RNA–Protein interactions for RNA: ENST00000481168.1

RPN1-204, Transcript of ribophorin I, humanhuman

TSL 2

Gene RPN1, Length 751 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-204ENST00000481168 RPS8P62241 208 aaKnown RBP16.76■□□□□ 0.27
RPN1-204ENST00000481168 SF3B3Q15393 1217 aaKnown RBP16.76■□□□□ 0.27
RPN1-204ENST00000481168 LRP10Q7Z4F1 713 aa16.76■□□□□ 0.27
RPN1-204ENST00000481168 OGFOD1Q8N543 542 aa16.76■□□□□ 0.27
RPN1-204ENST00000481168 CLMNQ96JQ2 1002 aa16.76■□□□□ 0.27
RPN1-204ENST00000481168 NUDCQ9Y266 331 aa16.76■□□□□ 0.27
RPN1-204ENST00000481168 SASH1O94885 1247 aa16.75■□□□□ 0.27
RPN1-204ENST00000481168 PDIA6Q15084 440 aa16.75■□□□□ 0.27
RPN1-204ENST00000481168 PROSER3Q2NL68 480 aa16.75■□□□□ 0.27
RPN1-204ENST00000481168 SH3TC2Q8TF17 1288 aa16.75■□□□□ 0.27
RPN1-204ENST00000481168 CFAP53Q96M91 514 aa16.75■□□□□ 0.27
RPN1-204ENST00000481168 COL25A1Q9BXS0 654 aaPredicted RBP16.75■□□□□ 0.27
RPN1-204ENST00000481168 PODXL2Q9NZ53 605 aa16.75■□□□□ 0.27
RPN1-204ENST00000481168 COPS6Q7L5N1 327 aa16.74■□□□□ 0.27
RPN1-204ENST00000481168 FAM89AQ96GI7 184 aa16.74■□□□□ 0.27
RPN1-204ENST00000481168 NR2E3Q9Y5X4 410 aa16.74■□□□□ 0.27
RPN1-204ENST00000481168 APOBEC3FQ8IUX4 373 aaKnown RBP16.73■□□□□ 0.27
RPN1-204ENST00000481168 HTATIP2Q9BUP3 242 aa16.73■□□□□ 0.27
RPN1-204ENST00000481168 MXD3Q9BW11 206 aa16.73■□□□□ 0.27
RPN1-204ENST00000481168 PODNQ7Z5L7 613 aa16.72■□□□□ 0.27
RPN1-204ENST00000481168 XAGE3Q8WTP9 111 aa16.72■□□□□ 0.27
RPN1-204ENST00000481168 FBXW7Q969H0 707 aa16.72■□□□□ 0.27
RPN1-204ENST00000481168 PTPN18Q99952 460 aa16.72■□□□□ 0.27
RPN1-204ENST00000481168 A0A1W2PPC1 479 aa16.71■□□□□ 0.27
RPN1-204ENST00000481168 PPP1R12BO60237 982 aaPredicted RBP16.71■□□□□ 0.27
RPN1-204ENST00000481168 RTL5Q5HYW3 569 aaPredicted RBP16.71■□□□□ 0.27
RPN1-204ENST00000481168 UNC80Q8N2C7 3258 aa16.7■□□□□ 0.26
RPN1-204ENST00000481168 ZBTB7BO15156 539 aaPredicted RBP16.7■□□□□ 0.26
RPN1-204ENST00000481168 MAP3K11Q16584 847 aa16.7■□□□□ 0.26
RPN1-204ENST00000481168 SHISA4Q96DD7 197 aa16.7■□□□□ 0.26
RPN1-204ENST00000481168 COL4A1P02462 1669 aa16.69■□□□□ 0.26
RPN1-204ENST00000481168 GJA5P36382 358 aa16.69■□□□□ 0.26
RPN1-204ENST00000481168 ANKRD13DQ6ZTN6 518 aa16.69■□□□□ 0.26
RPN1-204ENST00000481168 DEFB123Q8N688 67 aa16.69■□□□□ 0.26
RPN1-204ENST00000481168 DEFB129Q9H1M3 183 aa16.69■□□□□ 0.26
RPN1-204ENST00000481168 SEC31BQ9NQW1 1179 aa16.69■□□□□ 0.26
RPN1-204ENST00000481168 TAF1CQ15572 869 aaPredicted RBP16.68■□□□□ 0.26
RPN1-204ENST00000481168 DACT2Q5SW24 774 aa16.68■□□□□ 0.26
RPN1-204ENST00000481168 ZFYVE28Q9HCC9 887 aa16.68■□□□□ 0.26
RPN1-204ENST00000481168 STXBP5LQ9Y2K9 1186 aa16.68■□□□□ 0.26
RPN1-204ENST00000481168 KDM3BQ7LBC6 1761 aa16.67■□□□□ 0.26
RPN1-204ENST00000481168 TESPA1A2RU30 521 aaPredicted RBP16.67■□□□□ 0.26
RPN1-204ENST00000481168 IRS4O14654 1257 aaPredicted RBP16.67■□□□□ 0.26
RPN1-204ENST00000481168 MTFR1Q15390 333 aa16.67■□□□□ 0.26
RPN1-204ENST00000481168 NKX2-3Q8TAU0 364 aa16.67■□□□□ 0.26
RPN1-204ENST00000481168 STAP2Q9UGK3 403 aa16.67■□□□□ 0.26
RPN1-204ENST00000481168 ATP5J2-PTCD1G3V325 749 aa16.66■□□□□ 0.26
RPN1-204ENST00000481168 ATP2B4P23634 1241 aa16.66■□□□□ 0.26
RPN1-204ENST00000481168 IREB2P48200 963 aaKnown RBP16.66■□□□□ 0.26
RPN1-204ENST00000481168 KIF22Q14807 665 aa16.66■□□□□ 0.26
RPN1-204ENST00000481168 XDHP47989 1333 aa16.66■□□□□ 0.26
RPN1-204ENST00000481168 MYO3BQ8WXR4 1341 aa16.66■□□□□ 0.26
RPN1-204ENST00000481168 UNCXA6NJT0 531 aa16.65■□□□□ 0.26
RPN1-204ENST00000481168 NEFMP07197 916 aa16.65■□□□□ 0.26
RPN1-204ENST00000481168 SUPT20HL1Q3ZLR7 823 aa16.65■□□□□ 0.26
RPN1-204ENST00000481168 Q7L0L9 218 aa16.65■□□□□ 0.26
RPN1-204ENST00000481168 ARHGAP39Q9C0H5 1083 aa16.65■□□□□ 0.26
RPN1-204ENST00000481168 TSPYL4Q9UJ04 414 aa16.65■□□□□ 0.26
RPN1-204ENST00000481168 MMP14P50281 582 aa16.64■□□□□ 0.25
RPN1-204ENST00000481168 STRIP1Q5VSL9 837 aa16.64■□□□□ 0.25
RPN1-204ENST00000481168 UBE2Q1Q7Z7E8 422 aa16.64■□□□□ 0.25
RPN1-204ENST00000481168 KIAA0825Q8IV33 1275 aa16.64■□□□□ 0.25
RPN1-204ENST00000481168 EVI5O60447 810 aa16.63■□□□□ 0.25
RPN1-204ENST00000481168 ECM2O94769 699 aaPredicted RBP16.63■□□□□ 0.25
RPN1-204ENST00000481168 GJA8P48165 433 aa16.63■□□□□ 0.25
RPN1-204ENST00000481168 ANKRD13AQ8IZ07 590 aa16.63■□□□□ 0.25
RPN1-204ENST00000481168 BRI3BPQ8WY22 251 aa16.63■□□□□ 0.25
RPN1-204ENST00000481168 ISCA1Q9BUE6 129 aa16.63■□□□□ 0.25
RPN1-204ENST00000481168 ELP3Q9H9T3 547 aa16.63■□□□□ 0.25
RPN1-204ENST00000481168 PSME4Q14997 1843 aa16.62■□□□□ 0.25
RPN1-204ENST00000481168 USP2O75604 605 aaPredicted RBP16.62■□□□□ 0.25
RPN1-204ENST00000481168 WDHD1O75717 1129 aaPredicted RBP16.62■□□□□ 0.25
RPN1-204ENST00000481168 GPR153Q6NV75 609 aa16.62■□□□□ 0.25
RPN1-204ENST00000481168 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.62■□□□□ 0.25
RPN1-204ENST00000481168 OPTNQ96CV9 577 aa16.62■□□□□ 0.25
RPN1-204ENST00000481168 ZBED3Q96IU2 234 aaPredicted RBP16.62■□□□□ 0.25
RPN1-204ENST00000481168 MS4A4AQ96JQ5 239 aa16.62■□□□□ 0.25
RPN1-204ENST00000481168 SSC5DA1L4H1 1573 aa16.61■□□□□ 0.25
RPN1-204ENST00000481168 CCL15-CCL14A0A0B4J2E2 113 aa16.61■□□□□ 0.25
RPN1-204ENST00000481168 FARP2O94887 1054 aaPredicted RBP16.61■□□□□ 0.25
RPN1-204ENST00000481168 GJB1P08034 283 aa16.61■□□□□ 0.25
RPN1-204ENST00000481168 PRMT2P55345 433 aa16.61■□□□□ 0.25
RPN1-204ENST00000481168 LACTBP83111 547 aaPredicted RBP16.61■□□□□ 0.25
RPN1-204ENST00000481168 DLGAP5Q15398 846 aa16.61■□□□□ 0.25
RPN1-204ENST00000481168 CCL15Q16663 113 aa16.61■□□□□ 0.25
RPN1-204ENST00000481168 NBPF12Q5TAG4 269 aaPredicted RBP16.61■□□□□ 0.25
RPN1-204ENST00000481168 PLBD2Q8NHP8 589 aa16.61■□□□□ 0.25
RPN1-204ENST00000481168 CCDC85AQ96PX6 553 aaPredicted RBP16.61■□□□□ 0.25
RPN1-204ENST00000481168 PPP2R3BQ9Y5P8 575 aa16.61■□□□□ 0.25
RPN1-204ENST00000481168 VCANP13611 3396 aa16.61■□□□□ 0.25
RPN1-204ENST00000481168 COL1A1P02452 1464 aaPredicted RBP16.61■□□□□ 0.25
RPN1-204ENST00000481168 GNRH1P01148 92 aa16.6■□□□□ 0.25
RPN1-204ENST00000481168 CCL5P13501 91 aa16.6■□□□□ 0.25
RPN1-204ENST00000481168 CCDC152Q4G0S7 254 aa16.6■□□□□ 0.25
RPN1-204ENST00000481168 TTLL5Q6EMB2 1281 aa16.6■□□□□ 0.25
RPN1-204ENST00000481168 ANKRD18AQ8IVF6 992 aa16.6■□□□□ 0.25
RPN1-204ENST00000481168 FAM43AQ8N2R8 423 aa16.6■□□□□ 0.25
RPN1-204ENST00000481168 RNF208Q9H0X6 261 aa16.6■□□□□ 0.25
RPN1-204ENST00000481168 MTMR10Q9NXD2 777 aa16.6■□□□□ 0.25
RPN1-204ENST00000481168 BIN2Q9UBW5 565 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms