RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 EAPPQ56P03 285 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 C15orf52Q6ZUT6 534 aaKnown RBP6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 USP17L1Q7RTZ2 530 aa6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 SMC1BQ8NDV3 1235 aa6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 KLHDC4Q8TBB5 520 aa6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 RBM46Q8TBY0 533 aaKnown RBP6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 PUS3Q9BZE2 481 aaKnown RBP6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 C1orf115Q9H7X2 142 aa6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 COPRSQ9NQ92 184 aa6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 CLEC11AQ9Y240 323 aa6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 AKAP2Q9Y2D5 859 aa6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 RIPOR2Q9Y4F9 1068 aa6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 LTBP1Q14766 1721 aa6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 MYO3BQ8WXR4 1341 aa6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 SPEF2Q9C093 1822 aa6.69□□□□□ -1.34
HMGB1P40-201ENST00000525121 TAF1P21675 1872 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 COL4A5P29400 1685 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 DICER1Q9UPY3 1922 aaKnown RBP6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 WDR90Q96KV7 1748 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 YDJCA8MPS7 323 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 PSMD14O00487 310 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 HIBADHP31937 336 aaKnown RBP6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 RFX5P48382 616 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 C1QTNF8P60827 252 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 FSTL1Q12841 308 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 ATP2B3Q16720 1220 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 HSP90AB4PQ58FF6 505 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 GORABQ5T7V8 394 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 STRIP1Q5VSL9 837 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 RSBN1LQ6PCB5 846 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 USP50Q70EL3 339 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 LDHDQ86WU2 507 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 ERC1Q8IUD2 1116 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 OGFOD1Q8N543 542 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 AGBL3Q8NEM8 1001 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 LPIN2Q92539 896 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 DPF2Q92785 391 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 TAF1DQ9H5J8 278 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 ADARB2Q9NS39 739 aaKnown RBP6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 GNL3LQ9NVN8 582 aaKnown RBP6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 GPRC5DQ9NZD1 345 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 HDAC9Q9UKV0 1011 aa6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 PA2G4Q9UQ80 394 aaKnown RBP6.68□□□□□ -1.34
HMGB1P40-201ENST00000525121 PNMA6EA0A0J9YXQ4 647 aa6.67□□□□□ -1.34
HMGB1P40-201ENST00000525121 SURF6O75683 361 aaKnown RBP6.67□□□□□ -1.34
HMGB1P40-201ENST00000525121 VIL1P09327 827 aaKnown RBP6.67□□□□□ -1.34
HMGB1P40-201ENST00000525121 KLRK1P26718 216 aa6.67□□□□□ -1.34
HMGB1P40-201ENST00000525121 MMP14P50281 582 aa6.67□□□□□ -1.34
HMGB1P40-201ENST00000525121 SCNN1DP51172 638 aa6.67□□□□□ -1.34
HMGB1P40-201ENST00000525121 GTF2IP78347 998 aa6.67□□□□□ -1.34
HMGB1P40-201ENST00000525121 ATP8B2P98198 1209 aa6.67□□□□□ -1.34
HMGB1P40-201ENST00000525121 TTLL5Q6EMB2 1281 aa6.67□□□□□ -1.34
HMGB1P40-201ENST00000525121 CHADLQ6NUI6 762 aa6.67□□□□□ -1.34
HMGB1P40-201ENST00000525121 CEP85Q6P2H3 762 aa6.67□□□□□ -1.34
HMGB1P40-201ENST00000525121 RPAP2Q8IXW5 612 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P40-201ENST00000525121 MICALL2Q8IY33 904 aa6.67□□□□□ -1.34
HMGB1P40-201ENST00000525121 VGLL2Q8N8G2 317 aa6.67□□□□□ -1.34
HMGB1P40-201ENST00000525121 CD209Q9NNX6 404 aa6.67□□□□□ -1.34
HMGB1P40-201ENST00000525121 CNOT7Q9UIV1 285 aaKnown RBP6.67□□□□□ -1.34
HMGB1P40-201ENST00000525121 GOLGB1Q14789 3259 aaKnown RBP6.67□□□□□ -1.34
HMGB1P40-201ENST00000525121 CCDC88AQ3V6T2 1871 aa6.66□□□□□ -1.34
HMGB1P40-201ENST00000525121 WTIPA6NIX2 430 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P40-201ENST00000525121 SNAP23O00161 211 aa6.66□□□□□ -1.34
HMGB1P40-201ENST00000525121 USP17L8P0C7I0 530 aa6.66□□□□□ -1.34
HMGB1P40-201ENST00000525121 IL1R1P14778 569 aa6.66□□□□□ -1.34
HMGB1P40-201ENST00000525121 EPS15P42566 896 aa6.66□□□□□ -1.34
HMGB1P40-201ENST00000525121 GYG1P46976 350 aa6.66□□□□□ -1.34
HMGB1P40-201ENST00000525121 TFCP2Q12800 502 aa6.66□□□□□ -1.34
HMGB1P40-201ENST00000525121 POLA2Q14181 598 aa6.66□□□□□ -1.34
HMGB1P40-201ENST00000525121 ATG9AQ7Z3C6 839 aa6.66□□□□□ -1.34
HMGB1P40-201ENST00000525121 TXNRD3Q86VQ6 643 aa6.66□□□□□ -1.34
HMGB1P40-201ENST00000525121 SSH3Q8TE77 659 aa6.66□□□□□ -1.34
HMGB1P40-201ENST00000525121 TBC1D22AQ8WUA7 517 aa6.66□□□□□ -1.34
HMGB1P40-201ENST00000525121 ZBTB40Q9NUA8 1239 aa6.66□□□□□ -1.34
HMGB1P40-201ENST00000525121 ZBTB12Q9Y330 459 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P40-201ENST00000525121 ZNF609O15014 1411 aa6.66□□□□□ -1.34
HMGB1P40-201ENST00000525121 SCN4AP35499 1836 aa6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 A0A1B0GUL7 405 aa6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 POTECB2RU33 542 aa6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 SEMA3EO15041 775 aa6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 SASH1O94885 1247 aa6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 FGFR2P21802 821 aa6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 FKBP1AP62942 108 aaKnown RBP6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 CHAF1AQ13111 956 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 AAMPQ13685 434 aa6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 KIF4BQ2VIQ3 1234 aa6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 TBC1D10BQ4KMP7 808 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 MFSD14BQ5SR56 506 aa6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 DACT2Q5SW24 774 aa6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 C20orf194Q5TEA3 1177 aa6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 FBXO33Q7Z6M2 555 aa6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 KIAA0825Q8IV33 1275 aa6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 TDRD7Q8NHU6 1098 aaKnown RBP6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 ZC3H15Q8WU90 426 aaKnown RBP6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 FAM84BQ96KN1 310 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 NEUROD6Q96NK8 337 aa6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 KCNQ5Q9NR82 932 aa6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 ZBTB47Q9UFB7 747 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P40-201ENST00000525121 MAST3O60307 1309 aa6.65□□□□□ -1.35
HMGB1P40-201ENST00000525121 UTRNP46939 3433 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms