RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 STRIP1Q5VSL9 837 aa17.49■□□□□ 0.39
SCAF4-206ENST00000485790 ANGEL2Q5VTE6 544 aaKnown RBP17.49■□□□□ 0.39
SCAF4-206ENST00000485790 FAM9BQ8IZU0 186 aa17.49■□□□□ 0.39
SCAF4-206ENST00000485790 FBXW7Q969H0 707 aa17.49■□□□□ 0.39
SCAF4-206ENST00000485790 GMLQ99445 158 aa17.49■□□□□ 0.39
SCAF4-206ENST00000485790 GGA3Q9NZ52 723 aa17.49■□□□□ 0.39
SCAF4-206ENST00000485790 ZNF804BA4D1E1 1349 aa17.48■□□□□ 0.39
SCAF4-206ENST00000485790 MYO3BQ8WXR4 1341 aa17.48■□□□□ 0.39
SCAF4-206ENST00000485790 FKBP1BP68106 108 aa17.48■□□□□ 0.39
SCAF4-206ENST00000485790 IFIT5Q13325 482 aaKnown RBP17.48■□□□□ 0.39
SCAF4-206ENST00000485790 TTLL5Q6EMB2 1281 aa17.48■□□□□ 0.39
SCAF4-206ENST00000485790 DLK2Q6UY11 383 aa17.48■□□□□ 0.39
SCAF4-206ENST00000485790 MED23Q9ULK4 1368 aa17.48■□□□□ 0.39
SCAF4-206ENST00000485790 REM2Q8IYK8 340 aaPredicted RBP17.47■□□□□ 0.39
SCAF4-206ENST00000485790 HDAC9Q9UKV0 1011 aa17.47■□□□□ 0.39
SCAF4-206ENST00000485790 DUOX1Q9NRD9 1551 aa17.47■□□□□ 0.39
SCAF4-206ENST00000485790 DACT2Q5SW24 774 aa17.46■□□□□ 0.39
SCAF4-206ENST00000485790 CDCA5Q96FF9 252 aa17.46■□□□□ 0.39
SCAF4-206ENST00000485790 ABHD8Q96I13 439 aa17.46■□□□□ 0.39
SCAF4-206ENST00000485790 C9orf78Q9NZ63 289 aaPredicted RBP17.46■□□□□ 0.39
SCAF4-206ENST00000485790 CHMP3Q9Y3E7 222 aa17.46■□□□□ 0.39
SCAF4-206ENST00000485790 PITPNM2Q9BZ72 1349 aa17.46■□□□□ 0.38
SCAF4-206ENST00000485790 WTIPA6NIX2 430 aaPredicted RBP17.45■□□□□ 0.38
SCAF4-206ENST00000485790 NF2P35240 595 aa17.45■□□□□ 0.38
SCAF4-206ENST00000485790 CASP7P55210 303 aa17.45■□□□□ 0.38
SCAF4-206ENST00000485790 CCDC57Q2TAC2 916 aa17.45■□□□□ 0.38
SCAF4-206ENST00000485790 FAM161AQ3B820 660 aa17.45■□□□□ 0.38
SCAF4-206ENST00000485790 TAF7LQ5H9L4 462 aa17.45■□□□□ 0.38
SCAF4-206ENST00000485790 TSKSQ9UJT2 592 aa17.45■□□□□ 0.38
SCAF4-206ENST00000485790 LAMB2P55268 1798 aa17.45■□□□□ 0.38
SCAF4-206ENST00000485790 DDX60Q8IY21 1712 aaKnown RBP17.44■□□□□ 0.38
SCAF4-206ENST00000485790 KIF23Q02241 960 aaPredicted RBP17.44■□□□□ 0.38
SCAF4-206ENST00000485790 CHRNDQ07001 517 aa17.44■□□□□ 0.38
SCAF4-206ENST00000485790 BEND3Q5T5X7 828 aa17.44■□□□□ 0.38
SCAF4-206ENST00000485790 ASTN2O75129 1339 aaPredicted RBP17.43■□□□□ 0.38
SCAF4-206ENST00000485790 LRRC37AA6NMS7 1700 aa17.42■□□□□ 0.38
SCAF4-206ENST00000485790 ZNF609O15014 1411 aa17.42■□□□□ 0.38
SCAF4-206ENST00000485790 F6X3S4 739 aa17.42■□□□□ 0.38
SCAF4-206ENST00000485790 ALDH1L1O75891 902 aa17.42■□□□□ 0.38
SCAF4-206ENST00000485790 GTF2IP78347 998 aa17.42■□□□□ 0.38
SCAF4-206ENST00000485790 FOXO4P98177 505 aa17.42■□□□□ 0.38
SCAF4-206ENST00000485790 TTLL12Q14166 644 aaPredicted RBP17.42■□□□□ 0.38
SCAF4-206ENST00000485790 NBPF9Q3BBW0 867 aa17.42■□□□□ 0.38
SCAF4-206ENST00000485790 SLC4A10Q6U841 1118 aa17.42■□□□□ 0.38
SCAF4-206ENST00000485790 LMBR1LQ6UX01 489 aa17.42■□□□□ 0.38
SCAF4-206ENST00000485790 LDHAL6AQ6ZMR3 332 aa17.42■□□□□ 0.38
SCAF4-206ENST00000485790 TXNRD3Q86VQ6 643 aa17.42■□□□□ 0.38
SCAF4-206ENST00000485790 SAGE1Q9NXZ1 904 aa17.42■□□□□ 0.38
SCAF4-206ENST00000485790 TAF1P21675 1872 aa17.41■□□□□ 0.38
SCAF4-206ENST00000485790 CCDC85CA6NKD9 419 aa17.41■□□□□ 0.38
SCAF4-206ENST00000485790 FAM155AB1AL88 458 aaPredicted RBP17.41■□□□□ 0.38
SCAF4-206ENST00000485790 GRM8O00222 908 aa17.41■□□□□ 0.38
SCAF4-206ENST00000485790 ZNF804AQ7Z570 1209 aa17.41■□□□□ 0.38
SCAF4-206ENST00000485790 ZIC5Q96T25 663 aa17.41■□□□□ 0.38
SCAF4-206ENST00000485790 MXD3Q9BW11 206 aa17.41■□□□□ 0.38
SCAF4-206ENST00000485790 SRCIN1Q9C0H9 1055 aa17.41■□□□□ 0.38
SCAF4-206ENST00000485790 CD209Q9NNX6 404 aa17.41■□□□□ 0.38
SCAF4-206ENST00000485790 CNNM1Q9NRU3 951 aa17.41■□□□□ 0.38
SCAF4-206ENST00000485790 WNT10BO00744 389 aa17.4■□□□□ 0.38
SCAF4-206ENST00000485790 TAF5LO75529 589 aa17.4■□□□□ 0.38
SCAF4-206ENST00000485790 C15orf52Q6ZUT6 534 aaKnown RBP17.4■□□□□ 0.38
SCAF4-206ENST00000485790 KIAA0825Q8IV33 1275 aa17.4■□□□□ 0.38
SCAF4-206ENST00000485790 HELBQ8NG08 1087 aaPredicted RBP17.4■□□□□ 0.38
SCAF4-206ENST00000485790 SPINK5Q9NQ38 1064 aaPredicted RBP17.4■□□□□ 0.38
SCAF4-206ENST00000485790 PLIN1O60240 522 aa17.39■□□□□ 0.37
SCAF4-206ENST00000485790 TRPA1O75762 1119 aa17.39■□□□□ 0.37
SCAF4-206ENST00000485790 SLC10A3P09131 477 aa17.39■□□□□ 0.37
SCAF4-206ENST00000485790 DLGAP5Q15398 846 aa17.39■□□□□ 0.37
SCAF4-206ENST00000485790 CSRNP1Q96S65 589 aa17.39■□□□□ 0.37
SCAF4-206ENST00000485790 RNF186Q9NXI6 227 aa17.39■□□□□ 0.37
SCAF4-206ENST00000485790 UBE2Q2LH0YL09 131 aa17.38■□□□□ 0.37
SCAF4-206ENST00000485790 MYO1BO43795 1136 aa17.38■□□□□ 0.37
SCAF4-206ENST00000485790 APOBEC3FQ8IUX4 373 aaKnown RBP17.38■□□□□ 0.37
SCAF4-206ENST00000485790 COL4A1P02462 1669 aa17.37■□□□□ 0.37
SCAF4-206ENST00000485790 DGKZQ13574 1117 aa17.37■□□□□ 0.37
SCAF4-206ENST00000485790 PRAMEF18Q5VWM3 479 aa17.37■□□□□ 0.37
SCAF4-206ENST00000485790 ARMC9Q7Z3E5 817 aa17.37■□□□□ 0.37
SCAF4-206ENST00000485790 SASH1O94885 1247 aa17.36■□□□□ 0.37
SCAF4-206ENST00000485790 IL1R1P14778 569 aa17.36■□□□□ 0.37
SCAF4-206ENST00000485790 KLRK1P26718 216 aa17.36■□□□□ 0.37
SCAF4-206ENST00000485790 MCOLN1Q9GZU1 580 aa17.36■□□□□ 0.37
SCAF4-206ENST00000485790 FKBP1AP62942 108 aaKnown RBP17.35■□□□□ 0.37
SCAF4-206ENST00000485790 SCAF8Q9UPN6 1271 aaKnown RBP17.35■□□□□ 0.37
SCAF4-206ENST00000485790 TRPM7Q96QT4 1865 aa17.35■□□□□ 0.37
SCAF4-206ENST00000485790 E9PSI1 815 aa17.34■□□□□ 0.37
SCAF4-206ENST00000485790 UBE4AQ14139 1066 aa17.34■□□□□ 0.37
SCAF4-206ENST00000485790 SUPT20HL1Q3ZLR7 823 aa17.34■□□□□ 0.37
SCAF4-206ENST00000485790 EPHA10Q5JZY3 1008 aa17.34■□□□□ 0.37
SCAF4-206ENST00000485790 RASAL3Q86YV0 1011 aa17.34■□□□□ 0.37
SCAF4-206ENST00000485790 MTMR14Q8NCE2 650 aa17.34■□□□□ 0.37
SCAF4-206ENST00000485790 ZNF594Q96JF6 807 aaPredicted RBP17.34■□□□□ 0.37
SCAF4-206ENST00000485790 DEFB129Q9H1M3 183 aa17.34■□□□□ 0.37
SCAF4-206ENST00000485790 SNAP23O00161 211 aa17.33■□□□□ 0.36
SCAF4-206ENST00000485790 PPP1R12BO60237 982 aaPredicted RBP17.33■□□□□ 0.36
SCAF4-206ENST00000485790 HIBADHP31937 336 aaKnown RBP17.33■□□□□ 0.36
SCAF4-206ENST00000485790 RBM5P52756 815 aaKnown RBP eCLIP17.33■□□□□ 0.36
SCAF4-206ENST00000485790 MOB2Q70IA6 237 aa17.33■□□□□ 0.36
SCAF4-206ENST00000485790 F8W031 263 aaPredicted RBP17.32■□□□□ 0.36
SCAF4-206ENST00000485790 VPS37DQ86XT2 251 aa17.32■□□□□ 0.36
SCAF4-206ENST00000485790 SLC10A4Q96EP9 437 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms