RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 CDC45O75419 566 aa17.59■□□□□ 0.41
NR1H3-231ENST00000529540 IFIT1P09914 478 aaKnown RBP17.59■□□□□ 0.41
NR1H3-231ENST00000529540 CHRNA5P30532 468 aa17.59■□□□□ 0.41
NR1H3-231ENST00000529540 ATP2B3Q16720 1220 aa17.59■□□□□ 0.41
NR1H3-231ENST00000529540 SOGA3Q5TF21 947 aa17.59■□□□□ 0.41
NR1H3-231ENST00000529540 PIM2Q9P1W9 311 aa17.59■□□□□ 0.41
NR1H3-231ENST00000529540 LEMD3Q9Y2U8 911 aa17.59■□□□□ 0.41
NR1H3-231ENST00000529540 AOX1Q06278 1338 aa17.59■□□□□ 0.41
NR1H3-231ENST00000529540 TTC41PQ6P2S7 1318 aa17.59■□□□□ 0.41
NR1H3-231ENST00000529540 SPEF2Q9C093 1822 aa17.59■□□□□ 0.41
NR1H3-231ENST00000529540 A0A1B0GUL7 405 aa17.58■□□□□ 0.41
NR1H3-231ENST00000529540 ESPNB1AK53 854 aa17.58■□□□□ 0.41
NR1H3-231ENST00000529540 SMARCA5O60264 1052 aaPredicted RBP17.58■□□□□ 0.41
NR1H3-231ENST00000529540 SLC5A1P13866 664 aa17.58■□□□□ 0.41
NR1H3-231ENST00000529540 KCNJ4P48050 445 aa17.58■□□□□ 0.41
NR1H3-231ENST00000529540 PRPF40BQ6NWY9 871 aaKnown RBP17.58■□□□□ 0.41
NR1H3-231ENST00000529540 PODXL2Q9NZ53 605 aa17.58■□□□□ 0.41
NR1H3-231ENST00000529540 PPP1R1BQ9UD71 204 aaPredicted RBP17.58■□□□□ 0.41
NR1H3-231ENST00000529540 LRRC37AA6NMS7 1700 aa17.58■□□□□ 0.4
NR1H3-231ENST00000529540 DPEP1P16444 411 aa17.58■□□□□ 0.4
NR1H3-231ENST00000529540 MX1P20591 662 aa17.58■□□□□ 0.4
NR1H3-231ENST00000529540 EAF2Q96CJ1 260 aaPredicted RBP17.58■□□□□ 0.4
NR1H3-231ENST00000529540 ANKIB1Q9P2G1 1089 aa17.58■□□□□ 0.4
NR1H3-231ENST00000529540 ERC2O15083 957 aa17.57■□□□□ 0.4
NR1H3-231ENST00000529540 KLHL34Q8N239 644 aa17.57■□□□□ 0.4
NR1H3-231ENST00000529540 OSBPL3Q9H4L5 887 aa17.57■□□□□ 0.4
NR1H3-231ENST00000529540 ATP2B4P23634 1241 aa17.56■□□□□ 0.4
NR1H3-231ENST00000529540 NEUROD6Q96NK8 337 aa17.56■□□□□ 0.4
NR1H3-231ENST00000529540 NAP1L5Q96NT1 182 aaPredicted RBP17.56■□□□□ 0.4
NR1H3-231ENST00000529540 STAP2Q9UGK3 403 aa17.56■□□□□ 0.4
NR1H3-231ENST00000529540 A0A0G2JLW4 131 aa17.55■□□□□ 0.4
NR1H3-231ENST00000529540 CD2BP2O95400 341 aaKnown RBP17.55■□□□□ 0.4
NR1H3-231ENST00000529540 FGFR2P21802 821 aa17.55■□□□□ 0.4
NR1H3-231ENST00000529540 KCNA3P22001 575 aa17.55■□□□□ 0.4
NR1H3-231ENST00000529540 CCDC158Q5M9N0 1113 aa17.55■□□□□ 0.4
NR1H3-231ENST00000529540 GORABQ5T7V8 394 aa17.55■□□□□ 0.4
NR1H3-231ENST00000529540 GAS2L3Q86XJ1 694 aa17.55■□□□□ 0.4
NR1H3-231ENST00000529540 ECHDC1Q9NTX5 307 aa17.55■□□□□ 0.4
NR1H3-231ENST00000529540 GGA1Q9UJY5 639 aa17.55■□□□□ 0.4
NR1H3-231ENST00000529540 TAF1P21675 1872 aa17.55■□□□□ 0.4
NR1H3-231ENST00000529540 COL4A1P02462 1669 aa17.55■□□□□ 0.4
NR1H3-231ENST00000529540 GOLGA6L22H0YM25 854 aa17.55■□□□□ 0.4
NR1H3-231ENST00000529540 DALRD3Q5D0E6 543 aaKnown RBP17.55■□□□□ 0.4
NR1H3-231ENST00000529540 PLEKHM2Q8IWE5 1019 aa17.55■□□□□ 0.4
NR1H3-231ENST00000529540 NSFL1CQ9UNZ2 370 aaKnown RBP17.55■□□□□ 0.4
NR1H3-231ENST00000529540 ZNF804BA4D1E1 1349 aa17.54■□□□□ 0.4
NR1H3-231ENST00000529540 SALL3Q9BXA9 1300 aa17.54■□□□□ 0.4
NR1H3-231ENST00000529540 KIAA1551Q9HCM1 1747 aa17.54■□□□□ 0.4
NR1H3-231ENST00000529540 TAF5LO75529 589 aa17.54■□□□□ 0.4
NR1H3-231ENST00000529540 GLRX3O76003 335 aaKnown RBP17.54■□□□□ 0.4
NR1H3-231ENST00000529540 PDE1AP54750 535 aa17.54■□□□□ 0.4
NR1H3-231ENST00000529540 RABEP1Q15276 862 aa17.54■□□□□ 0.4
NR1H3-231ENST00000529540 CAVIN4Q5BKX8 364 aa17.54■□□□□ 0.4
NR1H3-231ENST00000529540 MPNDQ8N594 471 aa17.54■□□□□ 0.4
NR1H3-231ENST00000529540 HELBQ8NG08 1087 aaPredicted RBP17.54■□□□□ 0.4
NR1H3-231ENST00000529540 PPP1R9BQ96SB3 815 aa17.54■□□□□ 0.4
NR1H3-231ENST00000529540 CCDC8Q9H0W5 538 aaPredicted RBP17.54■□□□□ 0.4
NR1H3-231ENST00000529540 DBNLQ9UJU6 430 aaKnown RBP17.54■□□□□ 0.4
NR1H3-231ENST00000529540 A0A1B0GUL6 1792 aa17.54■□□□□ 0.4
NR1H3-231ENST00000529540 HSP90AA1P07900 732 aaKnown RBP17.53■□□□□ 0.4
NR1H3-231ENST00000529540 TIMM10P62072 90 aa17.53■□□□□ 0.4
NR1H3-231ENST00000529540 CCDC173Q0VFZ6 552 aa17.53■□□□□ 0.4
NR1H3-231ENST00000529540 KLHL40Q2TBA0 621 aa17.53■□□□□ 0.4
NR1H3-231ENST00000529540 CCDC93Q567U6 631 aa17.53■□□□□ 0.4
NR1H3-231ENST00000529540 DPP8Q6V1X1 898 aaPredicted RBP17.53■□□□□ 0.4
NR1H3-231ENST00000529540 C15orf52Q6ZUT6 534 aaKnown RBP17.53■□□□□ 0.4
NR1H3-231ENST00000529540 RTKN2Q8IZC4 609 aa17.53■□□□□ 0.4
NR1H3-231ENST00000529540 SUPT20HQ8NEM7 779 aa17.53■□□□□ 0.4
NR1H3-231ENST00000529540 XAGE2Q96GT9 111 aa17.53■□□□□ 0.4
NR1H3-231ENST00000529540 ARAP2Q8WZ64 1704 aa17.53■□□□□ 0.4
NR1H3-231ENST00000529540 C16orf71Q8IYS4 520 aaPredicted RBP17.52■□□□□ 0.4
NR1H3-231ENST00000529540 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.52■□□□□ 0.4
NR1H3-231ENST00000529540 TRIM44Q96DX7 344 aaPredicted RBP17.52■□□□□ 0.4
NR1H3-231ENST00000529540 ZNF512BQ96KM6 892 aaPredicted RBP17.52■□□□□ 0.4
NR1H3-231ENST00000529540 EYA3Q99504 573 aa17.52■□□□□ 0.4
NR1H3-231ENST00000529540 GNL3LQ9NVN8 582 aaKnown RBP17.52■□□□□ 0.4
NR1H3-231ENST00000529540 UFL1O94874 794 aa17.52■□□□□ 0.39
NR1H3-231ENST00000529540 UQCRFS1P1P0C7P4 283 aa17.52■□□□□ 0.39
NR1H3-231ENST00000529540 GPSM2P81274 684 aa17.52■□□□□ 0.39
NR1H3-231ENST00000529540 C7orf43Q8WVR3 580 aa17.52■□□□□ 0.39
NR1H3-231ENST00000529540 DBNDD2Q9BQY9 259 aa17.52■□□□□ 0.39
NR1H3-231ENST00000529540 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.52■□□□□ 0.39
NR1H3-231ENST00000529540 ZBTB22O15209 634 aa17.51■□□□□ 0.39
NR1H3-231ENST00000529540 ATP5JP18859 108 aa17.51■□□□□ 0.39
NR1H3-231ENST00000529540 TTC39AQ5SRH9 613 aa17.51■□□□□ 0.39
NR1H3-231ENST00000529540 VPS37DQ86XT2 251 aa17.51■□□□□ 0.39
NR1H3-231ENST00000529540 FHDC1Q9C0D6 1143 aaPredicted RBP17.51■□□□□ 0.39
NR1H3-231ENST00000529540 MED23Q9ULK4 1368 aa17.5■□□□□ 0.39
NR1H3-231ENST00000529540 SLX4Q8IY92 1834 aa17.5■□□□□ 0.39
NR1H3-231ENST00000529540 BRCA1P38398 1863 aaKnown RBP17.5■□□□□ 0.39
NR1H3-231ENST00000529540 CACNA1SQ13698 1873 aa17.5■□□□□ 0.39
NR1H3-231ENST00000529540 BAG4O95429 457 aaKnown RBP17.5■□□□□ 0.39
NR1H3-231ENST00000529540 GSPT1P15170 499 aaKnown RBP17.5■□□□□ 0.39
NR1H3-231ENST00000529540 TBC1D16Q8TBP0 767 aa17.5■□□□□ 0.39
NR1H3-231ENST00000529540 C6orf229H3BNL8 230 aa17.49■□□□□ 0.39
NR1H3-231ENST00000529540 RRP9O43818 475 aaKnown RBP17.49■□□□□ 0.39
NR1H3-231ENST00000529540 CYP2E1P05181 493 aaPredicted RBP17.49■□□□□ 0.39
NR1H3-231ENST00000529540 NUCB2P80303 420 aa17.49■□□□□ 0.39
NR1H3-231ENST00000529540 TTC22Q5TAA0 569 aa17.49■□□□□ 0.39
NR1H3-231ENST00000529540 ZNF804AQ7Z570 1209 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms