RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 SLC12A1Q13621 1099 aa12.39□□□□□ -0.43
EWSR1-216ENST00000479135 RNF34Q969K3 372 aa12.39□□□□□ -0.43
EWSR1-216ENST00000479135 FAM13AO94988 1023 aa12.39□□□□□ -0.43
EWSR1-216ENST00000479135 WDR48Q8TAF3 677 aa12.39□□□□□ -0.43
EWSR1-216ENST00000479135 ANO10Q9NW15 660 aa12.39□□□□□ -0.43
EWSR1-216ENST00000479135 DAAM1Q9Y4D1 1078 aa12.39□□□□□ -0.43
EWSR1-216ENST00000479135 BRD2P25440 801 aaKnown RBP12.39□□□□□ -0.43
EWSR1-216ENST00000479135 POMGNT1Q8WZA1 660 aa12.39□□□□□ -0.43
EWSR1-216ENST00000479135 TRIM31Q9BZY9 425 aa12.39□□□□□ -0.43
EWSR1-216ENST00000479135 AFMP43652 599 aa12.39□□□□□ -0.43
EWSR1-216ENST00000479135 KIFC2Q96AC6 838 aa12.39□□□□□ -0.43
EWSR1-216ENST00000479135 AGTPBP1Q9UPW5 1226 aa12.39□□□□□ -0.43
EWSR1-216ENST00000479135 RIPOR2Q9Y4F9 1068 aa12.39□□□□□ -0.43
EWSR1-216ENST00000479135 CTAGE8P0CG41 777 aa12.39□□□□□ -0.43
EWSR1-216ENST00000479135 PSME1Q06323 249 aa12.39□□□□□ -0.43
EWSR1-216ENST00000479135 CETN1Q12798 172 aa12.39□□□□□ -0.43
EWSR1-216ENST00000479135 CTAGE4Q8IX94 777 aa12.39□□□□□ -0.43
EWSR1-216ENST00000479135 SPDYE16A6NNV3 312 aaPredicted RBP12.38□□□□□ -0.43
EWSR1-216ENST00000479135 SPDYE2Q495Y8 402 aa12.38□□□□□ -0.43
EWSR1-216ENST00000479135 CCDC92Q53HC0 331 aaPredicted RBP12.38□□□□□ -0.43
EWSR1-216ENST00000479135 BLOC1S2Q6QNY1 142 aa12.38□□□□□ -0.43
EWSR1-216ENST00000479135 ZNF622Q969S3 477 aaKnown RBP eCLIP12.38□□□□□ -0.435e-8■■□□□ 12.4
EWSR1-216ENST00000479135 EFCC1Q9HA90 598 aa12.38□□□□□ -0.43
EWSR1-216ENST00000479135 OLA1Q9NTK5 396 aaKnown RBP12.38□□□□□ -0.43
EWSR1-216ENST00000479135 STX6O43752 255 aa12.38□□□□□ -0.43
EWSR1-216ENST00000479135 ITIH3Q06033 890 aa12.38□□□□□ -0.43
EWSR1-216ENST00000479135 CLUL1Q15846 466 aa12.38□□□□□ -0.43
EWSR1-216ENST00000479135 IFT74Q96LB3 600 aa12.38□□□□□ -0.43
EWSR1-216ENST00000479135 API5Q9BZZ5 524 aaKnown RBP12.38□□□□□ -0.43
EWSR1-216ENST00000479135 KRT82Q9NSB4 513 aa12.38□□□□□ -0.43
EWSR1-216ENST00000479135 IGF1RP08069 1367 aa12.38□□□□□ -0.43
EWSR1-216ENST00000479135 AKR1B10O60218 316 aa12.38□□□□□ -0.43
EWSR1-216ENST00000479135 TFIP11Q9UBB9 837 aaKnown RBP12.38□□□□□ -0.43
EWSR1-216ENST00000479135 ROCK1Q13464 1354 aa12.38□□□□□ -0.43
EWSR1-216ENST00000479135 ATP2A1O14983 1001 aa12.38□□□□□ -0.43
EWSR1-216ENST00000479135 GAS8O95995 478 aa12.38□□□□□ -0.43
EWSR1-216ENST00000479135 SERPINB6P35237 376 aa12.38□□□□□ -0.43
EWSR1-216ENST00000479135 VSIG1Q86XK7 387 aa12.38□□□□□ -0.43
EWSR1-216ENST00000479135 FAM76AQ8TAV0 307 aa12.38□□□□□ -0.43
EWSR1-216ENST00000479135 PIP4K2CQ8TBX8 421 aa12.38□□□□□ -0.43
EWSR1-216ENST00000479135 MKNK2Q9HBH9 465 aa12.38□□□□□ -0.43
EWSR1-216ENST00000479135 TBCAO75347 108 aaKnown RBP12.37□□□□□ -0.43
EWSR1-216ENST00000479135 KCNA1Q09470 495 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 PDZRN3Q9UPQ7 1066 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 CARSP49589 748 aaKnown RBP12.37□□□□□ -0.43
EWSR1-216ENST00000479135 CSPG5O95196 566 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 U2AF2P26368 475 aaKnown RBP eCLIP12.37□□□□□ -0.435e-15■■■■□ 22.3
EWSR1-216ENST00000479135 POLE2P56282 527 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 FBXW4P57775 412 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 BSPRYQ5W0U4 402 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 CASC4Q6P4E1 433 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.37□□□□□ -0.43
EWSR1-216ENST00000479135 CUL5Q93034 780 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 ARAP1Q96P48 1450 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 INPP5BP32019 993 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 NOP14P78316 857 aaKnown RBP12.37□□□□□ -0.43
EWSR1-216ENST00000479135 ANKRD1Q15327 319 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 UBE3BQ7Z3V4 1068 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 IRAK4Q9NWZ3 460 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 ZBTB21Q9ULJ3 1066 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 VCX3AQ9NNX9 186 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 RANBP6O60518 1105 aaKnown RBP12.37□□□□□ -0.43
EWSR1-216ENST00000479135 BCAR3O75815 825 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 SAT1P21673 171 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 AACSQ86V21 672 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 NKIRAS1Q9NYS0 192 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 PAIP2BQ9ULR5 123 aaKnown RBP12.37□□□□□ -0.43
EWSR1-216ENST00000479135 CCDC171Q6TFL3 1326 aa12.37□□□□□ -0.43
EWSR1-216ENST00000479135 CDKL5O76039 1030 aa12.36□□□□□ -0.43
EWSR1-216ENST00000479135 TTF1Q15361 905 aaPredicted RBP12.36□□□□□ -0.43
EWSR1-216ENST00000479135 MPP4Q96JB8 637 aa12.36□□□□□ -0.43
EWSR1-216ENST00000479135 RPS6KA2Q15349 733 aa12.36□□□□□ -0.43
EWSR1-216ENST00000479135 MINK1Q8N4C8 1332 aaPredicted RBP12.36□□□□□ -0.43
EWSR1-216ENST00000479135 SPDYE2BA6NHP3 402 aa12.36□□□□□ -0.43
EWSR1-216ENST00000479135 SPDYE6P0CI01 402 aa12.36□□□□□ -0.43
EWSR1-216ENST00000479135 JADE1Q6IE81 842 aa12.36□□□□□ -0.43
EWSR1-216ENST00000479135 TRIML2Q8N7C3 387 aa12.36□□□□□ -0.43
EWSR1-216ENST00000479135 NLRP2Q9NX02 1062 aa12.36□□□□□ -0.43
EWSR1-216ENST00000479135 GUCA1BQ9UMX6 200 aa12.36□□□□□ -0.43
EWSR1-216ENST00000479135 ARHGAP44Q17R89 818 aa12.36□□□□□ -0.43
EWSR1-216ENST00000479135 MPHOSPH8Q99549 860 aa12.36□□□□□ -0.43
EWSR1-216ENST00000479135 DDX42Q86XP3 938 aaKnown RBP eCLIP12.36□□□□□ -0.43
EWSR1-216ENST00000479135 TRIM47Q96LD4 638 aa12.36□□□□□ -0.43
EWSR1-216ENST00000479135 NEK1Q96PY6 1258 aa12.36□□□□□ -0.43
EWSR1-216ENST00000479135 PPP1R9AQ9ULJ8 1098 aa12.36□□□□□ -0.43
EWSR1-216ENST00000479135 LZTS1Q9Y250 596 aa12.36□□□□□ -0.43
EWSR1-216ENST00000479135 EEF1DP29692 281 aaKnown RBP12.36□□□□□ -0.43
EWSR1-216ENST00000479135 FSIP1Q8NA03 581 aa12.36□□□□□ -0.43
EWSR1-216ENST00000479135 EID1Q9Y6B2 187 aa12.36□□□□□ -0.43
EWSR1-216ENST00000479135 PHLDB1Q86UU1 1377 aa12.35□□□□□ -0.43
EWSR1-216ENST00000479135 PALM2Q8IXS6 379 aa12.35□□□□□ -0.43
EWSR1-216ENST00000479135 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.35□□□□□ -0.43
EWSR1-216ENST00000479135 ZBED9Q6R2W3 1325 aa12.35□□□□□ -0.43
EWSR1-216ENST00000479135 CADPSQ9ULU8 1353 aa12.35□□□□□ -0.43
EWSR1-216ENST00000479135 TMEM266Q2M3C6 531 aa12.35□□□□□ -0.43
EWSR1-216ENST00000479135 EEF1B2P24534 225 aaKnown RBP12.35□□□□□ -0.43
EWSR1-216ENST00000479135 ATP6V0A2Q9Y487 856 aa12.35□□□□□ -0.43
EWSR1-216ENST00000479135 TRIM60Q495X7 471 aa12.35□□□□□ -0.43
EWSR1-216ENST00000479135 DDX12PQ92771 950 aa12.35□□□□□ -0.43
EWSR1-216ENST00000479135 TTC1Q99614 292 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms