RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 LTBP3Q9NS15 1303 aa6.68□□□□□ -1.34
SCARNA16.4-201ENST00000516956 COL11A2P13942 1736 aaPredicted RBP6.67□□□□□ -1.34
SCARNA16.4-201ENST00000516956 UQCRFS1P1P0C7P4 283 aa6.67□□□□□ -1.34
SCARNA16.4-201ENST00000516956 TIMM10P62072 90 aa6.67□□□□□ -1.34
SCARNA16.4-201ENST00000516956 KIAA2012Q0VF49 1180 aa6.67□□□□□ -1.34
SCARNA16.4-201ENST00000516956 TNNI3KQ59H18 835 aa6.67□□□□□ -1.34
SCARNA16.4-201ENST00000516956 C9orf131Q5VYM1 1079 aa6.67□□□□□ -1.34
SCARNA16.4-201ENST00000516956 CENPQQ7L2Z9 268 aaPredicted RBP6.67□□□□□ -1.34
SCARNA16.4-201ENST00000516956 SIRT2Q8IXJ6 389 aa6.67□□□□□ -1.34
SCARNA16.4-201ENST00000516956 RTFDC1Q9BY42 306 aaPredicted RBP6.67□□□□□ -1.34
SCARNA16.4-201ENST00000516956 CCDC8Q9H0W5 538 aaPredicted RBP6.67□□□□□ -1.34
SCARNA16.4-201ENST00000516956 POLLQ9UGP5 575 aa6.67□□□□□ -1.34
SCARNA16.4-201ENST00000516956 ZNRF3Q9ULT6 936 aa6.67□□□□□ -1.34
SCARNA16.4-201ENST00000516956 GJA3Q9Y6H8 435 aa6.67□□□□□ -1.34
SCARNA16.4-201ENST00000516956 FPGT-TNNI3KV9GXZ4 949 aa6.67□□□□□ -1.34
SCARNA16.4-201ENST00000516956 MED23Q9ULK4 1368 aa6.67□□□□□ -1.34
SCARNA16.4-201ENST00000516956 DLEC1Q9Y238 1755 aa6.67□□□□□ -1.34
SCARNA16.4-201ENST00000516956 CACNA1SQ13698 1873 aa6.66□□□□□ -1.34
SCARNA16.4-201ENST00000516956 NFKBIEO00221 500 aa6.66□□□□□ -1.34
SCARNA16.4-201ENST00000516956 ERC2O15083 957 aa6.66□□□□□ -1.34
SCARNA16.4-201ENST00000516956 ECE2O60344 883 aa6.66□□□□□ -1.34
SCARNA16.4-201ENST00000516956 SASH1O94885 1247 aa6.66□□□□□ -1.34
SCARNA16.4-201ENST00000516956 LMOD1P29536 600 aaPredicted RBP6.66□□□□□ -1.34
SCARNA16.4-201ENST00000516956 GYG1P46976 350 aa6.66□□□□□ -1.34
SCARNA16.4-201ENST00000516956 CHAF1AQ13111 956 aaPredicted RBP6.66□□□□□ -1.34
SCARNA16.4-201ENST00000516956 PODNQ7Z5L7 613 aa6.66□□□□□ -1.34
SCARNA16.4-201ENST00000516956 ZGPATQ8N5A5 531 aaKnown RBP6.66□□□□□ -1.34
SCARNA16.4-201ENST00000516956 XAGE2Q96GT9 111 aa6.66□□□□□ -1.34
SCARNA16.4-201ENST00000516956 GPR101Q96P66 508 aaPredicted RBP6.66□□□□□ -1.34
SCARNA16.4-201ENST00000516956 DBNDD1Q9H9R9 158 aa6.66□□□□□ -1.34
SCARNA16.4-201ENST00000516956 DENND2AQ9ULE3 1009 aa6.66□□□□□ -1.34
SCARNA16.4-201ENST00000516956 SLX4Q8IY92 1834 aa6.66□□□□□ -1.34
SCARNA16.4-201ENST00000516956 USP17L3A6NCW0 530 aa6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 USP17L4A6NCW7 530 aa6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 SNAP23O00161 211 aa6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 SEMA3EO15041 775 aa6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 SMARCA5O60264 1052 aaPredicted RBP6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 RAD17O75943 681 aa6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 IGHDP01880 384 aa6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 BCAMP50895 628 aa6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 LRRFIP1Q32MZ4 808 aaKnown RBP6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 SPTY2D1Q68D10 685 aaPredicted RBP6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 TTLL5Q6EMB2 1281 aa6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 CIAPIN1Q6FI81 312 aa6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 C15orf52Q6ZUT6 534 aaKnown RBP6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 USP17L1Q7RTZ2 530 aa6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 CHD1LQ86WJ1 897 aa6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 OGFOD1Q8N543 542 aa6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 WDR66Q8TBY9 1149 aa6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 TBC1D22AQ8WUA7 517 aa6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 NOL10Q9BSC4 688 aaKnown RBP6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 LNPKQ9C0E8 428 aa6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 CD209Q9NNX6 404 aa6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 HDAC9Q9UKV0 1011 aa6.65□□□□□ -1.34
SCARNA16.4-201ENST00000516956 KDM2BQ8NHM5 1336 aa6.65□□□□□ -1.35
SCARNA16.4-201ENST00000516956 SPEF2Q9C093 1822 aa6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 FGFR2P21802 821 aa6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 ADORA1P30542 326 aa6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 GTF2IP78347 998 aa6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 TTF1Q15361 905 aaPredicted RBP6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 CCDC102BQ68D86 513 aa6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 FBXO33Q7Z6M2 555 aa6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 SLF2Q8IX21 1173 aa6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 SMC5Q8IY18 1101 aa6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 VGLL2Q8N8G2 317 aa6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 EAF2Q96CJ1 260 aaPredicted RBP6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 FAM84BQ96KN1 310 aaPredicted RBP6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 DBNDD2Q9BQY9 259 aa6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 ECHDC1Q9NTX5 307 aa6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 LRP2BPQ9P2M1 347 aa6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 IQSEC3Q9UPP2 1182 aaPredicted RBP6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 MYO3BQ8WXR4 1341 aa6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 ZC3H4Q9UPT8 1303 aaKnown RBP6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 KIAA1551Q9HCM1 1747 aa6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 ARFGEF1Q9Y6D6 1849 aa6.64□□□□□ -1.35
SCARNA16.4-201ENST00000516956 IQCA1LA6NCM1 817 aa6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 TRIM6-TRIM34B2RNG4 842 aa6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 H7C1D1 291 aa6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 ZNF609O15014 1411 aa6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 MAST3O60307 1309 aa6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 GLRX3O76003 335 aaKnown RBP6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 LDHBP07195 334 aaKnown RBP6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 IL1R1P14778 569 aa6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 MX1P20591 662 aa6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 TAF1P21675 1872 aa6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 RPS12P25398 132 aaKnown RBP6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 PHKA1P46020 1223 aa6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 RBM5P52756 815 aaKnown RBP eCLIP6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 GSTO1P78417 241 aa6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 NUCB1Q02818 461 aa6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 STRIP1Q5VSL9 837 aa6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 TTC41PQ6P2S7 1318 aa6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 TXNRD3Q86VQ6 643 aa6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 DZIP1Q86YF9 867 aaKnown RBP6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 C16orf71Q8IYS4 520 aaPredicted RBP6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 GPC2Q8N158 579 aa6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 SPATA5Q8NB90 893 aa6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 TDRD7Q8NHU6 1098 aaKnown RBP6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 DNAJC2Q99543 621 aaKnown RBP6.63□□□□□ -1.35
SCARNA16.4-201ENST00000516956 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms