RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 FSIP1Q8NA03 581 aa24.5■■□□□ 1.51
SDF4-206ENST00000478938 FAM71BQ8TC56 605 aa24.5■■□□□ 1.51
SDF4-206ENST00000478938 STK26Q9P289 416 aa24.5■■□□□ 1.51
SDF4-206ENST00000478938 FAM160A1Q05DH4 1040 aa24.5■■□□□ 1.51
SDF4-206ENST00000478938 BIN1O00499 593 aa24.49■■□□□ 1.51
SDF4-206ENST00000478938 ATP1A3P13637 1013 aa24.49■■□□□ 1.51
SDF4-206ENST00000478938 ZKSCAN1P17029 563 aaPredicted RBP24.49■■□□□ 1.51
SDF4-206ENST00000478938 MCM10Q7L590 875 aa24.49■■□□□ 1.51
SDF4-206ENST00000478938 H3BQV1 296 aa24.49■■□□□ 1.51
SDF4-206ENST00000478938 FANCCQ00597 558 aa24.49■■□□□ 1.51
SDF4-206ENST00000478938 NECTIN1Q15223 517 aa24.49■■□□□ 1.51
SDF4-206ENST00000478938 IFFO2Q5TF58 517 aa24.49■■□□□ 1.51
SDF4-206ENST00000478938 LRCH2Q5VUJ6 765 aa24.49■■□□□ 1.51
SDF4-206ENST00000478938 CEP120Q8N960 986 aa24.49■■□□□ 1.51
SDF4-206ENST00000478938 CASP8Q14790 479 aa24.49■■□□□ 1.51
SDF4-206ENST00000478938 CREB3L3Q68CJ9 461 aa24.49■■□□□ 1.51
SDF4-206ENST00000478938 KCNB2Q92953 911 aa24.49■■□□□ 1.51
SDF4-206ENST00000478938 SGSM3Q96HU1 749 aa24.49■■□□□ 1.51
SDF4-206ENST00000478938 RAI14Q9P0K7 980 aa24.49■■□□□ 1.51
SDF4-206ENST00000478938 ADGRB3O60242 1522 aa24.48■■□□□ 1.51
SDF4-206ENST00000478938 CHL1O00533 1208 aa24.48■■□□□ 1.51
SDF4-206ENST00000478938 DHX8Q14562 1220 aaKnown RBP24.48■■□□□ 1.51
SDF4-206ENST00000478938 CPLX2Q6PUV4 134 aaKnown RBP24.48■■□□□ 1.51
SDF4-206ENST00000478938 DPF2Q92785 391 aa24.48■■□□□ 1.51
SDF4-206ENST00000478938 RBM8AQ9Y5S9 174 aaKnown RBP24.48■■□□□ 1.51
SDF4-206ENST00000478938 SOS1Q07889 1333 aaPredicted RBP24.48■■□□□ 1.51
SDF4-206ENST00000478938 ADD1P35611 737 aaKnown RBP24.48■■□□□ 1.51
SDF4-206ENST00000478938 RNF217Q8TC41 542 aa24.48■■□□□ 1.51
SDF4-206ENST00000478938 JPH2Q9BR39 696 aaPredicted RBP24.48■■□□□ 1.51
SDF4-206ENST00000478938 GOLIM4O00461 696 aa24.47■■□□□ 1.51
SDF4-206ENST00000478938 USP5P45974 858 aa24.47■■□□□ 1.51
SDF4-206ENST00000478938 ERC1Q8IUD2 1116 aa24.47■■□□□ 1.51
SDF4-206ENST00000478938 SDF4Q9BRK5 362 aa24.47■■□□□ 1.51
SDF4-206ENST00000478938 MIS18AQ9NYP9 233 aa24.47■■□□□ 1.51
SDF4-206ENST00000478938 TAF6LQ9Y6J9 622 aa24.47■■□□□ 1.51
SDF4-206ENST00000478938 TOB2Q14106 344 aaPredicted RBP24.47■■□□□ 1.51
SDF4-206ENST00000478938 HSP90AB3PQ58FF7 597 aa24.47■■□□□ 1.51
SDF4-206ENST00000478938 CCDC12Q8WUD4 166 aaPredicted RBP24.47■■□□□ 1.51
SDF4-206ENST00000478938 NCAPHQ15003 741 aa24.46■■□□□ 1.51
SDF4-206ENST00000478938 KARSQ15046 597 aaKnown RBP24.46■■□□□ 1.51
SDF4-206ENST00000478938 ERLIN1O75477 346 aa24.46■■□□□ 1.51
SDF4-206ENST00000478938 WDHD1O75717 1129 aaPredicted RBP24.46■■□□□ 1.51
SDF4-206ENST00000478938 TOGARAM2Q6ZUX3 1019 aa24.46■■□□□ 1.51
SDF4-206ENST00000478938 TMEM139Q8IV31 216 aa24.46■■□□□ 1.51
SDF4-206ENST00000478938 RAB21Q9UL25 225 aa24.46■■□□□ 1.51
SDF4-206ENST00000478938 MINK1Q8N4C8 1332 aaPredicted RBP24.45■■□□□ 1.5
SDF4-206ENST00000478938 SURF6O75683 361 aaKnown RBP24.45■■□□□ 1.5
SDF4-206ENST00000478938 RCOR1Q9UKL0 485 aa24.45■■□□□ 1.5
SDF4-206ENST00000478938 RNF40O75150 1001 aa24.45■■□□□ 1.5
SDF4-206ENST00000478938 HDGFL2Q7Z4V5 671 aaPredicted RBP24.45■■□□□ 1.5
SDF4-206ENST00000478938 SRGAP1Q7Z6B7 1085 aa24.45■■□□□ 1.5
SDF4-206ENST00000478938 FCHSD1Q86WN1 690 aa24.45■■□□□ 1.5
SDF4-206ENST00000478938 USP28Q96RU2 1077 aa24.45■■□□□ 1.5
SDF4-206ENST00000478938 IRX2Q9BZI1 471 aaPredicted RBP24.45■■□□□ 1.5
SDF4-206ENST00000478938 LRRIQ3A6PVS8 624 aaPredicted RBP24.44■■□□□ 1.5
SDF4-206ENST00000478938 CUTAO60888 179 aa24.44■■□□□ 1.5
SDF4-206ENST00000478938 RHOXF2BP0C7M4 288 aa24.44■■□□□ 1.5
SDF4-206ENST00000478938 ME1P48163 572 aa24.44■■□□□ 1.5
SDF4-206ENST00000478938 CCT5P48643 541 aa24.44■■□□□ 1.5
SDF4-206ENST00000478938 VSNL1P62760 191 aa24.44■■□□□ 1.5
SDF4-206ENST00000478938 MAP9Q49MG5 647 aa24.44■■□□□ 1.5
SDF4-206ENST00000478938 TMED8Q6PL24 325 aaPredicted RBP24.44■■□□□ 1.5
SDF4-206ENST00000478938 MSL3Q8N5Y2 521 aaKnown RBP24.44■■□□□ 1.5
SDF4-206ENST00000478938 RHOXF2Q9BQY4 288 aa24.44■■□□□ 1.5
SDF4-206ENST00000478938 FAM107BQ9H098 131 aa24.44■■□□□ 1.5
SDF4-206ENST00000478938 PPLO60437 1756 aa24.44■■□□□ 1.5
SDF4-206ENST00000478938 CHD2O14647 1828 aaKnown RBP24.44■■□□□ 1.5
SDF4-206ENST00000478938 USP8P40818 1118 aa24.44■■□□□ 1.5
SDF4-206ENST00000478938 BLOC1S2Q6QNY1 142 aa24.44■■□□□ 1.5
SDF4-206ENST00000478938 GBP6Q6ZN66 633 aa24.44■■□□□ 1.5
SDF4-206ENST00000478938 RHPN1Q8TCX5 695 aa24.44■■□□□ 1.5
SDF4-206ENST00000478938 AFAP1L1Q8TED9 768 aa24.44■■□□□ 1.5
SDF4-206ENST00000478938 RUFY2Q8WXA3 655 aa24.44■■□□□ 1.5
SDF4-206ENST00000478938 FAM169AQ9Y6X4 670 aa24.44■■□□□ 1.5
SDF4-206ENST00000478938 TMEM232C9JQI7 657 aa24.43■■□□□ 1.5
SDF4-206ENST00000478938 ARHGAP6O43182 974 aa24.43■■□□□ 1.5
SDF4-206ENST00000478938 PPP1R12AO14974 1030 aaPredicted RBP24.42■■□□□ 1.5
SDF4-206ENST00000478938 GIMAP7Q8NHV1 300 aa24.42■■□□□ 1.5
SDF4-206ENST00000478938 BPIFA3Q9BQP9 254 aa24.42■■□□□ 1.5
SDF4-206ENST00000478938 DESI2Q9BSY9 194 aa24.42■■□□□ 1.5
SDF4-206ENST00000478938 A0A1B0GVL5 298 aa24.42■■□□□ 1.5
SDF4-206ENST00000478938 SLC27A2O14975 620 aa24.42■■□□□ 1.5
SDF4-206ENST00000478938 TFRCP02786 760 aaKnown RBP24.42■■□□□ 1.5
SDF4-206ENST00000478938 MSANTD4Q8NCY6 345 aa24.42■■□□□ 1.5
SDF4-206ENST00000478938 KIAA1468Q9P260 1216 aa24.42■■□□□ 1.5
SDF4-206ENST00000478938 MAP2P11137 1827 aaKnown RBP24.42■■□□□ 1.5
SDF4-206ENST00000478938 KIF20BQ96Q89 1820 aa24.42■■□□□ 1.5
SDF4-206ENST00000478938 EFCAB6Q5THR3 1501 aa24.41■■□□□ 1.5
SDF4-206ENST00000478938 UBASH3AP57075 661 aa24.41■■□□□ 1.5
SDF4-206ENST00000478938 TRDNQ13061 729 aa24.41■■□□□ 1.5
SDF4-206ENST00000478938 FMR1NBQ8N0W7 255 aaPredicted RBP24.41■■□□□ 1.5
SDF4-206ENST00000478938 GNL3LQ9NVN8 582 aaKnown RBP24.41■■□□□ 1.5
SDF4-206ENST00000478938 SCRN1Q12765 414 aa24.41■■□□□ 1.5
SDF4-206ENST00000478938 HSD3B7Q9H2F3 369 aa24.41■■□□□ 1.5
SDF4-206ENST00000478938 RPS6KB1P23443 525 aa24.4■■□□□ 1.5
SDF4-206ENST00000478938 PSMA5P28066 241 aa24.4■■□□□ 1.5
SDF4-206ENST00000478938 ANKRD1Q15327 319 aa24.4■■□□□ 1.5
SDF4-206ENST00000478938 CFAP100Q494V2 611 aa24.4■■□□□ 1.5
SDF4-206ENST00000478938 RABEP2Q9H5N1 569 aa24.4■■□□□ 1.5
SDF4-206ENST00000478938 SIL1Q9H173 461 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms