RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TSHZ3Q63HK5 1081 aa27.55■■■□□ 2
USF3-203ENST00000491165 CCDC8Q9H0W5 538 aaPredicted RBP27.55■■■□□ 2
USF3-203ENST00000491165 ZNF609O15014 1411 aa27.55■■■□□ 2
USF3-203ENST00000491165 PTMSP20962 102 aa27.54■■■□□ 2
USF3-203ENST00000491165 STYK1Q6J9G0 422 aa27.54■■■□□ 2
USF3-203ENST00000491165 AACSQ86V21 672 aa27.54■■■□□ 2
USF3-203ENST00000491165 CLASRPQ8N2M8 674 aaKnown RBP27.54■■■□□ 2
USF3-203ENST00000491165 WWC3Q9ULE0 1092 aa27.54■■■□□ 2
USF3-203ENST00000491165 MRE11P49959 708 aa27.53■■■□□ 2
USF3-203ENST00000491165 ALDH1B1P30837 517 aa27.53■■■□□ 2
USF3-203ENST00000491165 ISY1Q9ULR0 285 aaKnown RBP27.53■■■□□ 2
USF3-203ENST00000491165 LTBP1Q14766 1721 aa27.52■■■□□ 2
USF3-203ENST00000491165 PPEF1O14829 653 aaPredicted RBP27.52■■■□□ 2
USF3-203ENST00000491165 BBOX1O75936 387 aa27.52■■■□□ 2
USF3-203ENST00000491165 PRPF40BQ6NWY9 871 aaKnown RBP27.52■■■□□ 2
USF3-203ENST00000491165 A0A1B0GUL7 405 aa27.52■■■□□ 2
USF3-203ENST00000491165 DBNLQ9UJU6 430 aaKnown RBP27.52■■■□□ 2
USF3-203ENST00000491165 NLGN2Q8NFZ4 835 aa27.51■■□□□ 1.99
USF3-203ENST00000491165 TGFB2P61812 414 aa27.5■■□□□ 1.99
USF3-203ENST00000491165 FOXD4L1Q9NU39 408 aa27.5■■□□□ 1.99
USF3-203ENST00000491165 CD2APQ9Y5K6 639 aa27.5■■□□□ 1.99
USF3-203ENST00000491165 FGFR2P21802 821 aa27.5■■□□□ 1.99
USF3-203ENST00000491165 RABEP1Q15276 862 aa27.5■■□□□ 1.99
USF3-203ENST00000491165 SKOR2Q2VWA4 1001 aaPredicted RBP27.5■■□□□ 1.99
USF3-203ENST00000491165 DBNDD2Q9BQY9 259 aa27.5■■□□□ 1.99
USF3-203ENST00000491165 ADORA1P30542 326 aa27.49■■□□□ 1.99
USF3-203ENST00000491165 GPR108Q9NPR9 543 aa27.49■■□□□ 1.99
USF3-203ENST00000491165 ARAP2Q8WZ64 1704 aa27.49■■□□□ 1.99
USF3-203ENST00000491165 NEUROD6Q96NK8 337 aa27.49■■□□□ 1.99
USF3-203ENST00000491165 PANK2Q9BZ23 570 aa27.49■■□□□ 1.99
USF3-203ENST00000491165 ATP6V0A2Q9Y487 856 aa27.49■■□□□ 1.99
USF3-203ENST00000491165 ATP2B3Q16720 1220 aa27.48■■□□□ 1.99
USF3-203ENST00000491165 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.48■■□□□ 1.99
USF3-203ENST00000491165 ZNF219Q9P2Y4 722 aaPredicted RBP27.48■■□□□ 1.99
USF3-203ENST00000491165 GPSM2P81274 684 aa27.47■■□□□ 1.99
USF3-203ENST00000491165 CNKSR1Q969H4 720 aa27.47■■□□□ 1.99
USF3-203ENST00000491165 IFIT2P09913 472 aaKnown RBP27.47■■□□□ 1.99
USF3-203ENST00000491165 MX1P20591 662 aa27.47■■□□□ 1.99
USF3-203ENST00000491165 KLRK1P26718 216 aa27.47■■□□□ 1.99
USF3-203ENST00000491165 PDE1AP54750 535 aa27.47■■□□□ 1.99
USF3-203ENST00000491165 PUM3Q15397 648 aaKnown RBP27.47■■□□□ 1.99
USF3-203ENST00000491165 C7orf43Q8WVR3 580 aa27.47■■□□□ 1.99
USF3-203ENST00000491165 FHDC1Q9C0D6 1143 aaPredicted RBP27.47■■□□□ 1.99
USF3-203ENST00000491165 DUOX1Q9NRD9 1551 aa27.47■■□□□ 1.99
USF3-203ENST00000491165 CASC1Q6TDU7 716 aa27.46■■□□□ 1.99
USF3-203ENST00000491165 SP8Q8IXZ3 490 aa27.46■■□□□ 1.99
USF3-203ENST00000491165 GRPEL1Q9HAV7 217 aa27.46■■□□□ 1.99
USF3-203ENST00000491165 NSFL1CQ9UNZ2 370 aaKnown RBP27.46■■□□□ 1.99
USF3-203ENST00000491165 USP26Q9BXU7 913 aa27.46■■□□□ 1.99
USF3-203ENST00000491165 RRAGDQ9NQL2 400 aaPredicted RBP27.46■■□□□ 1.99
USF3-203ENST00000491165 ANKIB1Q9P2G1 1089 aa27.46■■□□□ 1.99
USF3-203ENST00000491165 AKAP2Q9Y2D5 859 aa27.46■■□□□ 1.99
USF3-203ENST00000491165 TTLL6Q8N841 843 aa27.45■■□□□ 1.98
USF3-203ENST00000491165 XAGE2Q96GT9 111 aa27.45■■□□□ 1.98
USF3-203ENST00000491165 GPR101Q96P66 508 aaPredicted RBP27.44■■□□□ 1.98
USF3-203ENST00000491165 SNED1Q8TER0 1413 aa27.44■■□□□ 1.98
USF3-203ENST00000491165 LPIN2Q92539 896 aa27.44■■□□□ 1.98
USF3-203ENST00000491165 SDSP20132 328 aa27.43■■□□□ 1.98
USF3-203ENST00000491165 TXNRD3Q86VQ6 643 aa27.43■■□□□ 1.98
USF3-203ENST00000491165 ANKRD2Q9GZV1 360 aa27.43■■□□□ 1.98
USF3-203ENST00000491165 XDHP47989 1333 aa27.43■■□□□ 1.98
USF3-203ENST00000491165 TMC4Q7Z404 712 aa27.43■■□□□ 1.98
USF3-203ENST00000491165 PI4K2BQ8TCG2 481 aa27.43■■□□□ 1.98
USF3-203ENST00000491165 POLLQ9UGP5 575 aa27.43■■□□□ 1.98
USF3-203ENST00000491165 C21orf2O43822 256 aa27.42■■□□□ 1.98
USF3-203ENST00000491165 PIM2Q9P1W9 311 aa27.42■■□□□ 1.98
USF3-203ENST00000491165 STAP2Q9UGK3 403 aa27.42■■□□□ 1.98
USF3-203ENST00000491165 CLEC17AQ6ZS10 378 aa27.41■■□□□ 1.98
USF3-203ENST00000491165 ZNF804BA4D1E1 1349 aa27.41■■□□□ 1.98
USF3-203ENST00000491165 IRS2Q9Y4H2 1338 aa27.41■■□□□ 1.98
USF3-203ENST00000491165 GOLGA6L22H0YM25 854 aa27.41■■□□□ 1.98
USF3-203ENST00000491165 UBE4AQ14139 1066 aa27.41■■□□□ 1.98
USF3-203ENST00000491165 OSBPL3Q9H4L5 887 aa27.41■■□□□ 1.98
USF3-203ENST00000491165 PODXL2Q9NZ53 605 aa27.41■■□□□ 1.98
USF3-203ENST00000491165 TBC1D16Q8TBP0 767 aa27.39■■□□□ 1.98
USF3-203ENST00000491165 ECHDC1Q9NTX5 307 aa27.39■■□□□ 1.98
USF3-203ENST00000491165 NDUFB9Q9Y6M9 179 aa27.39■■□□□ 1.98
USF3-203ENST00000491165 UFL1O94874 794 aa27.38■■□□□ 1.97
USF3-203ENST00000491165 SLC5A1P13866 664 aa27.38■■□□□ 1.97
USF3-203ENST00000491165 SYT17Q9BSW7 474 aa27.38■■□□□ 1.97
USF3-203ENST00000491165 PHKA1P46020 1223 aa27.38■■□□□ 1.97
USF3-203ENST00000491165 GYG1P46976 350 aa27.38■■□□□ 1.97
USF3-203ENST00000491165 KCNJ4P48050 445 aa27.38■■□□□ 1.97
USF3-203ENST00000491165 BCAMP50895 628 aa27.38■■□□□ 1.97
USF3-203ENST00000491165 AKAP11Q9UKA4 1901 aa27.38■■□□□ 1.97
USF3-203ENST00000491165 TTC41PQ6P2S7 1318 aa27.37■■□□□ 1.97
USF3-203ENST00000491165 REC8O95072 547 aa27.37■■□□□ 1.97
USF3-203ENST00000491165 IFIT1P09914 478 aaKnown RBP27.37■■□□□ 1.97
USF3-203ENST00000491165 SCARF1Q14162 830 aa27.37■■□□□ 1.97
USF3-203ENST00000491165 CCDC102BQ68D86 513 aa27.37■■□□□ 1.97
USF3-203ENST00000491165 MPNDQ8N594 471 aa27.37■■□□□ 1.97
USF3-203ENST00000491165 GGA1Q9UJY5 639 aa27.37■■□□□ 1.97
USF3-203ENST00000491165 LEMD3Q9Y2U8 911 aa27.37■■□□□ 1.97
USF3-203ENST00000491165 DALRD3Q5D0E6 543 aaKnown RBP27.36■■□□□ 1.97
USF3-203ENST00000491165 DPP8Q6V1X1 898 aaPredicted RBP27.35■■□□□ 1.97
USF3-203ENST00000491165 FAM84BQ96KN1 310 aaPredicted RBP27.35■■□□□ 1.97
USF3-203ENST00000491165 MAP4K4O95819 1239 aaPredicted RBP27.35■■□□□ 1.97
USF3-203ENST00000491165 PI16Q6UXB8 463 aa27.35■■□□□ 1.97
USF3-203ENST00000491165 BOLA2Q9H3K6 86 aa27.35■■□□□ 1.97
USF3-203ENST00000491165 BAG4O95429 457 aaKnown RBP27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms