RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	CKAP4	Q07065	602 aa	Known RBP	7	□□□□□ -1.29
HNRNPU-208	ENST00000475997	HLTF	Q14527	1009 aa	Known RBP eCLIP	7	□□□□□ -1.29
HNRNPU-208	ENST00000475997	COPS6	Q7L5N1	327 aa		7	□□□□□ -1.29
HNRNPU-208	ENST00000475997	RASEF	Q8IZ41	740 aa		7	□□□□□ -1.29
HNRNPU-208	ENST00000475997	LINS1	Q8NG48	757 aa		7	□□□□□ -1.29
HNRNPU-208	ENST00000475997	KLHDC4	Q8TBB5	520 aa		7	□□□□□ -1.29
HNRNPU-208	ENST00000475997	IBTK	Q9P2D0	1353 aa	Predicted RBP	7	□□□□□ -1.29
HNRNPU-208	ENST00000475997	PPP1R12B	O60237	982 aa	Predicted RBP	6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	NOLC1	Q14978	699 aa	Known RBP eCLIP	6.99	□□□□□ -1.29	2e-6	■■□□□ 13.7
HNRNPU-208	ENST00000475997	FKBP15	Q5T1M5	1219 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	CREB3L3	Q68CJ9	461 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	CCDC150	Q8NCX0	1101 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	PPFIBP2	Q8ND30	876 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	NUP133	Q8WUM0	1156 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	IP6K1	Q92551	441 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	DDX19A	Q9NUU7	478 aa	Known RBP	6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	STAP2	Q9UGK3	403 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	CEP131	Q9UPN4	1083 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	DEPDC5	O75140	1603 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	ARHGEF10	O15013	1369 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	KIF4A	O95239	1232 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	YEATS4	O95619	227 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	CAPN2	P17655	700 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	EIF4A1	P60842	406 aa	Known RBP	6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	XAGE3	Q8WTP9	111 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	STMN4	Q9H169	189 aa	Predicted RBP	6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	ZDHHC9	Q9Y397	364 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	FGFR1OP	O95684	399 aa	Known RBP	6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	DDIT3	P35638	169 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	CCT2	P78371	535 aa	Known RBP	6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	CCDC158	Q5M9N0	1113 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	CEP135	Q66GS9	1140 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	CCDC155	Q8N6L0	562 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	WASF1	Q92558	559 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	FAM227B	Q96M60	508 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	DACT1	Q9NYF0	836 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	RAI14	Q9P0K7	980 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997		A6NNZ2	444 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	NAA25	Q14CX7	972 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	TUBB8	Q3ZCM7	444 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	MAATS1	Q7Z4T9	603 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	SUDS3	Q9H7L9	328 aa	Predicted RBP	6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	FEZ2	Q9UHY8	353 aa	Predicted RBP	6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	EVA1C	P58658	441 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	CUL4A	Q13619	759 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	ANKRD13D	Q6ZTN6	518 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	FMNL3	Q8IVF7	1028 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	NEK1	Q96PY6	1258 aa		6.99	□□□□□ -1.29
HNRNPU-208	ENST00000475997	CAMSAP1	Q5T5Y3	1602 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	CPSF1	Q10570	1443 aa	Known RBP	6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	TACC1	O75410	805 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	FER	P16591	822 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	ZNF165	P49910	485 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	PTH1R	Q03431	593 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	RUFY3	Q7L099	469 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	CCDC50	Q8IVM0	306 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	BRF1	Q92994	677 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	SMC6	Q96SB8	1091 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	BICC1	Q9H694	974 aa	Known RBP	6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	BABAM1	Q9NWV8	329 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	OGFR	Q9NZT2	677 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	A2ML1	A8K2U0	1454 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	IGSF1	Q8N6C5	1336 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	GC	P02774	474 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	LMNTD2	Q8IXW0	634 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	CCDC110	Q8TBZ0	833 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	CEP126	Q9P2H0	1117 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	AOX1	Q06278	1338 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	NBPF11	Q86T75	865 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	C17orf53	Q8N3J3	647 aa	Predicted RBP	6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	ATRIP	Q8WXE1	791 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	TCHP	Q9BT92	498 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	HOMER2	Q9NSB8	354 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	USP6	P35125	1406 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	GOLIM4	O00461	696 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	RNMT	O43148	476 aa	Known RBP	6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	CLEC17A	Q6ZS10	378 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	NFATC2IP	Q8NCF5	419 aa		6.98	□□□□□ -1.29
HNRNPU-208	ENST00000475997	MROH1	Q8NDA8	1641 aa		6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	LACTB	P83111	547 aa	Predicted RBP	6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	CCDC178	Q5BJE1	867 aa		6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	KRT28	Q7Z3Y7	464 aa		6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	POTED	Q86YR6	584 aa		6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	CCDC114	Q96M63	670 aa		6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	GOPC	Q9HD26	462 aa		6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	USH1C	Q9Y6N9	552 aa		6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	HMGB1P1	B2RPK0	211 aa	Predicted RBP	6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	GABPB1	Q06547	395 aa	Predicted RBP	6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	BEND3	Q5T5X7	828 aa		6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	ZNF526	Q8TF50	670 aa	Predicted RBP	6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	SREK1	Q8WXA9	508 aa	Known RBP	6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	NEBL	O76041	1014 aa		6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	GRIPAP1	Q4V328	841 aa		6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	SH2D4B	Q5SQS7	431 aa		6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	SYTL4	Q96C24	671 aa	Predicted RBP	6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	SNRK	Q9NRH2	765 aa		6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997		U3KPZ7	1027 aa	Predicted RBP	6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	ZC3H13	Q5T200	1668 aa	Known RBP	6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	SLU7	O95391	586 aa	Known RBP	6.97	□□□□□ -1.29
HNRNPU-208	ENST00000475997	IFIT1	P09914	478 aa	Known RBP	6.97	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms