RNA–Protein interactions for RNA: ENST00000494454.5

TXNRD2-215, Transcript of thioredoxin reductase 2, human

TSL 1 (best)

Gene TXNRD2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TXNRD2-215	ENST00000494454	CCDC102B	Q68D86	513 aa		18.9	■□□□□ 0.62
TXNRD2-215	ENST00000494454	HELB	Q8NG08	1087 aa	Predicted RBP	18.9	■□□□□ 0.62
TXNRD2-215	ENST00000494454	IGHMBP2	P38935	993 aa	Known RBP	18.89	■□□□□ 0.61
TXNRD2-215	ENST00000494454	AMIGO3	Q86WK7	504 aa		18.89	■□□□□ 0.61
TXNRD2-215	ENST00000494454	OSBP2	Q969R2	916 aa		18.89	■□□□□ 0.61
TXNRD2-215	ENST00000494454	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.89	■□□□□ 0.61
TXNRD2-215	ENST00000494454	QTRT2	Q9H974	415 aa	Known RBP	18.89	■□□□□ 0.61
TXNRD2-215	ENST00000494454	SRP68	Q9UHB9	627 aa	Known RBP	18.89	■□□□□ 0.61
TXNRD2-215	ENST00000494454	RTCB	Q9Y3I0	505 aa	Known RBP	18.89	■□□□□ 0.61
TXNRD2-215	ENST00000494454	COL4A1	P02462	1669 aa		18.89	■□□□□ 0.61
TXNRD2-215	ENST00000494454		M0R2C6	588 aa		18.88	■□□□□ 0.61
TXNRD2-215	ENST00000494454	RPS6KB1	P23443	525 aa		18.88	■□□□□ 0.61
TXNRD2-215	ENST00000494454	PHKA1	P46020	1223 aa		18.88	■□□□□ 0.61
TXNRD2-215	ENST00000494454	BLOC1S2	Q6QNY1	142 aa		18.88	■□□□□ 0.61
TXNRD2-215	ENST00000494454	C3orf67	Q6ZVT6	689 aa		18.88	■□□□□ 0.61
TXNRD2-215	ENST00000494454	ZSCAN31	Q96LW9	406 aa	Predicted RBP	18.88	■□□□□ 0.61
TXNRD2-215	ENST00000494454	C4B	P0C0L5	1744 aa		18.88	■□□□□ 0.61
TXNRD2-215	ENST00000494454	TRAK2	O60296	914 aa		18.88	■□□□□ 0.61
TXNRD2-215	ENST00000494454	CYP21A2	P08686	494 aa		18.88	■□□□□ 0.61
TXNRD2-215	ENST00000494454	UQCRFS1P1	P0C7P4	283 aa		18.88	■□□□□ 0.61
TXNRD2-215	ENST00000494454	SLC5A1	P13866	664 aa		18.88	■□□□□ 0.61
TXNRD2-215	ENST00000494454	LARP6	Q9BRS8	491 aa	Known RBP	18.88	■□□□□ 0.61
TXNRD2-215	ENST00000494454	SH2B1	Q9NRF2	756 aa	Predicted RBP	18.88	■□□□□ 0.61
TXNRD2-215	ENST00000494454	LARGE1	O95461	756 aa		18.87	■□□□□ 0.61
TXNRD2-215	ENST00000494454	HSPD1	P10809	573 aa	Known RBP	18.87	■□□□□ 0.61
TXNRD2-215	ENST00000494454	BICDL1	Q6ZP65	573 aa		18.87	■□□□□ 0.61
TXNRD2-215	ENST00000494454	CDC5L	Q99459	802 aa	Known RBP	18.87	■□□□□ 0.61
TXNRD2-215	ENST00000494454	ZPR1	O75312	459 aa		18.86	■□□□□ 0.61
TXNRD2-215	ENST00000494454	BRD1	O95696	1058 aa		18.86	■□□□□ 0.61
TXNRD2-215	ENST00000494454	PTMS	P20962	102 aa		18.86	■□□□□ 0.61
TXNRD2-215	ENST00000494454	APPBP2	Q92624	585 aa		18.86	■□□□□ 0.61
TXNRD2-215	ENST00000494454	ARHGEF1	Q92888	912 aa	Known RBP	18.86	■□□□□ 0.61
TXNRD2-215	ENST00000494454	TTF1	Q15361	905 aa	Predicted RBP	18.86	■□□□□ 0.61
TXNRD2-215	ENST00000494454	SETDB2	Q96T68	719 aa		18.86	■□□□□ 0.61
TXNRD2-215	ENST00000494454	NYX	Q9GZU5	481 aa		18.86	■□□□□ 0.61
TXNRD2-215	ENST00000494454	CASZ1	Q86V15	1759 aa		18.85	■□□□□ 0.61
TXNRD2-215	ENST00000494454	MYH7	P12883	1935 aa		18.85	■□□□□ 0.61
TXNRD2-215	ENST00000494454	C4A	P0C0L4	1744 aa		18.85	■□□□□ 0.61
TXNRD2-215	ENST00000494454	SNAP23	O00161	211 aa		18.84	■□□□□ 0.61
TXNRD2-215	ENST00000494454	CHRND	Q07001	517 aa		18.84	■□□□□ 0.61
TXNRD2-215	ENST00000494454	ANKRD1	Q15327	319 aa		18.84	■□□□□ 0.61
TXNRD2-215	ENST00000494454	ME3	Q16798	604 aa		18.84	■□□□□ 0.61
TXNRD2-215	ENST00000494454	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	18.84	■□□□□ 0.61	2e-7	■■■■□ 26.1
TXNRD2-215	ENST00000494454	PIH1D3	Q9NQM4	214 aa	Known RBP	18.84	■□□□□ 0.61
TXNRD2-215	ENST00000494454	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	18.84	■□□□□ 0.61
TXNRD2-215	ENST00000494454	FOXP2	O15409	715 aa		18.84	■□□□□ 0.61
TXNRD2-215	ENST00000494454	ST3GAL1	Q11201	340 aa		18.84	■□□□□ 0.61
TXNRD2-215	ENST00000494454	TOB2	Q14106	344 aa	Predicted RBP	18.84	■□□□□ 0.61
TXNRD2-215	ENST00000494454	NEK1	Q96PY6	1258 aa		18.84	■□□□□ 0.61
TXNRD2-215	ENST00000494454	LRRC4B	Q9NT99	713 aa		18.84	■□□□□ 0.61
TXNRD2-215	ENST00000494454	TPCN1	Q9ULQ1	816 aa		18.84	■□□□□ 0.61
TXNRD2-215	ENST00000494454	ADD2	P35612	726 aa		18.83	■□□□□ 0.61
TXNRD2-215	ENST00000494454	WASHC4	Q2M389	1173 aa		18.83	■□□□□ 0.61
TXNRD2-215	ENST00000494454	ZSCAN25	Q6NSZ9	544 aa		18.83	■□□□□ 0.61
TXNRD2-215	ENST00000494454	STOX1	Q6ZVD7	989 aa		18.83	■□□□□ 0.61
TXNRD2-215	ENST00000494454	GOLGA6L22	H0YM25	854 aa		18.83	■□□□□ 0.6
TXNRD2-215	ENST00000494454	RASGRF1	Q13972	1273 aa		18.83	■□□□□ 0.6
TXNRD2-215	ENST00000494454	NBPF5P	Q86XG9	351 aa	Predicted RBP	18.83	■□□□□ 0.6
TXNRD2-215	ENST00000494454	ANKRD18A	Q8IVF6	992 aa		18.83	■□□□□ 0.6
TXNRD2-215	ENST00000494454	TCEANC2	Q96MN5	208 aa		18.83	■□□□□ 0.6
TXNRD2-215	ENST00000494454	PUS7L	Q9H0K6	701 aa	Known RBP	18.83	■□□□□ 0.6
TXNRD2-215	ENST00000494454	BSDC1	Q9NW68	430 aa	Predicted RBP	18.83	■□□□□ 0.6
TXNRD2-215	ENST00000494454	GTF2E1	P29083	439 aa	Predicted RBP	18.82	■□□□□ 0.6
TXNRD2-215	ENST00000494454	FAM196A	Q6ZSG2	479 aa		18.82	■□□□□ 0.6
TXNRD2-215	ENST00000494454	SPATA5	Q8NB90	893 aa		18.82	■□□□□ 0.6
TXNRD2-215	ENST00000494454		A0A1B0GUL6	1792 aa		18.82	■□□□□ 0.6
TXNRD2-215	ENST00000494454	UBE3C	Q15386	1083 aa		18.81	■□□□□ 0.6
TXNRD2-215	ENST00000494454	SKOR2	Q2VWA4	1001 aa	Predicted RBP	18.81	■□□□□ 0.6
TXNRD2-215	ENST00000494454	TRAPPC3L	Q5T215	181 aa		18.81	■□□□□ 0.6
TXNRD2-215	ENST00000494454	CCDC83	Q8IWF9	413 aa		18.81	■□□□□ 0.6
TXNRD2-215	ENST00000494454	SLC9C2	Q5TAH2	1124 aa		18.81	■□□□□ 0.6
TXNRD2-215	ENST00000494454	TPTE2	Q6XPS3	522 aa		18.81	■□□□□ 0.6
TXNRD2-215	ENST00000494454	HMGB1	P09429	215 aa	Known RBP	18.8	■□□□□ 0.6
TXNRD2-215	ENST00000494454	ADRA2B	P18089	450 aa		18.8	■□□□□ 0.6
TXNRD2-215	ENST00000494454	RFC4	P35249	363 aa		18.8	■□□□□ 0.6
TXNRD2-215	ENST00000494454	KRT27	Q7Z3Y8	459 aa		18.8	■□□□□ 0.6
TXNRD2-215	ENST00000494454	SMC3	Q9UQE7	1217 aa		18.8	■□□□□ 0.6
TXNRD2-215	ENST00000494454	BRWD3	Q6RI45	1802 aa		18.8	■□□□□ 0.6
TXNRD2-215	ENST00000494454		A0A0G2JLW4	131 aa		18.79	■□□□□ 0.6
TXNRD2-215	ENST00000494454	TCRBV5S4A2T	A0A5A2	114 aa		18.79	■□□□□ 0.6
TXNRD2-215	ENST00000494454	GPAA1	O43292	621 aa		18.79	■□□□□ 0.6
TXNRD2-215	ENST00000494454	PDE6A	P16499	860 aa		18.79	■□□□□ 0.6
TXNRD2-215	ENST00000494454	BCAM	P50895	628 aa		18.79	■□□□□ 0.6
TXNRD2-215	ENST00000494454	MCTP1	Q6DN14	999 aa		18.79	■□□□□ 0.6
TXNRD2-215	ENST00000494454	NLRP3	Q96P20	1036 aa		18.79	■□□□□ 0.6
TXNRD2-215	ENST00000494454	CTNNA3	Q9UI47	895 aa		18.79	■□□□□ 0.6
TXNRD2-215	ENST00000494454	WDR33	Q9C0J8	1336 aa	Known RBP	18.79	■□□□□ 0.6
TXNRD2-215	ENST00000494454	DOCK2	Q92608	1830 aa		18.79	■□□□□ 0.6
TXNRD2-215	ENST00000494454	IDH1	O75874	414 aa	Known RBP	18.79	■□□□□ 0.6
TXNRD2-215	ENST00000494454	TTLL5	Q6EMB2	1281 aa		18.79	■□□□□ 0.6
TXNRD2-215	ENST00000494454	CELF1	Q92879	486 aa	Known RBP	18.79	■□□□□ 0.6
TXNRD2-215	ENST00000494454	ZNF804B	A4D1E1	1349 aa		18.79	■□□□□ 0.6
TXNRD2-215	ENST00000494454	TAF1	P21675	1872 aa		18.79	■□□□□ 0.6
TXNRD2-215	ENST00000494454	MYO5A	Q9Y4I1	1855 aa	Known RBP	18.79	■□□□□ 0.6
TXNRD2-215	ENST00000494454	PHF14	O94880	888 aa		18.78	■□□□□ 0.6
TXNRD2-215	ENST00000494454	DHX32	Q7L7V1	743 aa	Known RBP	18.78	■□□□□ 0.6
TXNRD2-215	ENST00000494454	NECAB1	Q8N987	351 aa		18.78	■□□□□ 0.6
TXNRD2-215	ENST00000494454	WWC3	Q9ULE0	1092 aa		18.78	■□□□□ 0.6
TXNRD2-215	ENST00000494454	MINPP1	Q9UNW1	487 aa		18.78	■□□□□ 0.6
TXNRD2-215	ENST00000494454	LAMA4	Q16363	1823 aa		18.78	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms