RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 TRAF5O00463 557 aa24.87■■□□□ 1.57
SMC4-222ENST00000490207 TAF5LO75529 589 aa24.87■■□□□ 1.57
SMC4-222ENST00000490207 FMR1Q06787 632 aaKnown RBP eCLIP24.87■■□□□ 1.576e-9■□□□□ 8.8
SMC4-222ENST00000490207 LDHAL6AQ6ZMR3 332 aa24.87■■□□□ 1.57
SMC4-222ENST00000490207 HELBQ8NG08 1087 aaPredicted RBP24.87■■□□□ 1.57
SMC4-222ENST00000490207 NOB1Q9ULX3 412 aaKnown RBP24.87■■□□□ 1.57
SMC4-222ENST00000490207 EGFRP00533 1210 aa24.86■■□□□ 1.57
SMC4-222ENST00000490207 RARSP54136 660 aaKnown RBP24.86■■□□□ 1.57
SMC4-222ENST00000490207 KIF4BQ2VIQ3 1234 aa24.86■■□□□ 1.57
SMC4-222ENST00000490207 RABL6Q3YEC7 729 aaPredicted RBP24.86■■□□□ 1.57
SMC4-222ENST00000490207 FBXW7Q969H0 707 aa24.86■■□□□ 1.57
SMC4-222ENST00000490207 GLIS2Q9BZE0 524 aaPredicted RBP24.86■■□□□ 1.57
SMC4-222ENST00000490207 KIF16BQ96L93 1317 aa24.86■■□□□ 1.57
SMC4-222ENST00000490207 RBM26Q5T8P6 1007 aaKnown RBP24.85■■□□□ 1.57
SMC4-222ENST00000490207 ANKRD44Q8N8A2 993 aa24.85■■□□□ 1.57
SMC4-222ENST00000490207 API5Q9BZZ5 524 aaKnown RBP24.85■■□□□ 1.57
SMC4-222ENST00000490207 USP44Q9H0E7 712 aa24.85■■□□□ 1.57
SMC4-222ENST00000490207 SNAP23O00161 211 aa24.84■■□□□ 1.57
SMC4-222ENST00000490207 IRS2Q9Y4H2 1338 aa24.84■■□□□ 1.57
SMC4-222ENST00000490207 POLR2AP24928 1970 aaKnown RBP24.84■■□□□ 1.57
SMC4-222ENST00000490207 GMLQ99445 158 aa24.83■■□□□ 1.57
SMC4-222ENST00000490207 ABT1Q9ULW3 272 aaKnown RBP24.83■■□□□ 1.57
SMC4-222ENST00000490207 MYO3BQ8WXR4 1341 aa24.83■■□□□ 1.56
SMC4-222ENST00000490207 PLIN1O60240 522 aa24.82■■□□□ 1.56
SMC4-222ENST00000490207 ZNF280AP59817 542 aaPredicted RBP24.82■■□□□ 1.56
SMC4-222ENST00000490207 DACT2Q5SW24 774 aa24.82■■□□□ 1.56
SMC4-222ENST00000490207 STRIP1Q5VSL9 837 aa24.82■■□□□ 1.56
SMC4-222ENST00000490207 C15orf52Q6ZUT6 534 aaKnown RBP24.82■■□□□ 1.56
SMC4-222ENST00000490207 CDC37L1Q7L3B6 337 aa24.82■■□□□ 1.56
SMC4-222ENST00000490207 RASSF10A6NK89 507 aa24.81■■□□□ 1.56
SMC4-222ENST00000490207 USP17L8P0C7I0 530 aa24.81■■□□□ 1.56
SMC4-222ENST00000490207 ZNF804AQ7Z570 1209 aa24.8■■□□□ 1.56
SMC4-222ENST00000490207 MXD3Q9BW11 206 aa24.8■■□□□ 1.56
SMC4-222ENST00000490207 PUS3Q9BZE2 481 aaKnown RBP24.8■■□□□ 1.56
SMC4-222ENST00000490207 CD209Q9NNX6 404 aa24.8■■□□□ 1.56
SMC4-222ENST00000490207 CELF2O95319 508 aaKnown RBP24.79■■□□□ 1.56
SMC4-222ENST00000490207 CST9Q5W186 159 aa24.79■■□□□ 1.56
SMC4-222ENST00000490207 USP48Q86UV5 1035 aa24.79■■□□□ 1.56
SMC4-222ENST00000490207 DCPSQ96C86 337 aaKnown RBP24.79■■□□□ 1.56
SMC4-222ENST00000490207 MYOZ2Q9NPC6 264 aa24.79■■□□□ 1.56
SMC4-222ENST00000490207 GGA3Q9NZ52 723 aa24.79■■□□□ 1.56
SMC4-222ENST00000490207 THSD7BQ9C0I4 1608 aa24.79■■□□□ 1.56
SMC4-222ENST00000490207 UBTFL1P0CB47 393 aaPredicted RBP24.78■■□□□ 1.56
SMC4-222ENST00000490207 VEGFBP49765 207 aa24.78■■□□□ 1.56
SMC4-222ENST00000490207 DEFB115Q30KQ5 88 aa24.78■■□□□ 1.56
SMC4-222ENST00000490207 TTLL5Q6EMB2 1281 aa24.78■■□□□ 1.56
SMC4-222ENST00000490207 ZNF408Q9H9D4 720 aa24.78■■□□□ 1.56
SMC4-222ENST00000490207 MROH5Q6ZUA9 1318 aa24.78■■□□□ 1.56
SMC4-222ENST00000490207 ARAP2Q8WZ64 1704 aa24.78■■□□□ 1.56
SMC4-222ENST00000490207 PCNTO95613 3336 aa24.77■■□□□ 1.56
SMC4-222ENST00000490207 GTF2IP78347 998 aa24.77■■□□□ 1.56
SMC4-222ENST00000490207 KRT26Q7Z3Y9 468 aa24.77■■□□□ 1.56
SMC4-222ENST00000490207 ARHGAP45Q92619 1136 aa24.77■■□□□ 1.56
SMC4-222ENST00000490207 RIPOR2Q9Y4F9 1068 aa24.77■■□□□ 1.56
SMC4-222ENST00000490207 HSPA1AP0DMV8 641 aaKnown RBP24.76■■□□□ 1.55
SMC4-222ENST00000490207 HSPA1BP0DMV9 641 aaKnown RBP24.76■■□□□ 1.55
SMC4-222ENST00000490207 UBE4AQ14139 1066 aa24.76■■□□□ 1.55
SMC4-222ENST00000490207 LRRC24Q50LG9 513 aa24.76■■□□□ 1.55
SMC4-222ENST00000490207 TLL2Q9Y6L7 1015 aa24.76■■□□□ 1.55
SMC4-222ENST00000490207 ASTN2O75129 1339 aaPredicted RBP24.76■■□□□ 1.55
SMC4-222ENST00000490207 ADM5C9JUS6 153 aa24.75■■□□□ 1.55
SMC4-222ENST00000490207 IL1R1P14778 569 aa24.75■■□□□ 1.55
SMC4-222ENST00000490207 SCARF1Q14162 830 aa24.75■■□□□ 1.55
SMC4-222ENST00000490207 OGFOD1Q8N543 542 aa24.75■■□□□ 1.55
SMC4-222ENST00000490207 KLHDC4Q8TBB5 520 aa24.75■■□□□ 1.55
SMC4-222ENST00000490207 ZBED9Q6R2W3 1325 aa24.75■■□□□ 1.55
SMC4-222ENST00000490207 METTL24Q5JXM2 366 aa24.74■■□□□ 1.55
SMC4-222ENST00000490207 PAXIP1Q6ZW49 1069 aaPredicted RBP24.74■■□□□ 1.55
SMC4-222ENST00000490207 SULF1Q8IWU6 871 aa24.74■■□□□ 1.55
SMC4-222ENST00000490207 ECM29Q5VYK3 1845 aa24.73■■□□□ 1.55
SMC4-222ENST00000490207 IPO8O15397 1037 aaKnown RBP24.73■■□□□ 1.55
SMC4-222ENST00000490207 BCAR3O75815 825 aa24.73■■□□□ 1.55
SMC4-222ENST00000490207 ANGEL2Q5VTE6 544 aaKnown RBP24.73■■□□□ 1.55
SMC4-222ENST00000490207 DLK2Q6UY11 383 aa24.73■■□□□ 1.55
SMC4-222ENST00000490207 KIAA0825Q8IV33 1275 aa24.73■■□□□ 1.55
SMC4-222ENST00000490207 PITPNM2Q9BZ72 1349 aa24.72■■□□□ 1.55
SMC4-222ENST00000490207 WDR33Q9C0J8 1336 aaKnown RBP24.72■■□□□ 1.55
SMC4-222ENST00000490207 RFX5P48382 616 aaPredicted RBP24.72■■□□□ 1.55
SMC4-222ENST00000490207 MMP14P50281 582 aa24.72■■□□□ 1.55
SMC4-222ENST00000490207 INTS3Q68E01 1043 aaKnown RBP24.72■■□□□ 1.55
SMC4-222ENST00000490207 FRAT1Q92837 279 aaPredicted RBP24.72■■□□□ 1.55
SMC4-222ENST00000490207 MEIS3Q99687 375 aa24.72■■□□□ 1.55
SMC4-222ENST00000490207 HDAC9Q9UKV0 1011 aa24.72■■□□□ 1.55
SMC4-222ENST00000490207 HDAC5Q9UQL6 1122 aa24.72■■□□□ 1.55
SMC4-222ENST00000490207 LRRFIP2Q9Y608 721 aaKnown RBP24.72■■□□□ 1.55
SMC4-222ENST00000490207 TRIM27P14373 513 aa24.71■■□□□ 1.55
SMC4-222ENST00000490207 ATF7IPQ6VMQ6 1270 aa24.71■■□□□ 1.55
SMC4-222ENST00000490207 SAPCD2Q86UD0 394 aa24.71■■□□□ 1.55
SMC4-222ENST00000490207 VGLL2Q8N8G2 317 aa24.71■■□□□ 1.55
SMC4-222ENST00000490207 ECE1P42892 770 aa24.7■■□□□ 1.54
SMC4-222ENST00000490207 GYG1P46976 350 aa24.7■■□□□ 1.54
SMC4-222ENST00000490207 CERS5Q8N5B7 392 aa24.7■■□□□ 1.54
SMC4-222ENST00000490207 CAPNS2Q96L46 248 aa24.7■■□□□ 1.54
SMC4-222ENST00000490207 MYH13Q9UKX3 1938 aa24.7■■□□□ 1.54
SMC4-222ENST00000490207 EYA2O00167 538 aa24.69■■□□□ 1.54
SMC4-222ENST00000490207 HIBADHP31937 336 aaKnown RBP24.69■■□□□ 1.54
SMC4-222ENST00000490207 PTPN12Q05209 780 aaKnown RBP24.69■■□□□ 1.54
SMC4-222ENST00000490207 NBPF9Q3BBW0 867 aa24.69■■□□□ 1.54
SMC4-222ENST00000490207 CYP4F22Q6NT55 531 aa24.69■■□□□ 1.54
SMC4-222ENST00000490207 TNNQ9UQP3 1299 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms