RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 TRIM27P14373 513 aa11.44□□□□□ -0.58
VCP-206ENST00000480327 RPS12P25398 132 aaKnown RBP11.44□□□□□ -0.58
VCP-206ENST00000480327 RBM26Q5T8P6 1007 aaKnown RBP11.44□□□□□ -0.58
VCP-206ENST00000480327 ZKSCAN2Q63HK3 967 aa11.44□□□□□ -0.58
VCP-206ENST00000480327 KRT26Q7Z3Y9 468 aa11.44□□□□□ -0.58
VCP-206ENST00000480327 ZBTB38Q8NAP3 1195 aaPredicted RBP11.44□□□□□ -0.58
VCP-206ENST00000480327 CCDC191Q8NCU4 936 aa11.44□□□□□ -0.58
VCP-206ENST00000480327 LINS1Q8NG48 757 aa11.44□□□□□ -0.58
VCP-206ENST00000480327 SRCIN1Q9C0H9 1055 aa11.44□□□□□ -0.58
VCP-206ENST00000480327 KIF4BQ2VIQ3 1234 aa11.43□□□□□ -0.58
VCP-206ENST00000480327 ATF7IPQ6VMQ6 1270 aa11.43□□□□□ -0.58
VCP-206ENST00000480327 ARHGAP45Q92619 1136 aa11.43□□□□□ -0.58
VCP-206ENST00000480327 GMLQ99445 158 aa11.43□□□□□ -0.58
VCP-206ENST00000480327 GBA2Q9HCG7 927 aaPredicted RBP11.43□□□□□ -0.58
VCP-206ENST00000480327 PAPPA2Q9BXP8 1791 aa11.43□□□□□ -0.58
VCP-206ENST00000480327 CA12O43570 354 aa11.42□□□□□ -0.58
VCP-206ENST00000480327 UFL1O94874 794 aa11.42□□□□□ -0.58
VCP-206ENST00000480327 PCCAP05165 728 aaPredicted RBP11.42□□□□□ -0.58
VCP-206ENST00000480327 ZNF280AP59817 542 aaPredicted RBP11.42□□□□□ -0.58
VCP-206ENST00000480327 NOGQ13253 232 aa11.42□□□□□ -0.58
VCP-206ENST00000480327 GCKRQ14397 625 aa11.42□□□□□ -0.58
VCP-206ENST00000480327 RGMBQ6NW40 437 aa11.42□□□□□ -0.58
VCP-206ENST00000480327 UBE3BQ7Z3V4 1068 aa11.42□□□□□ -0.58
VCP-206ENST00000480327 CCDC85AQ96PX6 553 aaPredicted RBP11.42□□□□□ -0.58
VCP-206ENST00000480327 EYA3Q99504 573 aa11.42□□□□□ -0.58
VCP-206ENST00000480327 GGA3Q9NZ52 723 aa11.42□□□□□ -0.58
VCP-206ENST00000480327 ECM29Q5VYK3 1845 aa11.42□□□□□ -0.58
VCP-206ENST00000480327 LAMB1P07942 1786 aa11.41□□□□□ -0.58
VCP-206ENST00000480327 KIF23Q02241 960 aaPredicted RBP11.41□□□□□ -0.58
VCP-206ENST00000480327 DGKZQ13574 1117 aa11.41□□□□□ -0.58
VCP-206ENST00000480327 FTSJ3Q8IY81 847 aaKnown RBP11.41□□□□□ -0.58
VCP-206ENST00000480327 CDCA5Q96FF9 252 aa11.41□□□□□ -0.58
VCP-206ENST00000480327 ZC3H12CQ9C0D7 883 aaKnown RBP11.41□□□□□ -0.58
VCP-206ENST00000480327 C9orf78Q9NZ63 289 aaPredicted RBP11.41□□□□□ -0.58
VCP-206ENST00000480327 SCAF8Q9UPN6 1271 aaKnown RBP11.41□□□□□ -0.58
VCP-206ENST00000480327 PDE8AO60658 829 aa11.4□□□□□ -0.58
VCP-206ENST00000480327 ALDH1L1O75891 902 aa11.4□□□□□ -0.58
VCP-206ENST00000480327 SLC34A2O95436 690 aa11.4□□□□□ -0.58
VCP-206ENST00000480327 SLC10A3P09131 477 aa11.4□□□□□ -0.58
VCP-206ENST00000480327 RLBP1P12271 317 aa11.4□□□□□ -0.58
VCP-206ENST00000480327 CCT4P50991 539 aaKnown RBP11.4□□□□□ -0.58
VCP-206ENST00000480327 RSBN1LQ6PCB5 846 aaPredicted RBP11.4□□□□□ -0.58
VCP-206ENST00000480327 DZIP1LQ8IYY4 767 aaKnown RBP11.4□□□□□ -0.58
VCP-206ENST00000480327 TMEM57Q8N5G2 664 aa11.4□□□□□ -0.58
VCP-206ENST00000480327 PANK1Q8TE04 598 aa11.4□□□□□ -0.58
VCP-206ENST00000480327 DCPSQ96C86 337 aaKnown RBP11.4□□□□□ -0.58
VCP-206ENST00000480327 GGA1Q9UJY5 639 aa11.4□□□□□ -0.58
VCP-206ENST00000480327 PDE4DIPQ5VU43 2346 aa11.4□□□□□ -0.59
VCP-206ENST00000480327 H7C1W4 665 aa11.39□□□□□ -0.59
VCP-206ENST00000480327 GRM8O00222 908 aa11.39□□□□□ -0.59
VCP-206ENST00000480327 ZNF157P51786 506 aaPredicted RBP11.39□□□□□ -0.59
VCP-206ENST00000480327 MLLT1Q03111 559 aaPredicted RBP11.39□□□□□ -0.59
VCP-206ENST00000480327 SCARF1Q14162 830 aa11.39□□□□□ -0.59
VCP-206ENST00000480327 ANGEL2Q5VTE6 544 aaKnown RBP11.39□□□□□ -0.59
VCP-206ENST00000480327 MOB2Q70IA6 237 aa11.39□□□□□ -0.59
VCP-206ENST00000480327 C2orf69Q8N8R5 385 aa11.39□□□□□ -0.59
VCP-206ENST00000480327 CSRNP1Q96S65 589 aa11.39□□□□□ -0.59
VCP-206ENST00000480327 MXD3Q9BW11 206 aa11.39□□□□□ -0.59
VCP-206ENST00000480327 RNF186Q9NXI6 227 aa11.39□□□□□ -0.59
VCP-206ENST00000480327 ANKIB1Q9P2G1 1089 aa11.39□□□□□ -0.59
VCP-206ENST00000480327 XDHP47989 1333 aa11.38□□□□□ -0.59
VCP-206ENST00000480327 NBPF7P0C2Y1 421 aaPredicted RBP11.38□□□□□ -0.59
VCP-206ENST00000480327 CCDC152Q4G0S7 254 aa11.38□□□□□ -0.59
VCP-206ENST00000480327 C20orf194Q5TEA3 1177 aa11.38□□□□□ -0.59
VCP-206ENST00000480327 INTS3Q68E01 1043 aaKnown RBP11.38□□□□□ -0.59
VCP-206ENST00000480327 TXNRD3Q86VQ6 643 aa11.38□□□□□ -0.59
VCP-206ENST00000480327 RASAL3Q86YV0 1011 aa11.38□□□□□ -0.59
VCP-206ENST00000480327 ITPRIPQ8IWB1 547 aa11.38□□□□□ -0.59
VCP-206ENST00000480327 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.38□□□□□ -0.59
VCP-206ENST00000480327 AGBL3Q8NEM8 1001 aa11.38□□□□□ -0.59
VCP-206ENST00000480327 TTLL11Q8NHH1 800 aa11.38□□□□□ -0.59
VCP-206ENST00000480327 CCDC102AQ96A19 550 aa11.38□□□□□ -0.59
VCP-206ENST00000480327 USP44Q9H0E7 712 aa11.38□□□□□ -0.59
VCP-206ENST00000480327 SAGE1Q9NXZ1 904 aa11.38□□□□□ -0.59
VCP-206ENST00000480327 HTTP42858 3142 aa11.38□□□□□ -0.59
VCP-206ENST00000480327 TRPA1O75762 1119 aa11.37□□□□□ -0.59
VCP-206ENST00000480327 CASP7P55210 303 aa11.37□□□□□ -0.59
VCP-206ENST00000480327 RRP1P56182 461 aaKnown RBP11.37□□□□□ -0.59
VCP-206ENST00000480327 CTSWP56202 376 aa11.37□□□□□ -0.59
VCP-206ENST00000480327 SULF1Q8IWU6 871 aa11.37□□□□□ -0.59
VCP-206ENST00000480327 GREM2Q9H772 168 aa11.37□□□□□ -0.59
VCP-206ENST00000480327 MYOZ2Q9NPC6 264 aa11.37□□□□□ -0.59
VCP-206ENST00000480327 MINPP1Q9UNW1 487 aa11.37□□□□□ -0.59
VCP-206ENST00000480327 SUPT16HQ9Y5B9 1047 aaKnown RBP11.37□□□□□ -0.59
VCP-206ENST00000480327 MED23Q9ULK4 1368 aa11.37□□□□□ -0.59
VCP-206ENST00000480327 USP17L8P0C7I0 530 aa11.36□□□□□ -0.59
VCP-206ENST00000480327 ATP2B4P23634 1241 aa11.36□□□□□ -0.59
VCP-206ENST00000480327 KLRK1P26718 216 aa11.36□□□□□ -0.59
VCP-206ENST00000480327 NBPF9Q3BBW0 867 aa11.36□□□□□ -0.59
VCP-206ENST00000480327 EPHA10Q5JZY3 1008 aa11.36□□□□□ -0.59
VCP-206ENST00000480327 DACT2Q5SW24 774 aa11.36□□□□□ -0.59
VCP-206ENST00000480327 PRAMEF18Q5VWM3 479 aa11.36□□□□□ -0.59
VCP-206ENST00000480327 ANKRD18AQ8IVF6 992 aa11.36□□□□□ -0.59
VCP-206ENST00000480327 SUCLG2Q96I99 432 aa11.36□□□□□ -0.59
VCP-206ENST00000480327 MEIS3Q99687 375 aa11.36□□□□□ -0.59
VCP-206ENST00000480327 COG6Q9Y2V7 657 aa11.36□□□□□ -0.59
VCP-206ENST00000480327 CHMP3Q9Y3E7 222 aa11.36□□□□□ -0.59
VCP-206ENST00000480327 PITPNM2Q9BZ72 1349 aa11.35□□□□□ -0.59
VCP-206ENST00000480327 USP17L3A6NCW0 530 aa11.35□□□□□ -0.59
VCP-206ENST00000480327 USP17L4A6NCW7 530 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms