RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 DZANK1Q9NVP4 752 aa9.05□□□□□ -0.96
UBE2D3-218ENST00000505009 PPME1Q9Y570 386 aa9.05□□□□□ -0.96
UBE2D3-218ENST00000505009 EPHA1P21709 976 aa9.04□□□□□ -0.96
UBE2D3-218ENST00000505009 CDC27P30260 824 aa9.04□□□□□ -0.96
UBE2D3-218ENST00000505009 TXNRD3Q86VQ6 643 aa9.04□□□□□ -0.96
UBE2D3-218ENST00000505009 GALNT11Q8NCW6 608 aa9.04□□□□□ -0.96
UBE2D3-218ENST00000505009 SNX29Q8TEQ0 813 aa9.04□□□□□ -0.96
UBE2D3-218ENST00000505009 ITGB7P26010 798 aa9.03□□□□□ -0.96
UBE2D3-218ENST00000505009 NRG1Q02297 640 aaPredicted RBP9.03□□□□□ -0.96
UBE2D3-218ENST00000505009 EHHADHQ08426 723 aa9.03□□□□□ -0.96
UBE2D3-218ENST00000505009 RSPO4Q2I0M5 234 aaPredicted RBP9.03□□□□□ -0.96
UBE2D3-218ENST00000505009 IGF2-ASQ6U949 168 aa9.03□□□□□ -0.96
UBE2D3-218ENST00000505009 CARD10Q9BWT7 1032 aa9.03□□□□□ -0.96
UBE2D3-218ENST00000505009 LATS2Q9NRM7 1088 aa9.03□□□□□ -0.96
UBE2D3-218ENST00000505009 BRPF3Q9ULD4 1205 aa9.03□□□□□ -0.96
UBE2D3-218ENST00000505009 POLR3DP05423 398 aaPredicted RBP9.02□□□□□ -0.97
UBE2D3-218ENST00000505009 IREB2P48200 963 aaKnown RBP9.02□□□□□ -0.97
UBE2D3-218ENST00000505009 WFDC12Q8WWY7 111 aa9.02□□□□□ -0.97
UBE2D3-218ENST00000505009 ZKSCAN3Q9BRR0 538 aa9.02□□□□□ -0.97
UBE2D3-218ENST00000505009 PDE2AO00408 941 aaPredicted RBP9.01□□□□□ -0.97
UBE2D3-218ENST00000505009 TM4SF5O14894 197 aa9.01□□□□□ -0.97
UBE2D3-218ENST00000505009 ALX3O95076 343 aa9.01□□□□□ -0.97
UBE2D3-218ENST00000505009 PTPRAP18433 802 aa9.01□□□□□ -0.97
UBE2D3-218ENST00000505009 NOS3P29474 1203 aa9.01□□□□□ -0.97
UBE2D3-218ENST00000505009 NKAPLQ5M9Q1 402 aa9.01□□□□□ -0.97
UBE2D3-218ENST00000505009 PMEPA1Q969W9 287 aa9.01□□□□□ -0.97
UBE2D3-218ENST00000505009 OSMRQ99650 979 aa9.01□□□□□ -0.97
UBE2D3-218ENST00000505009 ADAM19Q9H013 955 aa9.01□□□□□ -0.97
UBE2D3-218ENST00000505009 SEMA6BQ9H3T3 888 aa9.01□□□□□ -0.97
UBE2D3-218ENST00000505009 ZFYVE28Q9HCC9 887 aa9.01□□□□□ -0.97
UBE2D3-218ENST00000505009 PEAR1Q5VY43 1037 aaPredicted RBP9□□□□□ -0.97
UBE2D3-218ENST00000505009 CACTIN-AS1Q8N1I8 211 aa9□□□□□ -0.97
UBE2D3-218ENST00000505009 CCER1Q8TC90 406 aaPredicted RBP9□□□□□ -0.97
UBE2D3-218ENST00000505009 MUC3BQ9H195 1237 aa9□□□□□ -0.97
UBE2D3-218ENST00000505009 KCNK4Q9NYG8 393 aa9□□□□□ -0.97
UBE2D3-218ENST00000505009 SOWAHDA6NJG2 315 aa8.99□□□□□ -0.97
UBE2D3-218ENST00000505009 WISP1O95388 367 aa8.99□□□□□ -0.97
UBE2D3-218ENST00000505009 FOXD4L6Q3SYB3 417 aaPredicted RBP8.99□□□□□ -0.97
UBE2D3-218ENST00000505009 USPL1Q5W0Q7 1092 aa8.99□□□□□ -0.97
UBE2D3-218ENST00000505009 FOXD4L3Q6VB84 417 aaPredicted RBP8.99□□□□□ -0.97
UBE2D3-218ENST00000505009 AGGF1Q8N302 714 aaeCLIP8.99□□□□□ -0.97
UBE2D3-218ENST00000505009 SSBP4Q9BWG4 385 aaPredicted RBP8.99□□□□□ -0.97
UBE2D3-218ENST00000505009 AMOTL2Q9Y2J4 779 aa8.99□□□□□ -0.97
UBE2D3-218ENST00000505009 FSCN2O14926 492 aa8.98□□□□□ -0.97
UBE2D3-218ENST00000505009 NDUFB5O43674 189 aa8.98□□□□□ -0.97
UBE2D3-218ENST00000505009 EDN3P14138 238 aa8.98□□□□□ -0.97
UBE2D3-218ENST00000505009 HGSNATQ68CP4 663 aa8.98□□□□□ -0.97
UBE2D3-218ENST00000505009 MAP4K3Q8IVH8 894 aa8.98□□□□□ -0.97
UBE2D3-218ENST00000505009 TMEM102Q8N9M5 508 aaPredicted RBP8.98□□□□□ -0.97
UBE2D3-218ENST00000505009 NXPE3Q969Y0 559 aa8.98□□□□□ -0.97
UBE2D3-218ENST00000505009 MEGF10Q96KG7 1140 aa8.98□□□□□ -0.97
UBE2D3-218ENST00000505009 SRA1Q9HD15 236 aaKnown RBP8.98□□□□□ -0.97
UBE2D3-218ENST00000505009 F8W735 103 aaPredicted RBP8.97□□□□□ -0.97
UBE2D3-218ENST00000505009 DDX3YO15523 660 aaKnown RBP8.97□□□□□ -0.97
UBE2D3-218ENST00000505009 BRD1O95696 1058 aa8.97□□□□□ -0.97
UBE2D3-218ENST00000505009 ORC1Q13415 861 aa8.97□□□□□ -0.97
UBE2D3-218ENST00000505009 TP53INP1Q96A56 240 aa8.97□□□□□ -0.97
UBE2D3-218ENST00000505009 KLHDC7BQ96G42 594 aa8.97□□□□□ -0.97
UBE2D3-218ENST00000505009 FAM129BQ96TA1 746 aa8.97□□□□□ -0.97
UBE2D3-218ENST00000505009 MRPL18Q9H0U6 180 aaKnown RBP8.97□□□□□ -0.97
UBE2D3-218ENST00000505009 SOX13Q9UN79 622 aa8.97□□□□□ -0.97
UBE2D3-218ENST00000505009 METTL12A8MUP2 240 aa8.96□□□□□ -0.98
UBE2D3-218ENST00000505009 GPR182O15218 404 aa8.96□□□□□ -0.98
UBE2D3-218ENST00000505009 DYRK3O43781 588 aa8.96□□□□□ -0.98
UBE2D3-218ENST00000505009 ADAM11O75078 769 aa8.96□□□□□ -0.98
UBE2D3-218ENST00000505009 IGHA2P01877 340 aa8.96□□□□□ -0.98
UBE2D3-218ENST00000505009 CD68P34810 354 aaPredicted RBP8.96□□□□□ -0.98
UBE2D3-218ENST00000505009 AKTIPQ9H8T0 292 aa8.96□□□□□ -0.98
UBE2D3-218ENST00000505009 GNEQ9Y223 722 aaKnown RBP8.96□□□□□ -0.98
UBE2D3-218ENST00000505009 H3BRJ5 948 aa8.95□□□□□ -0.98
UBE2D3-218ENST00000505009 FOXD4L4Q8WXT5 416 aaPredicted RBP8.95□□□□□ -0.98
UBE2D3-218ENST00000505009 LOC100996750A0A140TA64 210 aa8.94□□□□□ -0.98
UBE2D3-218ENST00000505009 FAM117BQ6P1L5 589 aa8.94□□□□□ -0.98
UBE2D3-218ENST00000505009 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.94□□□□□ -0.98
UBE2D3-218ENST00000505009 VN1R5Q7Z5H4 357 aa8.94□□□□□ -0.98
UBE2D3-218ENST00000505009 TMEM130Q8N3G9 435 aa8.94□□□□□ -0.98
UBE2D3-218ENST00000505009 TMC1Q8TDI8 760 aa8.94□□□□□ -0.98
UBE2D3-218ENST00000505009 ASAP3Q8TDY4 903 aa8.94□□□□□ -0.98
UBE2D3-218ENST00000505009 UBASH3BQ8TF42 649 aa8.94□□□□□ -0.98
UBE2D3-218ENST00000505009 SLC7A3Q8WY07 619 aa8.94□□□□□ -0.98
UBE2D3-218ENST00000505009 KRTAP4-6Q9BYQ5 205 aa8.94□□□□□ -0.98
UBE2D3-218ENST00000505009 SEC31BQ9NQW1 1179 aa8.94□□□□□ -0.98
UBE2D3-218ENST00000505009 BIN2Q9UBW5 565 aaPredicted RBP8.94□□□□□ -0.98
UBE2D3-218ENST00000505009 A0A1W2PP55 124 aa8.93□□□□□ -0.98
UBE2D3-218ENST00000505009 FAM177BA6PVY3 158 aa8.93□□□□□ -0.98
UBE2D3-218ENST00000505009 GALNT12Q8IXK2 581 aa8.93□□□□□ -0.98
UBE2D3-218ENST00000505009 BSNDQ8WZ55 320 aa8.93□□□□□ -0.98
UBE2D3-218ENST00000505009 BHLHE41Q9C0J9 482 aaPredicted RBP8.93□□□□□ -0.98
UBE2D3-218ENST00000505009 NIF3L1Q9GZT8 377 aa8.93□□□□□ -0.98
UBE2D3-218ENST00000505009 CABP4P57796 275 aa8.92□□□□□ -0.98
UBE2D3-218ENST00000505009 PDE3BQ13370 1112 aa8.92□□□□□ -0.98
UBE2D3-218ENST00000505009 ACAD11Q709F0 780 aa8.92□□□□□ -0.98
UBE2D3-218ENST00000505009 KLHL23Q8NBE8 558 aa8.92□□□□□ -0.98
UBE2D3-218ENST00000505009 SOX1O00570 391 aaPredicted RBP8.91□□□□□ -0.98
UBE2D3-218ENST00000505009 NLRP12P59046 1061 aa8.91□□□□□ -0.98
UBE2D3-218ENST00000505009 PIP4K2BP78356 416 aa8.91□□□□□ -0.98
UBE2D3-218ENST00000505009 KIAA1211Q6ZU35 1233 aa8.91□□□□□ -0.98
UBE2D3-218ENST00000505009 DZIP1LQ8IYY4 767 aaKnown RBP8.91□□□□□ -0.98
UBE2D3-218ENST00000505009 IVNS1ABPQ9Y6Y0 642 aa8.91□□□□□ -0.98
UBE2D3-218ENST00000505009 H2AFB1P0C5Y9 115 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms