RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 MICALL1Q8N3F8 863 aa7.55□□□□□ -1.2
SQLE-202ENST00000518604 GALNT6Q8NCL4 622 aa7.55□□□□□ -1.2
SQLE-202ENST00000518604 PLD4Q96BZ4 506 aa7.55□□□□□ -1.2
SQLE-202ENST00000518604 ZKSCAN3Q9BRR0 538 aa7.55□□□□□ -1.2
SQLE-202ENST00000518604 BCO2Q9BYV7 579 aa7.55□□□□□ -1.2
SQLE-202ENST00000518604 BHLHE41Q9C0J9 482 aaPredicted RBP7.55□□□□□ -1.2
SQLE-202ENST00000518604 C12orf49Q9H741 205 aa7.55□□□□□ -1.2
SQLE-202ENST00000518604 LATS2Q9NRM7 1088 aa7.55□□□□□ -1.2
SQLE-202ENST00000518604 PDE2AO00408 941 aaPredicted RBP7.54□□□□□ -1.2
SQLE-202ENST00000518604 GRM2Q14416 872 aa7.54□□□□□ -1.2
SQLE-202ENST00000518604 PERM1Q5SV97 790 aa7.54□□□□□ -1.2
SQLE-202ENST00000518604 PI16Q6UXB8 463 aa7.54□□□□□ -1.2
SQLE-202ENST00000518604 NXPE3Q969Y0 559 aa7.54□□□□□ -1.2
SQLE-202ENST00000518604 ZNF428Q96B54 188 aa7.54□□□□□ -1.2
SQLE-202ENST00000518604 LIN7BQ9HAP6 207 aa7.54□□□□□ -1.2
SQLE-202ENST00000518604 FAM8A1Q9UBU6 413 aa7.54□□□□□ -1.2
SQLE-202ENST00000518604 RGS9O75916 674 aaPredicted RBP7.53□□□□□ -1.2
SQLE-202ENST00000518604 CELA2BP08218 269 aaPredicted RBP7.53□□□□□ -1.2
SQLE-202ENST00000518604 PTPN12Q05209 780 aaKnown RBP7.53□□□□□ -1.2
SQLE-202ENST00000518604 PSAPL1Q6NUJ1 521 aa7.53□□□□□ -1.2
SQLE-202ENST00000518604 BTBD6Q96KE9 485 aa7.53□□□□□ -1.2
SQLE-202ENST00000518604 TCF12Q99081 682 aa7.53□□□□□ -1.2
SQLE-202ENST00000518604 LPIN3Q9BQK8 851 aa7.53□□□□□ -1.2
SQLE-202ENST00000518604 OSBPL7Q9BZF2 842 aa7.53□□□□□ -1.2
SQLE-202ENST00000518604 RASSF4Q9H2L5 321 aa7.53□□□□□ -1.2
SQLE-202ENST00000518604 KIAA1522Q9P206 1035 aaPredicted RBP7.53□□□□□ -1.2
SQLE-202ENST00000518604 NAGPAQ9UK23 515 aa7.53□□□□□ -1.2
SQLE-202ENST00000518604 GSTT1P30711 240 aa7.52□□□□□ -1.21
SQLE-202ENST00000518604 CEP135Q66GS9 1140 aa7.52□□□□□ -1.21
SQLE-202ENST00000518604 NXPE4Q6UWF7 544 aa7.52□□□□□ -1.21
SQLE-202ENST00000518604 LYPD4Q6UWN0 246 aa7.52□□□□□ -1.21
SQLE-202ENST00000518604 C20orf204Q6ZNR8 217 aa7.52□□□□□ -1.21
SQLE-202ENST00000518604 C1orf229Q6ZS94 237 aaPredicted RBP7.52□□□□□ -1.21
SQLE-202ENST00000518604 GLIS3Q8NEA6 775 aa7.52□□□□□ -1.21
SQLE-202ENST00000518604 SMG9Q9H0W8 520 aaKnown RBP7.52□□□□□ -1.21
SQLE-202ENST00000518604 PRDM6Q9NQX0 595 aa7.52□□□□□ -1.21
SQLE-202ENST00000518604 ENAMQ9NRM1 1142 aa7.52□□□□□ -1.21
SQLE-202ENST00000518604 RNF19AQ9NV58 838 aa7.52□□□□□ -1.21
SQLE-202ENST00000518604 VTI1BQ9UEU0 232 aa7.52□□□□□ -1.21
SQLE-202ENST00000518604 STARD13Q9Y3M8 1113 aa7.52□□□□□ -1.21
SQLE-202ENST00000518604 TMEM238LA0A1B0GVL6 79 aa7.51□□□□□ -1.21
SQLE-202ENST00000518604 ACPPP15309 386 aa7.51□□□□□ -1.21
SQLE-202ENST00000518604 ATP11AP98196 1134 aa7.51□□□□□ -1.21
SQLE-202ENST00000518604 MAP3K10Q02779 954 aa7.51□□□□□ -1.21
SQLE-202ENST00000518604 CHSY3Q70JA7 882 aa7.51□□□□□ -1.21
SQLE-202ENST00000518604 ANKRD24Q8TF21 1146 aa7.51□□□□□ -1.21
SQLE-202ENST00000518604 FAM161BQ96MY7 647 aa7.51□□□□□ -1.21
SQLE-202ENST00000518604 POP1Q99575 1024 aaKnown RBP7.51□□□□□ -1.21
SQLE-202ENST00000518604 ADAM19Q9H013 955 aa7.51□□□□□ -1.21
SQLE-202ENST00000518604 FAM177BA6PVY3 158 aa7.5□□□□□ -1.21
SQLE-202ENST00000518604 LILRB5O75023 590 aa7.5□□□□□ -1.21
SQLE-202ENST00000518604 PTPRAP18433 802 aa7.5□□□□□ -1.21
SQLE-202ENST00000518604 ITPKAP23677 461 aa7.5□□□□□ -1.21
SQLE-202ENST00000518604 BSNDQ8WZ55 320 aa7.5□□□□□ -1.21
SQLE-202ENST00000518604 CRELD1Q96HD1 420 aa7.5□□□□□ -1.21
SQLE-202ENST00000518604 ABCB6Q9NP58 842 aa7.5□□□□□ -1.21
SQLE-202ENST00000518604 PPM1HQ9ULR3 514 aa7.5□□□□□ -1.21
SQLE-202ENST00000518604 A0A096LPE4 126 aa7.49□□□□□ -1.21
SQLE-202ENST00000518604 A0A1W2PPZ6 126 aa7.49□□□□□ -1.21
SQLE-202ENST00000518604 LORP23490 312 aaPredicted RBP7.49□□□□□ -1.21
SQLE-202ENST00000518604 RPS26P11Q5JNZ5 115 aaPredicted RBP7.49□□□□□ -1.21
SQLE-202ENST00000518604 BACH2Q9BYV9 841 aa7.49□□□□□ -1.21
SQLE-202ENST00000518604 MUC3BQ9H195 1237 aa7.49□□□□□ -1.21
SQLE-202ENST00000518604 JPH1Q9HDC5 661 aaPredicted RBP7.49□□□□□ -1.21
SQLE-202ENST00000518604 SHISA8B8ZZ34 492 aa7.48□□□□□ -1.21
SQLE-202ENST00000518604 TRPA1O75762 1119 aa7.48□□□□□ -1.21
SQLE-202ENST00000518604 ALBP02768 609 aa7.48□□□□□ -1.21
SQLE-202ENST00000518604 USP17L7P0C7H9 530 aa7.48□□□□□ -1.21
SQLE-202ENST00000518604 AMPD1P23109 780 aa7.48□□□□□ -1.21
SQLE-202ENST00000518604 GRIA4P48058 902 aa7.48□□□□□ -1.21
SQLE-202ENST00000518604 ZNF385CQ66K41 422 aaPredicted RBP7.48□□□□□ -1.21
SQLE-202ENST00000518604 DTHD1Q6ZMT9 781 aa7.48□□□□□ -1.21
SQLE-202ENST00000518604 NUDT8Q8WV74 236 aa7.48□□□□□ -1.21
SQLE-202ENST00000518604 HHIPQ96QV1 700 aa7.48□□□□□ -1.21
SQLE-202ENST00000518604 USP31Q70CQ4 1352 aa7.47□□□□□ -1.21
SQLE-202ENST00000518604 M0R082 166 aa7.47□□□□□ -1.21
SQLE-202ENST00000518604 EIF4EBP3O60516 100 aaPredicted RBP7.47□□□□□ -1.21
SQLE-202ENST00000518604 CDC27P30260 824 aa7.47□□□□□ -1.21
SQLE-202ENST00000518604 ST13P50502 369 aaKnown RBP7.47□□□□□ -1.21
SQLE-202ENST00000518604 AFF1P51825 1210 aaKnown RBP7.47□□□□□ -1.21
SQLE-202ENST00000518604 FCGRTP55899 365 aa7.47□□□□□ -1.21
SQLE-202ENST00000518604 GRIK5Q16478 980 aa7.47□□□□□ -1.21
SQLE-202ENST00000518604 C3orf58Q8NDZ4 430 aa7.47□□□□□ -1.21
SQLE-202ENST00000518604 NEDD1Q8NHV4 660 aa7.47□□□□□ -1.21
SQLE-202ENST00000518604 ZNF417Q8TAU3 575 aa7.47□□□□□ -1.21
SQLE-202ENST00000518604 ASAP3Q8TDY4 903 aa7.47□□□□□ -1.21
SQLE-202ENST00000518604 ZNF587Q96SQ5 575 aaPredicted RBP7.47□□□□□ -1.21
SQLE-202ENST00000518604 SOX13Q9UN79 622 aa7.47□□□□□ -1.21
SQLE-202ENST00000518604 TRIM33Q9UPN9 1127 aa7.47□□□□□ -1.21
SQLE-202ENST00000518604 SCAMP3O14828 347 aaKnown RBP7.46□□□□□ -1.22
SQLE-202ENST00000518604 RECKO95980 971 aa7.46□□□□□ -1.22
SQLE-202ENST00000518604 CTSHP09668 335 aa7.46□□□□□ -1.22
SQLE-202ENST00000518604 CABP4P57796 275 aa7.46□□□□□ -1.22
SQLE-202ENST00000518604 TAF1CQ15572 869 aaPredicted RBP7.46□□□□□ -1.22
SQLE-202ENST00000518604 SPRED3Q2MJR0 410 aa7.46□□□□□ -1.22
SQLE-202ENST00000518604 TSNAXIP1Q2TAA8 658 aa7.46□□□□□ -1.22
SQLE-202ENST00000518604 SVOPQ8N4V2 548 aa7.46□□□□□ -1.22
SQLE-202ENST00000518604 TMEM87AQ8NBN3 555 aa7.46□□□□□ -1.22
SQLE-202ENST00000518604 WHAMMQ8TF30 809 aa7.46□□□□□ -1.22
SQLE-202ENST00000518604 METTL5Q9NRN9 209 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms