RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 ATF3P18847 181 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 GNAT2P19087 354 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 CMA1P23946 247 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 HMGB2P26583 209 aaKnown RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 GTF2E1P29083 439 aaPredicted RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 HOXA7P31268 230 aaPredicted RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 TXLNAP40222 546 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 IARSP41252 1262 aaKnown RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 KCNJ6P48051 423 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 UBASH3AP57075 661 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 EVA1CP58658 441 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 NLRP12P59046 1061 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 PIP4K2BP78356 416 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 CEBPZQ03701 1054 aaKnown RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 DMTNQ08495 405 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 SSRP1Q08945 709 aaKnown RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 SEMA3FQ13275 785 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 NMIQ13287 307 aaPredicted RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 STIM1Q13586 685 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 ME3Q16798 604 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 CFAP100Q494V2 611 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 MAP9Q49MG5 647 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 HSP90AB3PQ58FF7 597 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCDC178Q5BJE1 867 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 TTC39AQ5SRH9 613 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 ERCC6L2Q5T890 1561 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 IQCEQ6IPM2 695 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 CTR9Q6PD62 1173 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 SARM1Q6SZW1 724 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 MPRIPQ6WCQ1 1025 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 LEKR1Q6ZMV7 388 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 MON2Q7Z3U7 1717 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 FERMT3Q86UX7 667 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 CKAP2LQ8IYA6 745 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 ELOA2Q8IYF1 753 aaPredicted RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 PDILTQ8N807 584 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 CEP112Q8N8E3 955 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 FSIP1Q8NA03 581 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCDC148Q8NFR7 591 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 IL17REQ8NFR9 667 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 PI4K2BQ8TCG2 481 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 OTUD7AQ8TE49 926 aaPredicted RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 LEO1Q8WVC0 666 aaPredicted RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 SLC26A8Q96RN1 970 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 DNAJC2Q99543 621 aaKnown RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 MPHOSPH8Q99549 860 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 MYD88Q99836 296 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 BPIFA3Q9BQP9 254 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 METTL22Q9BUU2 404 aaPredicted RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 NAA15Q9BXJ9 866 aaKnown RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 KRT23Q9C075 422 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 RNF41Q9H4P4 317 aaPredicted RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 CNNM2Q9H8M5 875 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 CBX8Q9HC52 389 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 GOPCQ9HD26 462 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 COPRSQ9NQ92 184 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 GNL3LQ9NVN8 582 aaKnown RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZNHIT6Q9NWK9 470 aaKnown RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 FMN2Q9NZ56 1722 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 RTEL1Q9NZ71 1219 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 KIAA1468Q9P260 1216 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 CHPF2Q9P2E5 772 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZRANB1Q9UGI0 708 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 TPCN1Q9ULQ1 816 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 MTMR6Q9Y217 621 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 MORC2Q9Y6X9 1032 aaPredicted RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 MROH1Q8NDA8 1641 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 COL3A1P02461 1466 aaPredicted RBP2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 IGSF1Q8N6C5 1336 aa2.38□□□□□ -2.03
RNU1-40P-201ENST00000516816 AGLP35573 1532 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 KDRP35968 1356 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 TMEM2Q9UHN6 1383 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 RICTORQ6R327 1708 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 KNDC1Q76NI1 1749 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 SPATA31D1Q6ZQQ2 1576 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 DIP2CQ9Y2E4 1556 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 USP6P35125 1406 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 CRB1P82279 1406 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 ATP10DQ9P241 1426 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 TESPA1A2RU30 521 aaPredicted RBP2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 EFCAB8A8MWE9 144 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 ARHGAP6O43182 974 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 FOXO3O43524 673 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 RAD21O60216 631 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 KIF5CO60282 957 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 STX10O60499 249 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 PPP6R2O75170 966 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 TAF5LO75529 589 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 URI1O94763 535 aaPredicted RBP2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZNF202O95125 648 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 YEATS4O95619 227 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 FGFR1OPO95684 399 aaKnown RBP2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 STARD3NLO95772 234 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 GCP02774 474 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 IVLP07476 585 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 CALM1P0DP23 149 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 CALM2P0DP24 149 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 CALM3P0DP25 149 aa2.37□□□□□ -2.03
RNU1-40P-201ENST00000516816 MYL6BP14649 208 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms