RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, human

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP50-215	ENST00000484186	FOXO4	P98177	505 aa		11.98	□□□□□ -0.49
NUP50-215	ENST00000484186	COA1	Q9GZY4	146 aa		11.98	□□□□□ -0.49
NUP50-215	ENST00000484186	ADM5	C9JUS6	153 aa		11.97	□□□□□ -0.49
NUP50-215	ENST00000484186	AOC2	O75106	756 aa		11.97	□□□□□ -0.49
NUP50-215	ENST00000484186	LBX1	P52954	281 aa		11.97	□□□□□ -0.49
NUP50-215	ENST00000484186	CHRND	Q07001	517 aa		11.97	□□□□□ -0.49
NUP50-215	ENST00000484186	IFIT5	Q13325	482 aa	Known RBP	11.97	□□□□□ -0.49
NUP50-215	ENST00000484186	SCARF1	Q14162	830 aa		11.97	□□□□□ -0.49
NUP50-215	ENST00000484186	TXNRD3	Q86VQ6	643 aa		11.97	□□□□□ -0.49
NUP50-215	ENST00000484186	SULF1	Q8IWU6	871 aa		11.97	□□□□□ -0.49
NUP50-215	ENST00000484186	BEGAIN	Q9BUH8	593 aa		11.97	□□□□□ -0.49
NUP50-215	ENST00000484186	MYOZ2	Q9NPC6	264 aa		11.97	□□□□□ -0.49
NUP50-215	ENST00000484186	GRM8	O00222	908 aa		11.96	□□□□□ -0.49
NUP50-215	ENST00000484186	ALDH1L1	O75891	902 aa		11.96	□□□□□ -0.49
NUP50-215	ENST00000484186	HSPA8	P11142	646 aa	Known RBP	11.96	□□□□□ -0.49
NUP50-215	ENST00000484186	HUNK	P57058	714 aa		11.96	□□□□□ -0.49
NUP50-215	ENST00000484186	STRIP1	Q5VSL9	837 aa		11.96	□□□□□ -0.49
NUP50-215	ENST00000484186	SLC4A10	Q6U841	1118 aa		11.96	□□□□□ -0.49
NUP50-215	ENST00000484186	LMBR1L	Q6UX01	489 aa		11.96	□□□□□ -0.49
NUP50-215	ENST00000484186	C2orf69	Q8N8R5	385 aa		11.96	□□□□□ -0.49
NUP50-215	ENST00000484186	SRCIN1	Q9C0H9	1055 aa		11.96	□□□□□ -0.49
NUP50-215	ENST00000484186	GBA2	Q9HCG7	927 aa	Predicted RBP	11.96	□□□□□ -0.49
NUP50-215	ENST00000484186	GGA3	Q9NZ52	723 aa		11.96	□□□□□ -0.49
NUP50-215	ENST00000484186	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.96	□□□□□ -0.49
NUP50-215	ENST00000484186	CHMP3	Q9Y3E7	222 aa		11.96	□□□□□ -0.49
NUP50-215	ENST00000484186	ASTN2	O75129	1339 aa	Predicted RBP	11.95	□□□□□ -0.5
NUP50-215	ENST00000484186	MYO3B	Q8WXR4	1341 aa		11.95	□□□□□ -0.5
NUP50-215	ENST00000484186	CAPN15	O75808	1086 aa		11.95	□□□□□ -0.5
NUP50-215	ENST00000484186	KCNJ4	P48050	445 aa		11.95	□□□□□ -0.5
NUP50-215	ENST00000484186	EPHA10	Q5JZY3	1008 aa		11.95	□□□□□ -0.5
NUP50-215	ENST00000484186	DACT2	Q5SW24	774 aa		11.95	□□□□□ -0.5
NUP50-215	ENST00000484186	ANGEL2	Q5VTE6	544 aa	Known RBP	11.95	□□□□□ -0.5
NUP50-215	ENST00000484186	TTLL5	Q6EMB2	1281 aa		11.95	□□□□□ -0.5
NUP50-215	ENST00000484186	FBXW7	Q969H0	707 aa		11.95	□□□□□ -0.5
NUP50-215	ENST00000484186	MXD3	Q9BW11	206 aa		11.95	□□□□□ -0.5
NUP50-215	ENST00000484186	POLR2A	P24928	1970 aa	Known RBP	11.95	□□□□□ -0.5
NUP50-215	ENST00000484186	SPEF2	Q9C093	1822 aa		11.95	□□□□□ -0.5
NUP50-215	ENST00000484186		E9PSI1	815 aa		11.94	□□□□□ -0.5
NUP50-215	ENST00000484186	TAF5L	O75529	589 aa		11.94	□□□□□ -0.5
NUP50-215	ENST00000484186	KLRK1	P26718	216 aa		11.94	□□□□□ -0.5
NUP50-215	ENST00000484186	MMP14	P50281	582 aa		11.94	□□□□□ -0.5
NUP50-215	ENST00000484186	CCDC57	Q2TAC2	916 aa		11.94	□□□□□ -0.5
NUP50-215	ENST00000484186	OGFOD1	Q8N543	542 aa		11.94	□□□□□ -0.5
NUP50-215	ENST00000484186	MRPL50	Q8N5N7	158 aa	Known RBP	11.94	□□□□□ -0.5
NUP50-215	ENST00000484186	HELB	Q8NG08	1087 aa	Predicted RBP	11.94	□□□□□ -0.5
NUP50-215	ENST00000484186	PSME4	Q14997	1843 aa		11.94	□□□□□ -0.5
NUP50-215	ENST00000484186	THSD7B	Q9C0I4	1608 aa		11.93	□□□□□ -0.5
NUP50-215	ENST00000484186	PITPNM2	Q9BZ72	1349 aa		11.93	□□□□□ -0.5
NUP50-215	ENST00000484186	SNAP23	O00161	211 aa		11.93	□□□□□ -0.5
NUP50-215	ENST00000484186	BRPF1	P55201	1214 aa	Predicted RBP	11.93	□□□□□ -0.5
NUP50-215	ENST00000484186	GTF2I	P78347	998 aa		11.93	□□□□□ -0.5
NUP50-215	ENST00000484186	NOG	Q13253	232 aa		11.93	□□□□□ -0.5
NUP50-215	ENST00000484186	TAF7L	Q5H9L4	462 aa		11.93	□□□□□ -0.5
NUP50-215	ENST00000484186	RGMB	Q6NW40	437 aa		11.93	□□□□□ -0.5
NUP50-215	ENST00000484186	LDHAL6A	Q6ZMR3	332 aa		11.93	□□□□□ -0.5
NUP50-215	ENST00000484186	C15orf52	Q6ZUT6	534 aa	Known RBP	11.93	□□□□□ -0.5
NUP50-215	ENST00000484186	CDCA5	Q96FF9	252 aa		11.93	□□□□□ -0.5
NUP50-215	ENST00000484186	ZNF594	Q96JF6	807 aa	Predicted RBP	11.93	□□□□□ -0.5
NUP50-215	ENST00000484186	CD209	Q9NNX6	404 aa		11.93	□□□□□ -0.5
NUP50-215	ENST00000484186	IRS2	Q9Y4H2	1338 aa		11.92	□□□□□ -0.5
NUP50-215	ENST00000484186	CA12	O43570	354 aa		11.92	□□□□□ -0.5
NUP50-215	ENST00000484186	SLFN5	Q08AF3	891 aa		11.92	□□□□□ -0.5
NUP50-215	ENST00000484186	NBPF9	Q3BBW0	867 aa		11.92	□□□□□ -0.5
NUP50-215	ENST00000484186	CCDC102A	Q96A19	550 aa		11.92	□□□□□ -0.5
NUP50-215	ENST00000484186	SUCLG2	Q96I99	432 aa		11.92	□□□□□ -0.5
NUP50-215	ENST00000484186	CNNM1	Q9NRU3	951 aa		11.92	□□□□□ -0.5
NUP50-215	ENST00000484186	HDAC9	Q9UKV0	1011 aa		11.92	□□□□□ -0.5
NUP50-215	ENST00000484186	UTY	O14607	1347 aa		11.91	□□□□□ -0.5
NUP50-215	ENST00000484186	FAM155A	B1AL88	458 aa	Predicted RBP	11.91	□□□□□ -0.5
NUP50-215	ENST00000484186	WNT10B	O00744	389 aa		11.91	□□□□□ -0.5
NUP50-215	ENST00000484186	PLIN1	O60240	522 aa		11.91	□□□□□ -0.5
NUP50-215	ENST00000484186	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.91	□□□□□ -0.5
NUP50-215	ENST00000484186	ZNF157	P51786	506 aa	Predicted RBP	11.91	□□□□□ -0.5
NUP50-215	ENST00000484186	ZNF804A	Q7Z570	1209 aa		11.91	□□□□□ -0.5
NUP50-215	ENST00000484186	KIAA0825	Q8IV33	1275 aa		11.91	□□□□□ -0.5
NUP50-215	ENST00000484186	SSH1	Q8WYL5	1049 aa		11.91	□□□□□ -0.5
NUP50-215	ENST00000484186	ZIC5	Q96T25	663 aa		11.91	□□□□□ -0.5
NUP50-215	ENST00000484186	TSKS	Q9UJT2	592 aa		11.91	□□□□□ -0.5
NUP50-215	ENST00000484186	PTPRC	P08575	1304 aa		11.9	□□□□□ -0.5
NUP50-215	ENST00000484186	IL1R1	P14778	569 aa		11.9	□□□□□ -0.5
NUP50-215	ENST00000484186	FKBP1B	P68106	108 aa		11.9	□□□□□ -0.5
NUP50-215	ENST00000484186	KAZALD1	Q96I82	304 aa		11.9	□□□□□ -0.5
NUP50-215	ENST00000484186	SCAF8	Q9UPN6	1271 aa	Known RBP	11.9	□□□□□ -0.5
NUP50-215	ENST00000484186	KIF23	Q02241	960 aa	Predicted RBP	11.89	□□□□□ -0.51
NUP50-215	ENST00000484186	UBE4A	Q14139	1066 aa		11.89	□□□□□ -0.51
NUP50-215	ENST00000484186	ALDH1L2	Q3SY69	923 aa		11.89	□□□□□ -0.51
NUP50-215	ENST00000484186	PRAMEF18	Q5VWM3	479 aa		11.89	□□□□□ -0.51
NUP50-215	ENST00000484186	CDCA7L	Q96GN5	454 aa		11.89	□□□□□ -0.51
NUP50-215	ENST00000484186	ZBED3	Q96IU2	234 aa	Predicted RBP	11.89	□□□□□ -0.51
NUP50-215	ENST00000484186	PUS3	Q9BZE2	481 aa	Known RBP	11.89	□□□□□ -0.51
NUP50-215	ENST00000484186	SASH1	O94885	1247 aa		11.88	□□□□□ -0.51
NUP50-215	ENST00000484186	SLC10A3	P09131	477 aa		11.88	□□□□□ -0.51
NUP50-215	ENST00000484186	FKBP1A	P62942	108 aa	Known RBP	11.88	□□□□□ -0.51
NUP50-215	ENST00000484186	RABL6	Q3YEC7	729 aa	Predicted RBP	11.88	□□□□□ -0.51
NUP50-215	ENST00000484186	TRMT2A	Q8IZ69	625 aa	Known RBP	11.88	□□□□□ -0.51
NUP50-215	ENST00000484186	CERS5	Q8N5B7	392 aa		11.88	□□□□□ -0.51
NUP50-215	ENST00000484186	BICC1	Q9H694	974 aa	Known RBP	11.88	□□□□□ -0.51
NUP50-215	ENST00000484186	RIPOR2	Q9Y4F9	1068 aa		11.88	□□□□□ -0.51
NUP50-215	ENST00000484186	ZNF646	O15015	1829 aa	Predicted RBP	11.88	□□□□□ -0.51
NUP50-215	ENST00000484186	CCER2	I3L3R5	266 aa		11.87	□□□□□ -0.51

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