1-205ENST00000533464 USP44Q9H0E7 712 aa20.07■□□□□ 0.8
PHRF1-205ENST00000533464 JAG2Q9Y219 1238 aa20.07■□□□□ 0.8
PHRF1-205ENST00000533464 NDUFB9Q9Y6M9 179 aa20.07■□□□□ 0.8
PHRF1-205ENST00000533464 SH3TC1Q8TE82 1336 aa20.07■□□□□ 0.8
PHRF1-205ENST00000533464 SEPT7Q16181 437 aaKnown RBP20.07■□□□□ 0.8
PHRF1-205ENST00000533464 LUZP1Q86V48 1076 aa20.07■□□□□ 0.8
PHRF1-205ENST00000533464 DDX17Q92841 729 aaKnown RBP20.07■□□□□ 0.8
PHRF1-205ENST00000533464 ADGBQ8N7X0 1667 aa20.07■□□□□ 0.8
PHRF1-205ENST00000533464 NAPAP54920 295 aa20.07■□□□□ 0.8
PHRF1-205ENST00000533464 MAP9Q49MG5 647 aa20.07■□□□□ 0.8
PHRF1-205ENST00000533464 XAGE2Q96GT9 111 aa20.07■□□□□ 0.8
PHRF1-205ENST00000533464 ZKSCAN3Q9BRR0 538 aa20.07■□□□□ 0.8
PHRF1-205ENST00000533464 NEO1Q92859 1461 aa20.07■□□□□ 0.8
PHRF1-205ENST00000533464 KCNQ3O43525 872 aa20.06■□□□□ 0.8
PHRF1-205ENST00000533464 TRIM21P19474 475 aaKnown RBP20.06■□□□□ 0.8
PHRF1-205ENST00000533464 LRRC27Q9C0I9 530 aa20.06■□□□□ 0.8
PHRF1-205ENST00000533464 PAXBP1Q9Y5B6 917 aa20.06■□□□□ 0.8
PHRF1-205ENST00000533464 PLXNC1O60486 1568 aa20.06■□□□□ 0.8
PHRF1-205ENST00000533464 YEATS2Q9ULM3 1422 aa20.06■□□□□ 0.8
PHRF1-205ENST00000533464 PAF1Q8N7H5 531 aa20.06■□□□□ 0.8
PHRF1-205ENST00000533464 PLEKHF1Q96S99 279 aa20.06■□□□□ 0.8
PHRF1-205ENST00000533464 ZSWIM4Q9H7M6 989 aa20.06■□□□□ 0.8
PHRF1-205ENST00000533464 RTL9Q8NET4 1388 aa20.05■□□□□ 0.8
PHRF1-205ENST00000533464 FAM173BQ6P4H8 233 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms