RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 INO80B-WBP1J3KQ70 363 aa0.7□□□□□ -2.3
SNORA40.16-201ENST00000517238 CPB1P15086 417 aa0.7□□□□□ -2.3
SNORA40.16-201ENST00000517238 BRPF1P55201 1214 aaPredicted RBP0.7□□□□□ -2.3
SNORA40.16-201ENST00000517238 SFSWAPQ12872 951 aaKnown RBP0.7□□□□□ -2.3
SNORA40.16-201ENST00000517238 MTMR2Q13614 643 aa0.7□□□□□ -2.3
SNORA40.16-201ENST00000517238 SSPNQ14714 243 aa0.7□□□□□ -2.3
SNORA40.16-201ENST00000517238 NKX1-1Q15270 411 aaPredicted RBP0.7□□□□□ -2.3
SNORA40.16-201ENST00000517238 ZFYVE27Q5T4F4 411 aa0.7□□□□□ -2.3
SNORA40.16-201ENST00000517238 PAOXQ6QHF9 649 aa0.7□□□□□ -2.3
SNORA40.16-201ENST00000517238 ZNF765Q7L2R6 523 aa0.7□□□□□ -2.3
SNORA40.16-201ENST00000517238 FAM35AQ86V20 835 aa0.7□□□□□ -2.3
SNORA40.16-201ENST00000517238 MAP4K3Q8IVH8 894 aa0.7□□□□□ -2.3
SNORA40.16-201ENST00000517238 LOXL4Q96JB6 756 aa0.7□□□□□ -2.3
SNORA40.16-201ENST00000517238 INO80BQ9C086 356 aaPredicted RBP0.7□□□□□ -2.3
SNORA40.16-201ENST00000517238 DNAJB12Q9NXW2 375 aaKnown RBP0.7□□□□□ -2.3
SNORA40.16-201ENST00000517238 A0A087X1B8 175 aa0.69□□□□□ -2.3
SNORA40.16-201ENST00000517238 FAM95CA0A1B0GW59 222 aa0.69□□□□□ -2.3
SNORA40.16-201ENST00000517238 PI3P19957 117 aa0.69□□□□□ -2.3
SNORA40.16-201ENST00000517238 FBLP22087 321 aaKnown RBP0.69□□□□□ -2.3
SNORA40.16-201ENST00000517238 CYP27A1Q02318 531 aa0.69□□□□□ -2.3
SNORA40.16-201ENST00000517238 PLAURQ03405 335 aa0.69□□□□□ -2.3
SNORA40.16-201ENST00000517238 PRKCQQ04759 706 aa0.69□□□□□ -2.3
SNORA40.16-201ENST00000517238 SETDB1Q15047 1291 aa0.69□□□□□ -2.3
SNORA40.16-201ENST00000517238 ANKRD34AQ69YU3 496 aa0.69□□□□□ -2.3
SNORA40.16-201ENST00000517238 ELMSAN1Q6PJG2 1045 aa0.69□□□□□ -2.3
SNORA40.16-201ENST00000517238 CYFIP1Q7L576 1253 aa0.69□□□□□ -2.3
SNORA40.16-201ENST00000517238 NUTM1Q86Y26 1132 aa0.69□□□□□ -2.3
SNORA40.16-201ENST00000517238 GPKOWQ92917 476 aaPredicted RBP eCLIP0.69□□□□□ -2.3
SNORA40.16-201ENST00000517238 DVL3Q92997 716 aaPredicted RBP0.69□□□□□ -2.3
SNORA40.16-201ENST00000517238 KISS1RQ969F8 398 aaPredicted RBP0.69□□□□□ -2.3
SNORA40.16-201ENST00000517238 LPIN3Q9BQK8 851 aa0.69□□□□□ -2.3
SNORA40.16-201ENST00000517238 VAV3Q9UKW4 847 aa0.69□□□□□ -2.3
SNORA40.16-201ENST00000517238 ADAM11O75078 769 aa0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 IL2RAP01589 272 aa0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 CBSLP0DN79 551 aa0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 CDK4P11802 303 aa0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 TATP17735 454 aaPredicted RBP0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 CBSP35520 551 aa0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 DPTQ07507 201 aa0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 FAM69CQ0P6D2 419 aa0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 CC2D2BQ6DHV5 1058 aa0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 FDX2Q6P4F2 183 aa0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 KIAA1211Q6ZU35 1233 aa0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 FERMT3Q86UX7 667 aa0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 PLD6Q8N2A8 252 aaKnown RBP0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 TTC9BQ8N6N2 239 aa0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 DNAJC5GQ8N7S2 189 aa0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 CHST13Q8NET6 341 aa0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 PANK1Q8TE04 598 aa0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 FRRS1LQ9P0K9 344 aa0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 ZBTB32Q9Y2Y4 487 aaPredicted RBP0.68□□□□□ -2.3
SNORA40.16-201ENST00000517238 SEMA7AO75326 666 aa0.67□□□□□ -2.3
SNORA40.16-201ENST00000517238 ITGB3P05106 788 aa0.67□□□□□ -2.3
SNORA40.16-201ENST00000517238 AOC3Q16853 763 aa0.67□□□□□ -2.3
SNORA40.16-201ENST00000517238 DUOXA2Q1HG44 320 aa0.67□□□□□ -2.3
SNORA40.16-201ENST00000517238 NBPF1Q3BBV0 1214 aa0.67□□□□□ -2.3
SNORA40.16-201ENST00000517238 PERM1Q5SV97 790 aa0.67□□□□□ -2.3
SNORA40.16-201ENST00000517238 TMEM132EQ6IEE7 984 aa0.67□□□□□ -2.3
SNORA40.16-201ENST00000517238 BICDL1Q6ZP65 573 aa0.67□□□□□ -2.3
SNORA40.16-201ENST00000517238 DACT3Q96B18 629 aaPredicted RBP0.67□□□□□ -2.3
SNORA40.16-201ENST00000517238 PHOX2BQ99453 314 aa0.67□□□□□ -2.3
SNORA40.16-201ENST00000517238 ZNF341Q9BYN7 854 aa0.67□□□□□ -2.3
SNORA40.16-201ENST00000517238 FHDC1Q9C0D6 1143 aaPredicted RBP0.67□□□□□ -2.3
SNORA40.16-201ENST00000517238 CD68P34810 354 aaPredicted RBP0.66□□□□□ -2.3
SNORA40.16-201ENST00000517238 ZNF76P36508 570 aa0.66□□□□□ -2.3
SNORA40.16-201ENST00000517238 GDF10P55107 478 aa0.66□□□□□ -2.3
SNORA40.16-201ENST00000517238 ERVK-9P63128 1117 aa0.66□□□□□ -2.3
SNORA40.16-201ENST00000517238 ZP2Q05996 745 aa0.66□□□□□ -2.3
SNORA40.16-201ENST00000517238 LCE1FQ5T754 118 aa0.66□□□□□ -2.3
SNORA40.16-201ENST00000517238 IL22RA1Q8N6P7 574 aa0.66□□□□□ -2.3
SNORA40.16-201ENST00000517238 C9orf106Q8NAJ2 232 aa0.66□□□□□ -2.3
SNORA40.16-201ENST00000517238 HRASLS5Q96KN8 279 aa0.66□□□□□ -2.3
SNORA40.16-201ENST00000517238 MCOLN1Q9GZU1 580 aa0.66□□□□□ -2.3
SNORA40.16-201ENST00000517238 ESF1Q9H501 851 aaKnown RBP0.66□□□□□ -2.3
SNORA40.16-201ENST00000517238 ADARB2Q9NS39 739 aaKnown RBP0.66□□□□□ -2.3
SNORA40.16-201ENST00000517238 TESQ9UGI8 421 aaKnown RBP0.66□□□□□ -2.3
SNORA40.16-201ENST00000517238 PRKAG2Q9UGJ0 569 aa0.66□□□□□ -2.3
SNORA40.16-201ENST00000517238 ZFR2Q9UPR6 939 aaKnown RBP0.66□□□□□ -2.3
SNORA40.16-201ENST00000517238 TSC22D4Q9Y3Q8 395 aa0.66□□□□□ -2.3
SNORA40.16-201ENST00000517238 PER1O15534 1290 aaPredicted RBP0.65□□□□□ -2.31
SNORA40.16-201ENST00000517238 CEBPAP49715 358 aaPredicted RBP0.65□□□□□ -2.31
SNORA40.16-201ENST00000517238 KLHL22Q53GT1 634 aa0.65□□□□□ -2.31
SNORA40.16-201ENST00000517238 PPARGC1BQ86YN6 1023 aaKnown RBP0.65□□□□□ -2.31
SNORA40.16-201ENST00000517238 SEPT12Q8IYM1 358 aa0.65□□□□□ -2.31
SNORA40.16-201ENST00000517238 SAMD11Q96NU1 681 aa0.65□□□□□ -2.31
SNORA40.16-201ENST00000517238 SMG9Q9H0W8 520 aaKnown RBP0.65□□□□□ -2.31
SNORA40.16-201ENST00000517238 USP40Q9NVE5 1235 aa0.65□□□□□ -2.31
SNORA40.16-201ENST00000517238 ARIH1Q9Y4X5 557 aaPredicted RBP0.65□□□□□ -2.31
SNORA40.16-201ENST00000517238 MUC19Q7Z5P9 8384 aa0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 CFAP99D6REC4 459 aa0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 NPIPB8E9PQR5 432 aa0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 KRTAP4-16G5E9R7 235 aaPredicted RBP0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 MASP2O00187 686 aa0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 GNRH1P01148 92 aa0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 KCNC1P48547 511 aa0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 ABHD18Q0P651 414 aa0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 PTK7Q13308 1070 aa0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 IKZF1Q13422 519 aa0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 HIC1Q14526 733 aa0.64□□□□□ -2.31
SNORA40.16-201ENST00000517238 PDXDC2PQ6P474 469 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms