RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 SMARCE1Q969G3 411 aa11.44□□□□□ -0.58
CCDC90B-214ENST00000529689 UTP14AQ9BVJ6 771 aaKnown RBP11.44□□□□□ -0.58
CCDC90B-214ENST00000529689 CHD1O14646 1710 aa11.44□□□□□ -0.58
CCDC90B-214ENST00000529689 CYP21A2P08686 494 aa11.44□□□□□ -0.58
CCDC90B-214ENST00000529689 TXLNAP40222 546 aa11.44□□□□□ -0.58
CCDC90B-214ENST00000529689 GSDMDP57764 484 aa11.44□□□□□ -0.58
CCDC90B-214ENST00000529689 AXDND1Q5T1B0 1012 aaPredicted RBP11.44□□□□□ -0.58
CCDC90B-214ENST00000529689 MFSD6Q6ZSS7 791 aa11.44□□□□□ -0.58
CCDC90B-214ENST00000529689 KCNG4Q8TDN1 519 aa11.44□□□□□ -0.58
CCDC90B-214ENST00000529689 GJB4Q9NTQ9 266 aa11.44□□□□□ -0.58
CCDC90B-214ENST00000529689 TET3O43151 1660 aa11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 AOX1Q06278 1338 aa11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 LRRC7Q96NW7 1537 aa11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 POLR1AO95602 1720 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 CCP110O43303 1012 aa11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 TAF5LO75529 589 aa11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 MAP4K1Q92918 833 aa11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 PAXBP1Q9Y5B6 917 aa11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 PNPLA6Q8IY17 1366 aa11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 RNF17Q9BXT8 1623 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 FAM160A1Q05DH4 1040 aa11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 CMTR1Q8N1G2 835 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 GTF3C6Q969F1 213 aa11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 TULP4Q9NRJ4 1543 aa11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 ARHGEF10O15013 1369 aa11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 CCDC66A2RUB6 948 aa11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 ARID5BQ14865 1188 aa11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 CCDC12Q8WUD4 166 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 PUS3Q9BZE2 481 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 TM6SF1Q9BZW5 370 aa11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 GNL3LQ9NVN8 582 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 MAGEC2Q9UBF1 373 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-214ENST00000529689 EYA2O00167 538 aa11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 ZAP70P43403 619 aa11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 EPHA10Q5JZY3 1008 aa11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 CCDC70Q6NSX1 233 aa11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 ACSBG1Q96GR2 724 aa11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 SPHKAPQ2M3C7 1700 aa11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 E7EWF7 191 aa11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 NEMFO60524 1076 aa11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 CASQ1P31415 396 aa11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 ADD1P35611 737 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 HSPA2P54652 639 aa11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 EIF5P55010 431 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 STAMQ92783 540 aa11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 DHX58Q96C10 678 aa11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 TANGO6Q9C0B7 1094 aa11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 DACH1Q9UI36 760 aa11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 ZSCAN12O43309 604 aa11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 PI16Q6UXB8 463 aa11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 SLC52A2Q9HAB3 445 aa11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 LZTFL1Q9NQ48 299 aa11.42□□□□□ -0.58
CCDC90B-214ENST00000529689 PRDM1O75626 825 aa11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 SCRN1Q12765 414 aa11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 ELF2Q15723 593 aa11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 XAGE2Q96GT9 111 aa11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 VAT1LQ9HCJ6 419 aa11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 MRVI1Q9Y6F6 885 aa11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 AK9Q5TCS8 1911 aa11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 GPAA1O43292 621 aa11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 CAVIN2O95810 425 aa11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 HOXB7P09629 217 aa11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 USP5P45974 858 aa11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 NAA30Q147X3 362 aaPredicted RBP11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 DCAF5Q96JK2 942 aa11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 SLC4A4Q9Y6R1 1079 aa11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 ABCC3O15438 1527 aa11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 SLU7O95391 586 aaKnown RBP11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 CYP2E1P05181 493 aaPredicted RBP11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 WTAPQ15007 396 aa11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 GPIHBP1Q8IV16 184 aa11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 WASF1Q92558 559 aa11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 PLIN2Q99541 437 aa11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 NUP88Q99567 741 aaPredicted RBP11.41□□□□□ -0.58
CCDC90B-214ENST00000529689 MLH3Q9UHC1 1453 aa11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 KIF2AO00139 706 aaPredicted RBP11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 ATP5JP18859 108 aa11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 NLRP5P59047 1200 aa11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 IKQ13123 557 aaPredicted RBP11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 MCM6Q14566 821 aa11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 DHX37Q8IY37 1157 aaKnown RBP11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 MAGEB6Q8N7X4 407 aa11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 CACTINQ8WUQ7 758 aaKnown RBP11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 MAPK8IP1Q9UQF2 711 aa11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 USP6P35125 1406 aa11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 GLI2P10070 1586 aa11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 ZNF202O95125 648 aa11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 SLC5A1P13866 664 aa11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 CDK5RAP3Q96JB5 506 aa11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 DEF6Q9H4E7 631 aa11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 TAF6LQ9Y6J9 622 aa11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 CYP7A1P22680 504 aa11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 NECTIN1Q15223 517 aa11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 XPO4Q9C0E2 1151 aaKnown RBP11.4□□□□□ -0.58
CCDC90B-214ENST00000529689 IQCA1Q86XH1 822 aa11.39□□□□□ -0.59
CCDC90B-214ENST00000529689 TRMT44Q8IYL2 757 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-214ENST00000529689 RUFY1Q96T51 708 aa11.39□□□□□ -0.59
CCDC90B-214ENST00000529689 ZNHIT6Q9NWK9 470 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-214ENST00000529689 ZNF215Q9UL58 517 aaPredicted RBP11.39□□□□□ -0.59
CCDC90B-214ENST00000529689 KCNJ14Q9UNX9 436 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms