RNA–Protein interactions for RNA: ENST00000511072.5

PRDM16-206, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-206ENST00000511072 RSPH14Q9UHP6 348 aa16.34■□□□□ 0.21
PRDM16-206ENST00000511072 SBNO1A3KN83 1393 aa16.34■□□□□ 0.21
PRDM16-206ENST00000511072 NAA30Q147X3 362 aaPredicted RBP16.33■□□□□ 0.21
PRDM16-206ENST00000511072 IFIT1BQ5T764 474 aaKnown RBP16.33■□□□□ 0.21
PRDM16-206ENST00000511072 OTUD7BQ6GQQ9 843 aa16.33■□□□□ 0.21
PRDM16-206ENST00000511072 CCDC24Q8N4L8 307 aa16.33■□□□□ 0.21
PRDM16-206ENST00000511072 AOPEPQ8N6M6 819 aa16.33■□□□□ 0.21
PRDM16-206ENST00000511072 CNKSR2Q8WXI2 1034 aa16.33■□□□□ 0.21
PRDM16-206ENST00000511072 TCP11L1Q9NUJ3 509 aa16.33■□□□□ 0.21
PRDM16-206ENST00000511072 MBD5Q9P267 1494 aa16.33■□□□□ 0.21
PRDM16-206ENST00000511072 KIF5BP33176 963 aa16.33■□□□□ 0.21
PRDM16-206ENST00000511072 TDRD12Q587J7 1177 aaKnown RBP16.33■□□□□ 0.21
PRDM16-206ENST00000511072 SGSM2O43147 1006 aa16.33■□□□□ 0.2
PRDM16-206ENST00000511072 ZSCAN12O43309 604 aa16.33■□□□□ 0.2
PRDM16-206ENST00000511072 LDHCP07864 332 aa16.33■□□□□ 0.2
PRDM16-206ENST00000511072 GTF3C6Q969F1 213 aa16.33■□□□□ 0.2
PRDM16-206ENST00000511072 IBTKQ9P2D0 1353 aaPredicted RBP16.33■□□□□ 0.2
PRDM16-206ENST00000511072 ATP7AQ04656 1500 aa16.33■□□□□ 0.2
PRDM16-206ENST00000511072 GSPT1P15170 499 aaKnown RBP16.33■□□□□ 0.2
PRDM16-206ENST00000511072 TYRO3Q06418 890 aa16.33■□□□□ 0.2
PRDM16-206ENST00000511072 CRNKL1Q9BZJ0 848 aaKnown RBP16.33■□□□□ 0.2
PRDM16-206ENST00000511072 KDM6BO15054 1643 aa16.32■□□□□ 0.2
PRDM16-206ENST00000511072 ERLIN1O75477 346 aa16.32■□□□□ 0.2
PRDM16-206ENST00000511072 MTIF2P46199 727 aaKnown RBP16.32■□□□□ 0.2
PRDM16-206ENST00000511072 BCORL1Q5H9F3 1711 aa16.32■□□□□ 0.2
PRDM16-206ENST00000511072 UBAP1LF5GYI3 381 aa16.32■□□□□ 0.2
PRDM16-206ENST00000511072 SPTY2D1Q68D10 685 aaPredicted RBP16.32■□□□□ 0.2
PRDM16-206ENST00000511072 LUZP1Q86V48 1076 aa16.32■□□□□ 0.2
PRDM16-206ENST00000511072 INTS4Q96HW7 963 aaKnown RBP16.32■□□□□ 0.2
PRDM16-206ENST00000511072 EYA2O00167 538 aa16.32■□□□□ 0.2
PRDM16-206ENST00000511072 N4BP3O15049 544 aa16.32■□□□□ 0.2
PRDM16-206ENST00000511072 SPTLC2O15270 562 aa16.32■□□□□ 0.2
PRDM16-206ENST00000511072 KIF5CO60282 957 aa16.32■□□□□ 0.2
PRDM16-206ENST00000511072 EIF4A1P60842 406 aaKnown RBP16.32■□□□□ 0.2
PRDM16-206ENST00000511072 TMCO3Q6UWJ1 677 aa16.32■□□□□ 0.2
PRDM16-206ENST00000511072 METTL22Q9BUU2 404 aaPredicted RBP16.32■□□□□ 0.2
PRDM16-206ENST00000511072 SNX14Q9Y5W7 946 aa16.32■□□□□ 0.2
PRDM16-206ENST00000511072 SKILP12757 684 aa16.31■□□□□ 0.2
PRDM16-206ENST00000511072 IBSPP21815 317 aaPredicted RBP16.31■□□□□ 0.2
PRDM16-206ENST00000511072 UBASH3AP57075 661 aa16.31■□□□□ 0.2
PRDM16-206ENST00000511072 TNNI3KQ59H18 835 aa16.31■□□□□ 0.2
PRDM16-206ENST00000511072 TCERG1LQ5VWI1 586 aa16.31■□□□□ 0.2
PRDM16-206ENST00000511072 KCNG4Q8TDN1 519 aa16.31■□□□□ 0.2
PRDM16-206ENST00000511072 UTP14AQ9BVJ6 771 aaKnown RBP16.31■□□□□ 0.2
PRDM16-206ENST00000511072 FPGT-TNNI3KV9GXZ4 949 aa16.31■□□□□ 0.2
PRDM16-206ENST00000511072 CHMP4BP1P59074 171 aa16.31■□□□□ 0.2
PRDM16-206ENST00000511072 SPA17Q15506 151 aa16.31■□□□□ 0.2
PRDM16-206ENST00000511072 DNAJC10Q8IXB1 793 aa16.31■□□□□ 0.2
PRDM16-206ENST00000511072 RNF216Q9NWF9 866 aaPredicted RBP16.31■□□□□ 0.2
PRDM16-206ENST00000511072 PLEKHG3A1L390 1219 aa16.31■□□□□ 0.2
PRDM16-206ENST00000511072 PYCARDQ9ULZ3 195 aa16.31■□□□□ 0.2
PRDM16-206ENST00000511072 A0A1B0GVL5 298 aa16.31■□□□□ 0.2
PRDM16-206ENST00000511072 FKBP15Q5T1M5 1219 aa16.31■□□□□ 0.2
PRDM16-206ENST00000511072 RAB34Q9BZG1 259 aa16.31■□□□□ 0.2
PRDM16-206ENST00000511072 PTGS1P23219 599 aa16.3■□□□□ 0.2
PRDM16-206ENST00000511072 PICALMQ13492 652 aa16.3■□□□□ 0.2
PRDM16-206ENST00000511072 ZNF397Q8NF99 534 aaPredicted RBP16.3■□□□□ 0.2
PRDM16-206ENST00000511072 NLRP1Q9C000 1473 aa16.3■□□□□ 0.2
PRDM16-206ENST00000511072 PRDM1O75626 825 aa16.3■□□□□ 0.2
PRDM16-206ENST00000511072 GNG11P61952 73 aa16.3■□□□□ 0.2
PRDM16-206ENST00000511072 GCKRQ14397 625 aa16.3■□□□□ 0.2
PRDM16-206ENST00000511072 LEKR1Q6ZMV7 388 aa16.3■□□□□ 0.2
PRDM16-206ENST00000511072 KRT23Q9C075 422 aa16.3■□□□□ 0.2
PRDM16-206ENST00000511072 ZNF521Q96K83 1311 aa16.3■□□□□ 0.2
PRDM16-206ENST00000511072 B4E1Z4 1266 aa16.3■□□□□ 0.2
PRDM16-206ENST00000511072 MCM9Q9NXL9 1143 aa16.3■□□□□ 0.2
PRDM16-206ENST00000511072 TSPY3P0CV98 308 aa16.29■□□□□ 0.2
PRDM16-206ENST00000511072 TSPY8P0CW00 308 aa16.29■□□□□ 0.2
PRDM16-206ENST00000511072 STX17P56962 302 aa16.29■□□□□ 0.2
PRDM16-206ENST00000511072 TMEM266Q2M3C6 531 aa16.29■□□□□ 0.2
PRDM16-206ENST00000511072 UVSSAQ2YD98 709 aa16.29■□□□□ 0.2
PRDM16-206ENST00000511072 KIF2AO00139 706 aaPredicted RBP16.29■□□□□ 0.2
PRDM16-206ENST00000511072 WDR78Q5VTH9 848 aa16.29■□□□□ 0.2
PRDM16-206ENST00000511072 HEATR3Q7Z4Q2 680 aa16.29■□□□□ 0.2
PRDM16-206ENST00000511072 DHX58Q96C10 678 aa16.29■□□□□ 0.2
PRDM16-206ENST00000511072 YEATS2Q9ULM3 1422 aa16.29■□□□□ 0.2
PRDM16-206ENST00000511072 TRPM2O94759 1503 aa16.29■□□□□ 0.2
PRDM16-206ENST00000511072 SLC27A2O14975 620 aa16.29■□□□□ 0.2
PRDM16-206ENST00000511072 TAF5LO75529 589 aa16.29■□□□□ 0.2
PRDM16-206ENST00000511072 MBD4O95243 580 aa16.29■□□□□ 0.2
PRDM16-206ENST00000511072 ITGA6P23229 1130 aa16.29■□□□□ 0.2
PRDM16-206ENST00000511072 TERF2Q15554 542 aa16.29■□□□□ 0.2
PRDM16-206ENST00000511072 PALD1Q9ULE6 856 aa16.29■□□□□ 0.2
PRDM16-206ENST00000511072 SSR1P43307 286 aaKnown RBP16.28■□□□□ 0.2
PRDM16-206ENST00000511072 SNW1Q13573 536 aaKnown RBP16.28■□□□□ 0.2
PRDM16-206ENST00000511072 GSDMDP57764 484 aa16.28■□□□□ 0.2
PRDM16-206ENST00000511072 PLBD2Q8NHP8 589 aa16.28■□□□□ 0.2
PRDM16-206ENST00000511072 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.28■□□□□ 0.22e-8■■■■■ 798.5
PRDM16-206ENST00000511072 MAST1Q9Y2H9 1570 aa16.28■□□□□ 0.2
PRDM16-206ENST00000511072 MATR3P43243 847 aaKnown RBP eCLIP16.28■□□□□ 0.22e-9■■■■■ 33.8
PRDM16-206ENST00000511072 TAX1BP1Q86VP1 789 aa16.28■□□□□ 0.2
PRDM16-206ENST00000511072 SLC52A2Q9HAB3 445 aa16.28■□□□□ 0.2
PRDM16-206ENST00000511072 TRIM47Q96LD4 638 aa16.27■□□□□ 0.2
PRDM16-206ENST00000511072 RASSF4Q9H2L5 321 aa16.27■□□□□ 0.2
PRDM16-206ENST00000511072 SAMD9Q5K651 1589 aa16.27■□□□□ 0.2
PRDM16-206ENST00000511072 TAF4BQ92750 862 aa16.27■□□□□ 0.2
PRDM16-206ENST00000511072 EAF2Q96CJ1 260 aaPredicted RBP16.27■□□□□ 0.2
PRDM16-206ENST00000511072 PLEKHF1Q96S99 279 aa16.27■□□□□ 0.2
PRDM16-206ENST00000511072 CNNM2Q9H8M5 875 aa16.27■□□□□ 0.2
PRDM16-206ENST00000511072 GADD45BO75293 160 aaPredicted RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms