RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 CRISPLD2Q9H0B8 497 aa4.71□□□□□ -1.66
TCOF1-208ENST00000506063 EPHX3Q9H6B9 360 aa4.71□□□□□ -1.66
TCOF1-208ENST00000506063 DBNDD1Q9H9R9 158 aa4.71□□□□□ -1.66
TCOF1-208ENST00000506063 UBN2Q6ZU65 1347 aa4.71□□□□□ -1.66
TCOF1-208ENST00000506063 CHD9Q3L8U1 2897 aa4.7□□□□□ -1.66
TCOF1-208ENST00000506063 LACTBP83111 547 aaPredicted RBP4.7□□□□□ -1.66
TCOF1-208ENST00000506063 TCIRG1Q13488 830 aa4.7□□□□□ -1.66
TCOF1-208ENST00000506063 SP8Q8IXZ3 490 aa4.7□□□□□ -1.66
TCOF1-208ENST00000506063 RBM17Q96I25 401 aaKnown RBP4.7□□□□□ -1.66
TCOF1-208ENST00000506063 PAWRQ96IZ0 340 aaKnown RBP4.7□□□□□ -1.66
TCOF1-208ENST00000506063 NECAB3Q96P71 396 aaPredicted RBP4.7□□□□□ -1.66
TCOF1-208ENST00000506063 UHRF1Q96T88 793 aaPredicted RBP4.7□□□□□ -1.66
TCOF1-208ENST00000506063 RNF208Q9H0X6 261 aa4.7□□□□□ -1.66
TCOF1-208ENST00000506063 UNC93B1Q9H1C4 597 aa4.7□□□□□ -1.66
TCOF1-208ENST00000506063 USP16Q9Y5T5 823 aa4.7□□□□□ -1.66
TCOF1-208ENST00000506063 EPG5Q9HCE0 2579 aa4.69□□□□□ -1.66
TCOF1-208ENST00000506063 KCNQ3O43525 872 aa4.69□□□□□ -1.66
TCOF1-208ENST00000506063 ECE2O60344 883 aa4.69□□□□□ -1.66
TCOF1-208ENST00000506063 NTSR2O95665 410 aa4.69□□□□□ -1.66
TCOF1-208ENST00000506063 FOSL2P15408 326 aa4.69□□□□□ -1.66
TCOF1-208ENST00000506063 GRK4P32298 578 aa4.69□□□□□ -1.66
TCOF1-208ENST00000506063 TTLL12Q14166 644 aaPredicted RBP4.69□□□□□ -1.66
TCOF1-208ENST00000506063 NBPF9Q3BBW0 867 aa4.69□□□□□ -1.66
TCOF1-208ENST00000506063 ZNF790Q6PG37 636 aa4.69□□□□□ -1.66
TCOF1-208ENST00000506063 BRI3BPQ8WY22 251 aa4.69□□□□□ -1.66
TCOF1-208ENST00000506063 NECTIN2Q92692 538 aa4.69□□□□□ -1.66
TCOF1-208ENST00000506063 ASB2Q96Q27 587 aa4.69□□□□□ -1.66
TCOF1-208ENST00000506063 TEX13AQ9BXU3 409 aaPredicted RBP4.69□□□□□ -1.66
TCOF1-208ENST00000506063 MYOZ2Q9NPC6 264 aa4.69□□□□□ -1.66
TCOF1-208ENST00000506063 PAK6Q9NQU5 681 aaPredicted RBP4.69□□□□□ -1.66
TCOF1-208ENST00000506063 SRRDQ9UH36 339 aa4.69□□□□□ -1.66
TCOF1-208ENST00000506063 ZNF652Q9Y2D9 606 aa4.69□□□□□ -1.66
TCOF1-208ENST00000506063 RIPOR2Q9Y4F9 1068 aa4.69□□□□□ -1.66
TCOF1-208ENST00000506063 FAM205AQ6ZU69 1335 aa4.69□□□□□ -1.66
TCOF1-208ENST00000506063 AK9Q5TCS8 1911 aa4.68□□□□□ -1.66
TCOF1-208ENST00000506063 FRMPD3Q5JV73 1810 aa4.68□□□□□ -1.66
TCOF1-208ENST00000506063 GNRH1P01148 92 aa4.68□□□□□ -1.66
TCOF1-208ENST00000506063 TNNT2P45379 298 aaPredicted RBP4.68□□□□□ -1.66
TCOF1-208ENST00000506063 PRMT2P55345 433 aa4.68□□□□□ -1.66
TCOF1-208ENST00000506063 PRKG1Q13976 671 aa4.68□□□□□ -1.66
TCOF1-208ENST00000506063 SUSD4Q5VX71 490 aa4.68□□□□□ -1.66
TCOF1-208ENST00000506063 ARMC9Q7Z3E5 817 aa4.68□□□□□ -1.66
TCOF1-208ENST00000506063 FAM43AQ8N2R8 423 aa4.68□□□□□ -1.66
TCOF1-208ENST00000506063 ATXN2LQ8WWM7 1075 aaKnown RBP4.68□□□□□ -1.66
TCOF1-208ENST00000506063 KHSRPQ92945 711 aaKnown RBP eCLIP4.68□□□□□ -1.66
TCOF1-208ENST00000506063 TRIM47Q96LD4 638 aa4.68□□□□□ -1.66
TCOF1-208ENST00000506063 POLLQ9UGP5 575 aa4.68□□□□□ -1.66
TCOF1-208ENST00000506063 ANGEL1Q9UNK9 670 aaKnown RBP4.68□□□□□ -1.66
TCOF1-208ENST00000506063 ADGRA2Q96PE1 1338 aa4.68□□□□□ -1.66
TCOF1-208ENST00000506063 TPRP12270 2363 aaKnown RBP4.68□□□□□ -1.66
TCOF1-208ENST00000506063 CHD8Q9HCK8 2581 aa4.67□□□□□ -1.66
TCOF1-208ENST00000506063 BRWD1Q9NSI6 2320 aa4.67□□□□□ -1.66
TCOF1-208ENST00000506063 WNT10BO00744 389 aa4.67□□□□□ -1.66
TCOF1-208ENST00000506063 TLR2O60603 784 aa4.67□□□□□ -1.66
TCOF1-208ENST00000506063 GPR37L1O60883 481 aa4.67□□□□□ -1.66
TCOF1-208ENST00000506063 BBOX1O75936 387 aa4.67□□□□□ -1.66
TCOF1-208ENST00000506063 OSBPP22059 807 aa4.67□□□□□ -1.66
TCOF1-208ENST00000506063 NHLH1Q02575 133 aa4.67□□□□□ -1.66
TCOF1-208ENST00000506063 ARHGEF6Q15052 776 aa4.67□□□□□ -1.66
TCOF1-208ENST00000506063 TAF1CQ15572 869 aaPredicted RBP4.67□□□□□ -1.66
TCOF1-208ENST00000506063 DOK7Q18PE1 504 aa4.67□□□□□ -1.66
TCOF1-208ENST00000506063 WASHC4Q2M389 1173 aa4.67□□□□□ -1.66
TCOF1-208ENST00000506063 SLC10A5Q5PT55 438 aa4.67□□□□□ -1.66
TCOF1-208ENST00000506063 SULT6B1Q6IMI4 303 aa4.67□□□□□ -1.66
TCOF1-208ENST00000506063 RSBN1LQ6PCB5 846 aaPredicted RBP4.67□□□□□ -1.66
TCOF1-208ENST00000506063 AGBL3Q8NEM8 1001 aa4.67□□□□□ -1.66
TCOF1-208ENST00000506063 SLC10A4Q96EP9 437 aa4.67□□□□□ -1.66
TCOF1-208ENST00000506063 NYXQ9GZU5 481 aa4.67□□□□□ -1.66
TCOF1-208ENST00000506063 PFASO15067 1338 aa4.67□□□□□ -1.66
TCOF1-208ENST00000506063 MYO15AQ9UKN7 3530 aa4.66□□□□□ -1.66
TCOF1-208ENST00000506063 PTPRZ1P23471 2315 aaPredicted RBP4.66□□□□□ -1.66
TCOF1-208ENST00000506063 TRIOO75962 3097 aa4.66□□□□□ -1.66
TCOF1-208ENST00000506063 RIMBP2O15034 1052 aa4.66□□□□□ -1.66
TCOF1-208ENST00000506063 KRT37O76014 449 aa4.66□□□□□ -1.66
TCOF1-208ENST00000506063 USP17L8P0C7I0 530 aa4.66□□□□□ -1.66
TCOF1-208ENST00000506063 BMP1P13497 986 aa4.66□□□□□ -1.66
TCOF1-208ENST00000506063 GTF2E1P29083 439 aaPredicted RBP4.66□□□□□ -1.66
TCOF1-208ENST00000506063 MDM2Q00987 491 aaPredicted RBP4.66□□□□□ -1.66
TCOF1-208ENST00000506063 MTHFSDQ2M296 383 aaKnown RBP4.66□□□□□ -1.66
TCOF1-208ENST00000506063 TMEM31Q5JXX7 168 aa4.66□□□□□ -1.66
TCOF1-208ENST00000506063 OTUD7BQ6GQQ9 843 aa4.66□□□□□ -1.66
TCOF1-208ENST00000506063 C17orf99Q6UX52 265 aa4.66□□□□□ -1.66
TCOF1-208ENST00000506063 NECAB2Q7Z6G3 386 aa4.66□□□□□ -1.66
TCOF1-208ENST00000506063 ZNF34Q8IZ26 560 aa4.66□□□□□ -1.66
TCOF1-208ENST00000506063 TTC5Q8N0Z6 440 aa4.66□□□□□ -1.66
TCOF1-208ENST00000506063 IL17REQ8NFR9 667 aa4.66□□□□□ -1.66
TCOF1-208ENST00000506063 ZBED3Q96IU2 234 aaPredicted RBP4.66□□□□□ -1.66
TCOF1-208ENST00000506063 DEFB118Q96PH6 123 aa4.66□□□□□ -1.66
TCOF1-208ENST00000506063 FMNL2Q96PY5 1086 aa4.66□□□□□ -1.66
TCOF1-208ENST00000506063 ZFYVE28Q9HCC9 887 aa4.66□□□□□ -1.66
TCOF1-208ENST00000506063 PLXNB2O15031 1838 aa4.66□□□□□ -1.66
TCOF1-208ENST00000506063 COL1A1P02452 1464 aaPredicted RBP4.66□□□□□ -1.66
TCOF1-208ENST00000506063 LRRC37A2A6NM11 1700 aa4.66□□□□□ -1.66
TCOF1-208ENST00000506063 CEMIPQ8WUJ3 1361 aa4.65□□□□□ -1.66
TCOF1-208ENST00000506063 PLXNA1Q9UIW2 1896 aa4.65□□□□□ -1.66
TCOF1-208ENST00000506063 FAM86C2PA6NEL3 165 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 UNCXA6NJT0 531 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 CAPN2P17655 700 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 GPTP24298 496 aa4.65□□□□□ -1.67
TCOF1-208ENST00000506063 IL13P35225 146 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms