RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 TSGA10IPQ3SY00 556 aa20.19■□□□□ 0.82
SREK1-212ENST00000522912 PDRG1Q9NUG6 133 aa20.19■□□□□ 0.82
SREK1-212ENST00000522912 HMG20BQ9P0W2 317 aa20.19■□□□□ 0.82
SREK1-212ENST00000522912 U3KPZ7 1027 aaPredicted RBP20.19■□□□□ 0.82
SREK1-212ENST00000522912 MAST3O60307 1309 aa20.19■□□□□ 0.82
SREK1-212ENST00000522912 ARID4AP29374 1257 aaPredicted RBP20.19■□□□□ 0.82
SREK1-212ENST00000522912 PKP1Q13835 747 aa20.19■□□□□ 0.82
SREK1-212ENST00000522912 VPS53Q5VIR6 699 aa20.19■□□□□ 0.82
SREK1-212ENST00000522912 FAM196AQ6ZSG2 479 aa20.19■□□□□ 0.82
SREK1-212ENST00000522912 INTS4Q96HW7 963 aaKnown RBP20.19■□□□□ 0.82
SREK1-212ENST00000522912 LARP6Q9BRS8 491 aaKnown RBP20.19■□□□□ 0.82
SREK1-212ENST00000522912 A0A1B0GUL6 1792 aa20.18■□□□□ 0.82
SREK1-212ENST00000522912 M0R2C6 588 aa20.18■□□□□ 0.82
SREK1-212ENST00000522912 SLC5A1P13866 664 aa20.18■□□□□ 0.82
SREK1-212ENST00000522912 NUCB2P80303 420 aa20.18■□□□□ 0.82
SREK1-212ENST00000522912 KRT27Q7Z3Y8 459 aa20.18■□□□□ 0.82
SREK1-212ENST00000522912 OSBP2Q969R2 916 aa20.18■□□□□ 0.82
SREK1-212ENST00000522912 PHF14O94880 888 aa20.17■□□□□ 0.82
SREK1-212ENST00000522912 GTF2E1P29083 439 aaPredicted RBP20.17■□□□□ 0.82
SREK1-212ENST00000522912 CDC5LQ99459 802 aaKnown RBP20.17■□□□□ 0.82
SREK1-212ENST00000522912 NYXQ9GZU5 481 aa20.17■□□□□ 0.82
SREK1-212ENST00000522912 LIMCH1Q9UPQ0 1083 aa20.17■□□□□ 0.82
SREK1-212ENST00000522912 EP400Q96L91 3159 aa20.17■□□□□ 0.82
SREK1-212ENST00000522912 PSMA5P28066 241 aa20.17■□□□□ 0.82
SREK1-212ENST00000522912 CHRNDQ07001 517 aa20.17■□□□□ 0.82
SREK1-212ENST00000522912 TRAPPC3LQ5T215 181 aa20.17■□□□□ 0.82
SREK1-212ENST00000522912 UBR3Q6ZT12 1888 aa20.16■□□□□ 0.82
SREK1-212ENST00000522912 ZFYP08048 801 aaPredicted RBP20.16■□□□□ 0.82
SREK1-212ENST00000522912 UQCRFS1P1P0C7P4 283 aa20.16■□□□□ 0.82
SREK1-212ENST00000522912 LRRFIP1Q32MZ4 808 aaKnown RBP20.16■□□□□ 0.82
SREK1-212ENST00000522912 NBPF5PQ86XG9 351 aaPredicted RBP20.16■□□□□ 0.82
SREK1-212ENST00000522912 DSCC1Q9BVC3 393 aa20.16■□□□□ 0.82
SREK1-212ENST00000522912 RFC4P35249 363 aa20.15■□□□□ 0.82
SREK1-212ENST00000522912 ZDHHC9Q9Y397 364 aa20.15■□□□□ 0.82
SREK1-212ENST00000522912 CYP21A2P08686 494 aa20.15■□□□□ 0.82
SREK1-212ENST00000522912 HSPD1P10809 573 aaKnown RBP20.15■□□□□ 0.82
SREK1-212ENST00000522912 DEKP35659 375 aaKnown RBP20.15■□□□□ 0.82
SREK1-212ENST00000522912 ANKRD18AQ8IVF6 992 aa20.15■□□□□ 0.82
SREK1-212ENST00000522912 PIH1D3Q9NQM4 214 aaKnown RBP20.15■□□□□ 0.82
SREK1-212ENST00000522912 TRIM37O94972 964 aa20.14■□□□□ 0.81
SREK1-212ENST00000522912 LARGE1O95461 756 aa20.14■□□□□ 0.81
SREK1-212ENST00000522912 BLOC1S2Q6QNY1 142 aa20.14■□□□□ 0.81
SREK1-212ENST00000522912 CLEC17AQ6ZS10 378 aa20.14■□□□□ 0.81
SREK1-212ENST00000522912 CCDC24Q8N4L8 307 aa20.14■□□□□ 0.81
SREK1-212ENST00000522912 GBP4Q96PP9 640 aa20.14■□□□□ 0.81
SREK1-212ENST00000522912 LAMA4Q16363 1823 aa20.14■□□□□ 0.81
SREK1-212ENST00000522912 RPS6KB1P23443 525 aa20.14■□□□□ 0.81
SREK1-212ENST00000522912 WASHC4Q2M389 1173 aa20.14■□□□□ 0.81
SREK1-212ENST00000522912 TTF1Q15361 905 aaPredicted RBP20.13■□□□□ 0.81
SREK1-212ENST00000522912 TPTE2Q6XPS3 522 aa20.13■□□□□ 0.81
SREK1-212ENST00000522912 APPBP2Q92624 585 aa20.13■□□□□ 0.81
SREK1-212ENST00000522912 BSDC1Q9NW68 430 aaPredicted RBP20.13■□□□□ 0.81
SREK1-212ENST00000522912 DDX11L8A8MPP1 907 aa20.12■□□□□ 0.81
SREK1-212ENST00000522912 KRT32Q14532 448 aa20.12■□□□□ 0.81
SREK1-212ENST00000522912 CELF1Q92879 486 aaKnown RBP20.12■□□□□ 0.81
SREK1-212ENST00000522912 PUS7LQ9H0K6 701 aaKnown RBP20.12■□□□□ 0.81
SREK1-212ENST00000522912 TCEANC2Q96MN5 208 aa20.12■□□□□ 0.81
SREK1-212ENST00000522912 NLRP3Q96P20 1036 aa20.12■□□□□ 0.81
SREK1-212ENST00000522912 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.12■□□□□ 0.81
SREK1-212ENST00000522912 ALDH8A1Q9H2A2 487 aaPredicted RBP20.12■□□□□ 0.81
SREK1-212ENST00000522912 DOCK2Q92608 1830 aa20.11■□□□□ 0.81
SREK1-212ENST00000522912 A0A0G2JLW4 131 aa20.11■□□□□ 0.81
SREK1-212ENST00000522912 FOXP2O15409 715 aa20.11■□□□□ 0.81
SREK1-212ENST00000522912 ADD2P35612 726 aa20.11■□□□□ 0.81
SREK1-212ENST00000522912 BCAMP50895 628 aa20.11■□□□□ 0.81
SREK1-212ENST00000522912 RASGRF1Q13972 1273 aa20.11■□□□□ 0.81
SREK1-212ENST00000522912 STOX1Q6ZVD7 989 aa20.11■□□□□ 0.81
SREK1-212ENST00000522912 SPATA5Q8NB90 893 aa20.11■□□□□ 0.81
SREK1-212ENST00000522912 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.1■□□□□ 0.81
SREK1-212ENST00000522912 BAG4O95429 457 aaKnown RBP20.1■□□□□ 0.81
SREK1-212ENST00000522912 ADRA2BP18089 450 aa20.1■□□□□ 0.81
SREK1-212ENST00000522912 NFIXQ14938 502 aa20.1■□□□□ 0.81
SREK1-212ENST00000522912 SLC27A3Q5K4L6 730 aa20.1■□□□□ 0.81
SREK1-212ENST00000522912 ZSCAN31Q96LW9 406 aaPredicted RBP20.1■□□□□ 0.81
SREK1-212ENST00000522912 NEK1Q96PY6 1258 aa20.1■□□□□ 0.81
SREK1-212ENST00000522912 MINPP1Q9UNW1 487 aa20.1■□□□□ 0.81
SREK1-212ENST00000522912 TNRC6CQ9HCJ0 1690 aaKnown RBP20.1■□□□□ 0.81
SREK1-212ENST00000522912 WTIPA6NIX2 430 aaPredicted RBP20.1■□□□□ 0.81
SREK1-212ENST00000522912 ME3Q16798 604 aa20.1■□□□□ 0.81
SREK1-212ENST00000522912 SLC9C2Q5TAH2 1124 aa20.1■□□□□ 0.81
SREK1-212ENST00000522912 TPCN1Q9ULQ1 816 aa20.1■□□□□ 0.81
SREK1-212ENST00000522912 IDH1O75874 414 aaKnown RBP20.09■□□□□ 0.81
SREK1-212ENST00000522912 TOB2Q14106 344 aaPredicted RBP20.09■□□□□ 0.81
SREK1-212ENST00000522912 GSE1Q14687 1217 aa20.09■□□□□ 0.81
SREK1-212ENST00000522912 ZSCAN25Q6NSZ9 544 aa20.09■□□□□ 0.81
SREK1-212ENST00000522912 RBM6P78332 1123 aaKnown RBP20.09■□□□□ 0.81
SREK1-212ENST00000522912 ST3GAL1Q11201 340 aa20.09■□□□□ 0.81
SREK1-212ENST00000522912 SH2B1Q9NRF2 756 aaPredicted RBP20.09■□□□□ 0.81
SREK1-212ENST00000522912 WWC3Q9ULE0 1092 aa20.09■□□□□ 0.81
SREK1-212ENST00000522912 GPAA1O43292 621 aa20.08■□□□□ 0.8
SREK1-212ENST00000522912 TRAK2O60296 914 aa20.08■□□□□ 0.8
SREK1-212ENST00000522912 BRD1O95696 1058 aa20.08■□□□□ 0.8
SREK1-212ENST00000522912 PDE6AP16499 860 aa20.08■□□□□ 0.8
SREK1-212ENST00000522912 TM4SF1P30408 202 aa20.08■□□□□ 0.8
SREK1-212ENST00000522912 RPS8P62241 208 aaKnown RBP20.08■□□□□ 0.8
SREK1-212ENST00000522912 TTLL5Q6EMB2 1281 aa20.08■□□□□ 0.8
SREK1-212ENST00000522912 CCDC83Q8IWF9 413 aa20.08■□□□□ 0.8
SREK1-212ENST00000522912 CARMIL3Q8ND23 1372 aa20.08■□□□□ 0.8
SREK1-212ENST00000522912 TCRBV5S4A2TA0A5A2 114 aa20.07■□□□□ 0.8
SREK1-212ENST00000522912 UBE4AQ14139 1066 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms