RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 KIF4BQ2VIQ3 1234 aa14.39□□□□□ -0.11
CLCF1-202ENST00000533438 USP48Q86UV5 1035 aa14.39□□□□□ -0.11
CLCF1-202ENST00000533438 LEMD3Q9Y2U8 911 aa14.39□□□□□ -0.11
CLCF1-202ENST00000533438 FOXO4P98177 505 aa14.38□□□□□ -0.11
CLCF1-202ENST00000533438 MLLT1Q03111 559 aaPredicted RBP14.38□□□□□ -0.11
CLCF1-202ENST00000533438 RBM26Q5T8P6 1007 aaKnown RBP14.38□□□□□ -0.11
CLCF1-202ENST00000533438 USP17L3A6NCW0 530 aa14.37□□□□□ -0.11
CLCF1-202ENST00000533438 USP17L4A6NCW7 530 aa14.37□□□□□ -0.11
CLCF1-202ENST00000533438 DLK2Q6UY11 383 aa14.37□□□□□ -0.11
CLCF1-202ENST00000533438 PAXIP1Q6ZW49 1069 aaPredicted RBP14.37□□□□□ -0.11
CLCF1-202ENST00000533438 USP17L1Q7RTZ2 530 aa14.37□□□□□ -0.11
CLCF1-202ENST00000533438 KRT26Q7Z3Y9 468 aa14.37□□□□□ -0.11
CLCF1-202ENST00000533438 TXNRD3Q86VQ6 643 aa14.37□□□□□ -0.11
CLCF1-202ENST00000533438 DCPSQ96C86 337 aaKnown RBP14.37□□□□□ -0.11
CLCF1-202ENST00000533438 MPHOSPH8Q99549 860 aa14.37□□□□□ -0.11
CLCF1-202ENST00000533438 COA1Q9GZY4 146 aa14.37□□□□□ -0.11
CLCF1-202ENST00000533438 ZNF408Q9H9D4 720 aa14.37□□□□□ -0.11
CLCF1-202ENST00000533438 TNRC18O15417 2968 aaPredicted RBP14.37□□□□□ -0.11
CLCF1-202ENST00000533438 ANKRD18BA2A2Z9 1011 aa14.36□□□□□ -0.11
CLCF1-202ENST00000533438 AOC2O75106 756 aa14.36□□□□□ -0.11
CLCF1-202ENST00000533438 CHRNDQ07001 517 aa14.36□□□□□ -0.11
CLCF1-202ENST00000533438 ANKRD2Q9GZV1 360 aa14.36□□□□□ -0.11
CLCF1-202ENST00000533438 GGA3Q9NZ52 723 aa14.36□□□□□ -0.11
CLCF1-202ENST00000533438 PCDH10Q9P2E7 1040 aa14.36□□□□□ -0.11
CLCF1-202ENST00000533438 ZNF804BA4D1E1 1349 aa14.36□□□□□ -0.11
CLCF1-202ENST00000533438 IRS2Q9Y4H2 1338 aa14.36□□□□□ -0.11
CLCF1-202ENST00000533438 ADM5C9JUS6 153 aa14.35□□□□□ -0.11
CLCF1-202ENST00000533438 GRM8O00222 908 aa14.35□□□□□ -0.11
CLCF1-202ENST00000533438 ALDH1L1O75891 902 aa14.35□□□□□ -0.11
CLCF1-202ENST00000533438 USP17L8P0C7I0 530 aa14.35□□□□□ -0.11
CLCF1-202ENST00000533438 KLRK1P26718 216 aa14.35□□□□□ -0.11
CLCF1-202ENST00000533438 GRM1Q13255 1194 aa14.35□□□□□ -0.11
CLCF1-202ENST00000533438 EPHA10Q5JZY3 1008 aa14.35□□□□□ -0.11
CLCF1-202ENST00000533438 DACT2Q5SW24 774 aa14.35□□□□□ -0.11
CLCF1-202ENST00000533438 MYOZ2Q9NPC6 264 aa14.35□□□□□ -0.11
CLCF1-202ENST00000533438 ASTN2O75129 1339 aaPredicted RBP14.35□□□□□ -0.11
CLCF1-202ENST00000533438 IFIT5Q13325 482 aaKnown RBP14.34□□□□□ -0.11
CLCF1-202ENST00000533438 SCARF1Q14162 830 aa14.34□□□□□ -0.11
CLCF1-202ENST00000533438 STRIP1Q5VSL9 837 aa14.34□□□□□ -0.11
CLCF1-202ENST00000533438 MYO3BQ8WXR4 1341 aa14.34□□□□□ -0.11
CLCF1-202ENST00000533438 CCDC85CA6NKD9 419 aa14.33□□□□□ -0.12
CLCF1-202ENST00000533438 NOGQ13253 232 aa14.33□□□□□ -0.12
CLCF1-202ENST00000533438 ANGEL2Q5VTE6 544 aaKnown RBP14.33□□□□□ -0.12
CLCF1-202ENST00000533438 SLC4A10Q6U841 1118 aa14.33□□□□□ -0.12
CLCF1-202ENST00000533438 LMBR1LQ6UX01 489 aa14.33□□□□□ -0.12
CLCF1-202ENST00000533438 C15orf52Q6ZUT6 534 aaKnown RBP14.33□□□□□ -0.12
CLCF1-202ENST00000533438 SULF1Q8IWU6 871 aa14.33□□□□□ -0.12
CLCF1-202ENST00000533438 MRPL50Q8N5N7 158 aaKnown RBP14.33□□□□□ -0.12
CLCF1-202ENST00000533438 MXD3Q9BW11 206 aa14.33□□□□□ -0.12
CLCF1-202ENST00000533438 SRCIN1Q9C0H9 1055 aa14.33□□□□□ -0.12
CLCF1-202ENST00000533438 MCOLN1Q9GZU1 580 aa14.33□□□□□ -0.12
CLCF1-202ENST00000533438 GBA2Q9HCG7 927 aaPredicted RBP14.33□□□□□ -0.12
CLCF1-202ENST00000533438 PITPNM2Q9BZ72 1349 aa14.33□□□□□ -0.12
CLCF1-202ENST00000533438 E9PSI1 815 aa14.32□□□□□ -0.12
CLCF1-202ENST00000533438 SNAP23O00161 211 aa14.32□□□□□ -0.12
CLCF1-202ENST00000533438 HUNKP57058 714 aa14.32□□□□□ -0.12
CLCF1-202ENST00000533438 SLFN5Q08AF3 891 aa14.32□□□□□ -0.12
CLCF1-202ENST00000533438 C9orf78Q9NZ63 289 aaPredicted RBP14.32□□□□□ -0.12
CLCF1-202ENST00000533438 CHMP3Q9Y3E7 222 aa14.32□□□□□ -0.12
CLCF1-202ENST00000533438 UTYO14607 1347 aa14.32□□□□□ -0.12
CLCF1-202ENST00000533438 ECM29Q5VYK3 1845 aa14.31□□□□□ -0.12
CLCF1-202ENST00000533438 FAM155AB1AL88 458 aaPredicted RBP14.31□□□□□ -0.12
CLCF1-202ENST00000533438 TAF5LO75529 589 aa14.31□□□□□ -0.12
CLCF1-202ENST00000533438 CCDC57Q2TAC2 916 aa14.31□□□□□ -0.12
CLCF1-202ENST00000533438 TTLL5Q6EMB2 1281 aa14.31□□□□□ -0.12
CLCF1-202ENST00000533438 C2orf69Q8N8R5 385 aa14.31□□□□□ -0.12
CLCF1-202ENST00000533438 HELBQ8NG08 1087 aaPredicted RBP14.31□□□□□ -0.12
CLCF1-202ENST00000533438 CDCA5Q96FF9 252 aa14.31□□□□□ -0.12
CLCF1-202ENST00000533438 KAZALD1Q96I82 304 aa14.31□□□□□ -0.12
CLCF1-202ENST00000533438 SUCLG2Q96I99 432 aa14.31□□□□□ -0.12
CLCF1-202ENST00000533438 CD209Q9NNX6 404 aa14.31□□□□□ -0.12
CLCF1-202ENST00000533438 SAGE1Q9NXZ1 904 aa14.31□□□□□ -0.12
CLCF1-202ENST00000533438 PAPPA2Q9BXP8 1791 aa14.31□□□□□ -0.12
CLCF1-202ENST00000533438 KCNJ4P48050 445 aa14.3□□□□□ -0.12
CLCF1-202ENST00000533438 MMP14P50281 582 aa14.3□□□□□ -0.12
CLCF1-202ENST00000533438 NBPF9Q3BBW0 867 aa14.3□□□□□ -0.12
CLCF1-202ENST00000533438 RGMBQ6NW40 437 aa14.3□□□□□ -0.12
CLCF1-202ENST00000533438 FBXW7Q969H0 707 aa14.3□□□□□ -0.12
CLCF1-202ENST00000533438 ZNF594Q96JF6 807 aaPredicted RBP14.3□□□□□ -0.12
CLCF1-202ENST00000533438 PTPRCP08575 1304 aa14.3□□□□□ -0.12
CLCF1-202ENST00000533438 WNT10BO00744 389 aa14.29□□□□□ -0.12
CLCF1-202ENST00000533438 NBPF7P0C2Y1 421 aaPredicted RBP14.29□□□□□ -0.12
CLCF1-202ENST00000533438 GTF2IP78347 998 aa14.29□□□□□ -0.12
CLCF1-202ENST00000533438 LDHAL6AQ6ZMR3 332 aa14.29□□□□□ -0.12
CLCF1-202ENST00000533438 OGFOD1Q8N543 542 aa14.29□□□□□ -0.12
CLCF1-202ENST00000533438 SSH1Q8WYL5 1049 aa14.29□□□□□ -0.12
CLCF1-202ENST00000533438 CCDC102AQ96A19 550 aa14.29□□□□□ -0.12
CLCF1-202ENST00000533438 ZIC5Q96T25 663 aa14.29□□□□□ -0.12
CLCF1-202ENST00000533438 TSKSQ9UJT2 592 aa14.29□□□□□ -0.12
CLCF1-202ENST00000533438 IL1R1P14778 569 aa14.28□□□□□ -0.12
CLCF1-202ENST00000533438 RABL6Q3YEC7 729 aaPredicted RBP14.28□□□□□ -0.12
CLCF1-202ENST00000533438 TAF7LQ5H9L4 462 aa14.28□□□□□ -0.12
CLCF1-202ENST00000533438 TRMT2AQ8IZ69 625 aaKnown RBP14.28□□□□□ -0.12
CLCF1-202ENST00000533438 ARAP2Q8WZ64 1704 aa14.28□□□□□ -0.12
CLCF1-202ENST00000533438 CDCA7LQ96GN5 454 aa14.28□□□□□ -0.12
CLCF1-202ENST00000533438 ZBED3Q96IU2 234 aaPredicted RBP14.28□□□□□ -0.12
CLCF1-202ENST00000533438 AKAP11Q9UKA4 1901 aa14.27□□□□□ -0.12
CLCF1-202ENST00000533438 FKBP1BP68106 108 aa14.27□□□□□ -0.13
CLCF1-202ENST00000533438 ALDH1L2Q3SY69 923 aa14.27□□□□□ -0.13
CLCF1-202ENST00000533438 ZNF804AQ7Z570 1209 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms