RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 CCDC82Q8N4S0 544 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 USP33Q8TEY7 942 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 WHAMMQ8TF30 809 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 CORO1BQ9BR76 489 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 SLC7A5P2Q9GIP4 190 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 ATP6V0A4Q9HBG4 840 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 ZCCHC17Q9NP64 241 aaKnown RBP7.08□□□□□ -1.28
PDE4D-216ENST00000507116 IFT57Q9NWB7 429 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 TMEM63CQ9P1W3 806 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 SEL1LQ9UBV2 794 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 LAMC3Q9Y6N6 1575 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 GOLGA6L9A6NEM1 432 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 CCDC159P0C7I6 412 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 ZFXP17010 805 aaPredicted RBP7.07□□□□□ -1.28
PDE4D-216ENST00000507116 PDE4BQ07343 736 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 PARP10Q53GL7 1025 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 DUSP27Q5VZP5 1158 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 GBP7Q8N8V2 638 aaPredicted RBP7.07□□□□□ -1.28
PDE4D-216ENST00000507116 ITGB1BP2Q9UKP3 347 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 ABCA5Q8WWZ7 1642 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 FRMD3A2A2Y4 597 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.07□□□□□ -1.28
PDE4D-216ENST00000507116 ANKRD65E5RJM6 399 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 RPSAP08865 295 aaKnown RBP7.07□□□□□ -1.28
PDE4D-216ENST00000507116 FERP16591 822 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 CUL4BQ13620 913 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 NEUROD2Q15784 382 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 CAPRIN2Q6IMN6 1127 aaKnown RBP7.07□□□□□ -1.28
PDE4D-216ENST00000507116 SLF2Q8IX21 1173 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 GABPB2Q8TAK5 448 aaPredicted RBP7.07□□□□□ -1.28
PDE4D-216ENST00000507116 ZFAND2BQ8WV99 257 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 GIMAP1Q8WWP7 306 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 CAPS2Q9BXY5 557 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 LRRCC1Q9C099 1032 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 TUBA8Q9NY65 449 aaPredicted RBP7.07□□□□□ -1.28
PDE4D-216ENST00000507116 PCDHGC5Q9Y5F6 944 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 CCDC171Q6TFL3 1326 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 LRPPRCP42704 1394 aaKnown RBP7.07□□□□□ -1.28
PDE4D-216ENST00000507116 CCDC7Q96M83 1385 aa7.07□□□□□ -1.28
PDE4D-216ENST00000507116 RNF8O76064 485 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 SLC4A2P04920 1241 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 TGFB3P10600 412 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 ENOX2Q16206 610 aaKnown RBP7.06□□□□□ -1.28
PDE4D-216ENST00000507116 TPD52L1Q16890 204 aaPredicted RBP7.06□□□□□ -1.28
PDE4D-216ENST00000507116 RPAP2Q8IXW5 612 aaPredicted RBP7.06□□□□□ -1.28
PDE4D-216ENST00000507116 GORASP1Q9BQQ3 440 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 ZNF510Q9Y2H8 683 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 CASTP20810 708 aaKnown RBP7.06□□□□□ -1.28
PDE4D-216ENST00000507116 GBP2P32456 591 aaPredicted RBP7.06□□□□□ -1.28
PDE4D-216ENST00000507116 PSMD7P51665 324 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 SH3BGRP55822 239 aaPredicted RBP7.06□□□□□ -1.28
PDE4D-216ENST00000507116 CUL3Q13618 768 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 TSR1Q2NL82 804 aaKnown RBP7.06□□□□□ -1.28
PDE4D-216ENST00000507116 MTHFD1LQ6UB35 978 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 C11orf96Q7Z7L8 435 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 SPATS2Q86XZ4 545 aaKnown RBP7.06□□□□□ -1.28
PDE4D-216ENST00000507116 SPIRE2Q8WWL2 714 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 CTNNBL1Q8WYA6 563 aaPredicted RBP7.06□□□□□ -1.28
PDE4D-216ENST00000507116 CD248Q9HCU0 757 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 ZNHIT6Q9NWK9 470 aaKnown RBP7.06□□□□□ -1.28
PDE4D-216ENST00000507116 TFIP11Q9UBB9 837 aaKnown RBP7.06□□□□□ -1.28
PDE4D-216ENST00000507116 ATP6V0A2Q9Y487 856 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 ZEB2O60315 1214 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 PPFIA3O75145 1194 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 MTRF1O75570 445 aaKnown RBP7.06□□□□□ -1.28
PDE4D-216ENST00000507116 MBD4O95243 580 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 INPP5BP32019 993 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 NEK2P51955 445 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 TLDC1Q6P9B6 456 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 LRRC49Q8IUZ0 686 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 CEP112Q8N8E3 955 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 FBXW7Q969H0 707 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 OSBPL10Q9BXB5 764 aa7.06□□□□□ -1.28
PDE4D-216ENST00000507116 RPAP3Q9H6T3 665 aaPredicted RBP7.06□□□□□ -1.28
PDE4D-216ENST00000507116 LUC7LQ9NQ29 371 aaKnown RBP7.06□□□□□ -1.28
PDE4D-216ENST00000507116 NCOA1Q15788 1441 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 ERICH2A1L162 156 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 IL4RP24394 825 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 MAP3K9P80192 1104 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 MYBPC3Q14896 1274 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 CCDC57Q2TAC2 916 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 GNPTABQ3T906 1256 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 CCDC50Q8IVM0 306 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 STK11IPQ8N1F8 1099 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 ANKK1Q8NFD2 765 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 ENOX1Q8TC92 643 aaKnown RBP7.05□□□□□ -1.28
PDE4D-216ENST00000507116 DHTKD1Q96HY7 919 aaPredicted RBP7.05□□□□□ -1.28
PDE4D-216ENST00000507116 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.05□□□□□ -1.28
PDE4D-216ENST00000507116 RTEL1Q9NZ71 1219 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 C6orf203Q9P0P8 240 aaPredicted RBP7.05□□□□□ -1.28
PDE4D-216ENST00000507116 IKBKGQ9Y6K9 419 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 TMEM221A6NGB7 291 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 BBOX1O75936 387 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 ENPP1P22413 925 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 USP11P51784 963 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 TMEM62Q0P6H9 643 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 TTLL7Q6ZT98 887 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 LCA5Q86VQ0 697 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 LMNTD2Q8IXW0 634 aa7.05□□□□□ -1.28
PDE4D-216ENST00000507116 PDILTQ8N807 584 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms