RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 LEMD3Q9Y2U8 911 aa16.63■□□□□ 0.25
ABCF3-212ENST00000478288 MYO3BQ8WXR4 1341 aa16.63■□□□□ 0.25
ABCF3-212ENST00000478288 CCT4P50991 539 aaKnown RBP16.62■□□□□ 0.25
ABCF3-212ENST00000478288 SCARF1Q14162 830 aa16.62■□□□□ 0.25
ABCF3-212ENST00000478288 GCKRQ14397 625 aa16.62■□□□□ 0.25
ABCF3-212ENST00000478288 ANGEL2Q5VTE6 544 aaKnown RBP16.62■□□□□ 0.25
ABCF3-212ENST00000478288 G2E3Q7L622 706 aa16.62■□□□□ 0.25
ABCF3-212ENST00000478288 CDCA5Q96FF9 252 aa16.62■□□□□ 0.25
ABCF3-212ENST00000478288 COA1Q9GZY4 146 aa16.62■□□□□ 0.25
ABCF3-212ENST00000478288 MYH16Q9H6N6 1097 aa16.62■□□□□ 0.25
ABCF3-212ENST00000478288 FANCIQ9NVI1 1328 aa16.62■□□□□ 0.25
ABCF3-212ENST00000478288 PDE4DIPQ5VU43 2346 aa16.61■□□□□ 0.25
ABCF3-212ENST00000478288 SLC10A3P09131 477 aa16.61■□□□□ 0.25
ABCF3-212ENST00000478288 IGHMBP2P38935 993 aaKnown RBP16.61■□□□□ 0.25
ABCF3-212ENST00000478288 ZNF157P51786 506 aaPredicted RBP16.61■□□□□ 0.25
ABCF3-212ENST00000478288 CASP7P55210 303 aa16.61■□□□□ 0.25
ABCF3-212ENST00000478288 DACT2Q5SW24 774 aa16.61■□□□□ 0.25
ABCF3-212ENST00000478288 STRIP1Q5VSL9 837 aa16.61■□□□□ 0.25
ABCF3-212ENST00000478288 REM2Q8IYK8 340 aaPredicted RBP16.61■□□□□ 0.25
ABCF3-212ENST00000478288 LINS1Q8NG48 757 aa16.61■□□□□ 0.25
ABCF3-212ENST00000478288 ZIC5Q96T25 663 aa16.61■□□□□ 0.25
ABCF3-212ENST00000478288 ASTN2O75129 1339 aaPredicted RBP16.61■□□□□ 0.25
ABCF3-212ENST00000478288 A0A1B0GUL6 1792 aa16.6■□□□□ 0.25
ABCF3-212ENST00000478288 CSF1RP07333 972 aa16.6■□□□□ 0.25
ABCF3-212ENST00000478288 WDR63Q8IWG1 891 aa16.6■□□□□ 0.25
ABCF3-212ENST00000478288 DNAAF4Q8WXU2 420 aa16.6■□□□□ 0.25
ABCF3-212ENST00000478288 ANKRD2Q9GZV1 360 aa16.6■□□□□ 0.25
ABCF3-212ENST00000478288 ITGA6P23229 1130 aa16.59■□□□□ 0.25
ABCF3-212ENST00000478288 RGS19P49795 217 aa16.59■□□□□ 0.25
ABCF3-212ENST00000478288 FKBP5Q13451 457 aaPredicted RBP16.59■□□□□ 0.25
ABCF3-212ENST00000478288 OGFOD1Q8N543 542 aa16.59■□□□□ 0.25
ABCF3-212ENST00000478288 MCOLN1Q9GZU1 580 aa16.59■□□□□ 0.25
ABCF3-212ENST00000478288 KIF23Q02241 960 aaPredicted RBP16.58■□□□□ 0.24
ABCF3-212ENST00000478288 FAM161AQ3B820 660 aa16.58■□□□□ 0.24
ABCF3-212ENST00000478288 ZNF804BA4D1E1 1349 aa16.58■□□□□ 0.24
ABCF3-212ENST00000478288 ECM29Q5VYK3 1845 aa16.57■□□□□ 0.24
ABCF3-212ENST00000478288 WTIPA6NIX2 430 aaPredicted RBP16.57■□□□□ 0.24
ABCF3-212ENST00000478288 VAMP4O75379 141 aa16.57■□□□□ 0.24
ABCF3-212ENST00000478288 RASAL3Q86YV0 1011 aa16.57■□□□□ 0.24
ABCF3-212ENST00000478288 MPHOSPH8Q99549 860 aa16.57■□□□□ 0.24
ABCF3-212ENST00000478288 MRS2Q9HD23 443 aa16.57■□□□□ 0.24
ABCF3-212ENST00000478288 WNT10BO00744 389 aa16.56■□□□□ 0.24
ABCF3-212ENST00000478288 C15orf52Q6ZUT6 534 aaKnown RBP16.56■□□□□ 0.24
ABCF3-212ENST00000478288 TXNRD3Q86VQ6 643 aa16.56■□□□□ 0.24
ABCF3-212ENST00000478288 COL1A1P02452 1464 aaPredicted RBP16.55■□□□□ 0.24
ABCF3-212ENST00000478288 TNRC18O15417 2968 aaPredicted RBP16.55■□□□□ 0.24
ABCF3-212ENST00000478288 CCDC85CA6NKD9 419 aa16.55■□□□□ 0.24
ABCF3-212ENST00000478288 NBPF9Q3BBW0 867 aa16.55■□□□□ 0.24
ABCF3-212ENST00000478288 CSRNP1Q96S65 589 aa16.55■□□□□ 0.24
ABCF3-212ENST00000478288 RNF186Q9NXI6 227 aa16.55■□□□□ 0.24
ABCF3-212ENST00000478288 IRS2Q9Y4H2 1338 aa16.54■□□□□ 0.24
ABCF3-212ENST00000478288 ANKRD18BA2A2Z9 1011 aa16.54■□□□□ 0.24
ABCF3-212ENST00000478288 CHRNDQ07001 517 aa16.54■□□□□ 0.24
ABCF3-212ENST00000478288 DGKZQ13574 1117 aa16.54■□□□□ 0.24
ABCF3-212ENST00000478288 TTLL5Q6EMB2 1281 aa16.54■□□□□ 0.24
ABCF3-212ENST00000478288 ANP32CO43423 234 aa16.53■□□□□ 0.24
ABCF3-212ENST00000478288 KLRK1P26718 216 aa16.53■□□□□ 0.24
ABCF3-212ENST00000478288 NF2P35240 595 aa16.53■□□□□ 0.24
ABCF3-212ENST00000478288 KCNJ4P48050 445 aa16.53■□□□□ 0.24
ABCF3-212ENST00000478288 BEND3Q5T5X7 828 aa16.53■□□□□ 0.24
ABCF3-212ENST00000478288 APOBEC3FQ8IUX4 373 aaKnown RBP16.53■□□□□ 0.24
ABCF3-212ENST00000478288 ZBED3Q96IU2 234 aaPredicted RBP16.53■□□□□ 0.24
ABCF3-212ENST00000478288 MXD3Q9BW11 206 aa16.53■□□□□ 0.24
ABCF3-212ENST00000478288 HDAC9Q9UKV0 1011 aa16.53■□□□□ 0.24
ABCF3-212ENST00000478288 LAMB1P07942 1786 aa16.52■□□□□ 0.24
ABCF3-212ENST00000478288 TRPA1O75762 1119 aa16.52■□□□□ 0.24
ABCF3-212ENST00000478288 FOXO4P98177 505 aa16.52■□□□□ 0.24
ABCF3-212ENST00000478288 MLLT1Q03111 559 aaPredicted RBP16.52■□□□□ 0.24
ABCF3-212ENST00000478288 EXOSC9Q06265 439 aaKnown RBP16.52■□□□□ 0.24
ABCF3-212ENST00000478288 IFIT5Q13325 482 aaKnown RBP16.52■□□□□ 0.24
ABCF3-212ENST00000478288 ZEB1P37275 1124 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-212ENST00000478288 FKBP1AP62942 108 aaKnown RBP16.51■□□□□ 0.23
ABCF3-212ENST00000478288 MTMR14Q8NCE2 650 aa16.51■□□□□ 0.23
ABCF3-212ENST00000478288 FBXW7Q969H0 707 aa16.51■□□□□ 0.23
ABCF3-212ENST00000478288 CD209Q9NNX6 404 aa16.51■□□□□ 0.23
ABCF3-212ENST00000478288 IL1R1P14778 569 aa16.5■□□□□ 0.23
ABCF3-212ENST00000478288 GTF2IP78347 998 aa16.5■□□□□ 0.23
ABCF3-212ENST00000478288 KIAA0825Q8IV33 1275 aa16.5■□□□□ 0.23
ABCF3-212ENST00000478288 GRM8O00222 908 aa16.49■□□□□ 0.23
ABCF3-212ENST00000478288 SASH1O94885 1247 aa16.49■□□□□ 0.23
ABCF3-212ENST00000478288 NOM1Q5C9Z4 860 aaKnown RBP16.49■□□□□ 0.23
ABCF3-212ENST00000478288 MOB2Q70IA6 237 aa16.49■□□□□ 0.23
ABCF3-212ENST00000478288 ZNF804AQ7Z570 1209 aa16.49■□□□□ 0.23
ABCF3-212ENST00000478288 PPP2R3BQ9Y5P8 575 aa16.49■□□□□ 0.23
ABCF3-212ENST00000478288 ARAP2Q8WZ64 1704 aa16.48■□□□□ 0.23
ABCF3-212ENST00000478288 F6X3S4 739 aa16.48■□□□□ 0.23
ABCF3-212ENST00000478288 ALDH1L1O75891 902 aa16.48■□□□□ 0.23
ABCF3-212ENST00000478288 TM4SF4P48230 202 aa16.48■□□□□ 0.23
ABCF3-212ENST00000478288 CCDC57Q2TAC2 916 aa16.48■□□□□ 0.23
ABCF3-212ENST00000478288 CTU1Q7Z7A3 348 aaKnown RBP16.48■□□□□ 0.23
ABCF3-212ENST00000478288 SPINK5Q9NQ38 1064 aaPredicted RBP16.48■□□□□ 0.23
ABCF3-212ENST00000478288 SCAF8Q9UPN6 1271 aaKnown RBP16.48■□□□□ 0.23
ABCF3-212ENST00000478288 HTTP42858 3142 aa16.48■□□□□ 0.23
ABCF3-212ENST00000478288 UBE2Q2LH0YL09 131 aa16.47■□□□□ 0.23
ABCF3-212ENST00000478288 TTLL12Q14166 644 aaPredicted RBP16.47■□□□□ 0.23
ABCF3-212ENST00000478288 PRAMEF18Q5VWM3 479 aa16.47■□□□□ 0.23
ABCF3-212ENST00000478288 LMBR1LQ6UX01 489 aa16.47■□□□□ 0.23
ABCF3-212ENST00000478288 ARMC9Q7Z3E5 817 aa16.47■□□□□ 0.23
ABCF3-212ENST00000478288 CERS5Q8N5B7 392 aa16.47■□□□□ 0.23
ABCF3-212ENST00000478288 CFHR5Q9BXR6 569 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms