RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 GALNT11Q8NCW6 608 aa6.61□□□□□ -1.35
HMGB1P29-201ENST00000505659 CCER1Q8TC90 406 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P29-201ENST00000505659 LENG1Q96BZ8 264 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P29-201ENST00000505659 NACC1Q96RE7 527 aa6.61□□□□□ -1.35
HMGB1P29-201ENST00000505659 ZKSCAN3Q9BRR0 538 aa6.61□□□□□ -1.35
HMGB1P29-201ENST00000505659 CARD10Q9BWT7 1032 aa6.61□□□□□ -1.35
HMGB1P29-201ENST00000505659 TPSG1Q9NRR2 321 aa6.61□□□□□ -1.35
HMGB1P29-201ENST00000505659 USP21Q9UK80 565 aa6.61□□□□□ -1.35
HMGB1P29-201ENST00000505659 C9orf172C9J069 976 aa6.6□□□□□ -1.35
HMGB1P29-201ENST00000505659 BRD1O95696 1058 aa6.6□□□□□ -1.35
HMGB1P29-201ENST00000505659 CDC27P30260 824 aa6.6□□□□□ -1.35
HMGB1P29-201ENST00000505659 EHHADHQ08426 723 aa6.6□□□□□ -1.35
HMGB1P29-201ENST00000505659 SUZ12Q15022 739 aaKnown RBP6.6□□□□□ -1.35
HMGB1P29-201ENST00000505659 PPME1Q9Y570 386 aa6.6□□□□□ -1.35
HMGB1P29-201ENST00000505659 NDUFB5O43674 189 aa6.59□□□□□ -1.35
HMGB1P29-201ENST00000505659 ORC1Q13415 861 aa6.59□□□□□ -1.35
HMGB1P29-201ENST00000505659 PEAR1Q5VY43 1037 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P29-201ENST00000505659 OSMRQ99650 979 aa6.59□□□□□ -1.35
HMGB1P29-201ENST00000505659 ZFYVE28Q9HCC9 887 aa6.59□□□□□ -1.35
HMGB1P29-201ENST00000505659 GNEQ9Y223 722 aaKnown RBP6.59□□□□□ -1.35
HMGB1P29-201ENST00000505659 AMOTL2Q9Y2J4 779 aa6.59□□□□□ -1.35
HMGB1P29-201ENST00000505659 PDE2AO00408 941 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P29-201ENST00000505659 TM4SF5O14894 197 aa6.58□□□□□ -1.36
HMGB1P29-201ENST00000505659 GPR182O15218 404 aa6.58□□□□□ -1.36
HMGB1P29-201ENST00000505659 ADAM23O75077 832 aa6.58□□□□□ -1.36
HMGB1P29-201ENST00000505659 ALX3O95076 343 aa6.58□□□□□ -1.36
HMGB1P29-201ENST00000505659 IGHA2P01877 340 aa6.58□□□□□ -1.36
HMGB1P29-201ENST00000505659 PTPRAP18433 802 aa6.58□□□□□ -1.36
HMGB1P29-201ENST00000505659 NOS3P29474 1203 aa6.58□□□□□ -1.36
HMGB1P29-201ENST00000505659 FOXD4L6Q3SYB3 417 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P29-201ENST00000505659 FOXD4L3Q6VB84 417 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P29-201ENST00000505659 TXNRD3Q86VQ6 643 aa6.58□□□□□ -1.36
HMGB1P29-201ENST00000505659 FAM129BQ96TA1 746 aa6.58□□□□□ -1.36
HMGB1P29-201ENST00000505659 KCNK4Q9NYG8 393 aa6.58□□□□□ -1.36
HMGB1P29-201ENST00000505659 METTL12A8MUP2 240 aa6.57□□□□□ -1.36
HMGB1P29-201ENST00000505659 K7ELQ4 463 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P29-201ENST00000505659 WISP1O95388 367 aa6.57□□□□□ -1.36
HMGB1P29-201ENST00000505659 IREB2P48200 963 aaKnown RBP6.57□□□□□ -1.36
HMGB1P29-201ENST00000505659 NRG1Q02297 640 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P29-201ENST00000505659 HGSNATQ68CP4 663 aa6.57□□□□□ -1.36
HMGB1P29-201ENST00000505659 IGF2-ASQ6U949 168 aa6.57□□□□□ -1.36
HMGB1P29-201ENST00000505659 AGGF1Q8N302 714 aaeCLIP6.57□□□□□ -1.36
HMGB1P29-201ENST00000505659 PMEPA1Q969W9 287 aa6.57□□□□□ -1.36
HMGB1P29-201ENST00000505659 ADAM19Q9H013 955 aa6.57□□□□□ -1.36
HMGB1P29-201ENST00000505659 BIN2Q9UBW5 565 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P29-201ENST00000505659 IVNS1ABPQ9Y6Y0 642 aa6.57□□□□□ -1.36
HMGB1P29-201ENST00000505659 FSCN2O14926 492 aa6.56□□□□□ -1.36
HMGB1P29-201ENST00000505659 DDX3YO15523 660 aaKnown RBP6.56□□□□□ -1.36
HMGB1P29-201ENST00000505659 EDN3P14138 238 aa6.56□□□□□ -1.36
HMGB1P29-201ENST00000505659 ITGB7P26010 798 aa6.56□□□□□ -1.36
HMGB1P29-201ENST00000505659 RSPO4Q2I0M5 234 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P29-201ENST00000505659 TMEM102Q8N9M5 508 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P29-201ENST00000505659 TMC1Q8TDI8 760 aa6.56□□□□□ -1.36
HMGB1P29-201ENST00000505659 WFDC12Q8WWY7 111 aa6.56□□□□□ -1.36
HMGB1P29-201ENST00000505659 NXPE3Q969Y0 559 aa6.56□□□□□ -1.36
HMGB1P29-201ENST00000505659 SOX13Q9UN79 622 aa6.56□□□□□ -1.36
HMGB1P29-201ENST00000505659 ADAM11O75078 769 aa6.55□□□□□ -1.36
HMGB1P29-201ENST00000505659 NKAPLQ5M9Q1 402 aa6.55□□□□□ -1.36
HMGB1P29-201ENST00000505659 CACTIN-AS1Q8N1I8 211 aa6.55□□□□□ -1.36
HMGB1P29-201ENST00000505659 ASAP3Q8TDY4 903 aa6.55□□□□□ -1.36
HMGB1P29-201ENST00000505659 FOXD4L4Q8WXT5 416 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P29-201ENST00000505659 MEGF10Q96KG7 1140 aa6.55□□□□□ -1.36
HMGB1P29-201ENST00000505659 SSBP4Q9BWG4 385 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P29-201ENST00000505659 NIF3L1Q9GZT8 377 aa6.55□□□□□ -1.36
HMGB1P29-201ENST00000505659 MUC3BQ9H195 1237 aa6.55□□□□□ -1.36
HMGB1P29-201ENST00000505659 A0A1W2PP55 124 aa6.54□□□□□ -1.36
HMGB1P29-201ENST00000505659 F8W735 103 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P29-201ENST00000505659 H3BRJ5 948 aa6.54□□□□□ -1.36
HMGB1P29-201ENST00000505659 VN1R5Q7Z5H4 357 aa6.54□□□□□ -1.36
HMGB1P29-201ENST00000505659 MAP4K3Q8IVH8 894 aa6.54□□□□□ -1.36
HMGB1P29-201ENST00000505659 GALNT12Q8IXK2 581 aa6.54□□□□□ -1.36
HMGB1P29-201ENST00000505659 UBASH3BQ8TF42 649 aa6.54□□□□□ -1.36
HMGB1P29-201ENST00000505659 SLC7A3Q8WY07 619 aa6.54□□□□□ -1.36
HMGB1P29-201ENST00000505659 KLHDC7BQ96G42 594 aa6.54□□□□□ -1.36
HMGB1P29-201ENST00000505659 SEMA6BQ9H3T3 888 aa6.54□□□□□ -1.36
HMGB1P29-201ENST00000505659 SRA1Q9HD15 236 aaKnown RBP6.54□□□□□ -1.36
HMGB1P29-201ENST00000505659 CD68P34810 354 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P29-201ENST00000505659 PDE3BQ13370 1112 aa6.53□□□□□ -1.36
HMGB1P29-201ENST00000505659 TMC7Q7Z402 723 aa6.53□□□□□ -1.36
HMGB1P29-201ENST00000505659 TP53INP1Q96A56 240 aa6.53□□□□□ -1.36
HMGB1P29-201ENST00000505659 TRAIPQ9BWF2 469 aa6.53□□□□□ -1.36
HMGB1P29-201ENST00000505659 BHLHE41Q9C0J9 482 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P29-201ENST00000505659 MRPL18Q9H0U6 180 aaKnown RBP6.53□□□□□ -1.36
HMGB1P29-201ENST00000505659 AKTIPQ9H8T0 292 aa6.53□□□□□ -1.36
HMGB1P29-201ENST00000505659 NPHS2Q9NP85 383 aa6.53□□□□□ -1.36
HMGB1P29-201ENST00000505659 FAM177BA6PVY3 158 aa6.52□□□□□ -1.37
HMGB1P29-201ENST00000505659 EIF1AYO14602 144 aaKnown RBP6.52□□□□□ -1.37
HMGB1P29-201ENST00000505659 DYRK3O43781 588 aa6.52□□□□□ -1.37
HMGB1P29-201ENST00000505659 CPNE3O75131 537 aaKnown RBP6.52□□□□□ -1.37
HMGB1P29-201ENST00000505659 CABP4P57796 275 aa6.52□□□□□ -1.37
HMGB1P29-201ENST00000505659 NLRP12P59046 1061 aa6.52□□□□□ -1.37
HMGB1P29-201ENST00000505659 SPRED3Q2MJR0 410 aa6.52□□□□□ -1.37
HMGB1P29-201ENST00000505659 FAM117BQ6P1L5 589 aa6.52□□□□□ -1.37
HMGB1P29-201ENST00000505659 ACAD11Q709F0 780 aa6.52□□□□□ -1.37
HMGB1P29-201ENST00000505659 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.52□□□□□ -1.37
HMGB1P29-201ENST00000505659 BSNDQ8WZ55 320 aa6.52□□□□□ -1.37
HMGB1P29-201ENST00000505659 TCF12Q99081 682 aa6.52□□□□□ -1.37
HMGB1P29-201ENST00000505659 RBCK1Q9BYM8 510 aa6.52□□□□□ -1.37
HMGB1P29-201ENST00000505659 SEC31BQ9NQW1 1179 aa6.52□□□□□ -1.37
HMGB1P29-201ENST00000505659 MAPK1P28482 360 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms