RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 CHRNDQ07001 517 aa14.48□□□□□ -0.09
CPNE1-222ENST00000473373 PAXIP1Q6ZW49 1069 aaPredicted RBP14.48□□□□□ -0.09
CPNE1-222ENST00000473373 HELBQ8NG08 1087 aaPredicted RBP14.48□□□□□ -0.09
CPNE1-222ENST00000473373 ABHD8Q96I13 439 aa14.48□□□□□ -0.09
CPNE1-222ENST00000473373 SUCLG2Q96I99 432 aa14.48□□□□□ -0.09
CPNE1-222ENST00000473373 ZNF594Q96JF6 807 aaPredicted RBP14.48□□□□□ -0.09
CPNE1-222ENST00000473373 MYH13Q9UKX3 1938 aa14.48□□□□□ -0.09
CPNE1-222ENST00000473373 NBPF7P0C2Y1 421 aaPredicted RBP14.47□□□□□ -0.09
CPNE1-222ENST00000473373 RPS12P25398 132 aaKnown RBP14.47□□□□□ -0.09
CPNE1-222ENST00000473373 MAP2K1Q02750 393 aaPredicted RBP14.47□□□□□ -0.09
CPNE1-222ENST00000473373 TRMT2AQ8IZ69 625 aaKnown RBP14.47□□□□□ -0.09
CPNE1-222ENST00000473373 FRAT1Q92837 279 aaPredicted RBP14.47□□□□□ -0.09
CPNE1-222ENST00000473373 KCNQ5Q9NR82 932 aa14.47□□□□□ -0.09
CPNE1-222ENST00000473373 USP17L3A6NCW0 530 aa14.46□□□□□ -0.09
CPNE1-222ENST00000473373 USP17L4A6NCW7 530 aa14.46□□□□□ -0.09
CPNE1-222ENST00000473373 TAF5LO75529 589 aa14.46□□□□□ -0.09
CPNE1-222ENST00000473373 UBTFL1P0CB47 393 aaPredicted RBP14.46□□□□□ -0.09
CPNE1-222ENST00000473373 TBC1D10BQ4KMP7 808 aaPredicted RBP14.46□□□□□ -0.09
CPNE1-222ENST00000473373 EPHA10Q5JZY3 1008 aa14.46□□□□□ -0.09
CPNE1-222ENST00000473373 USP17L1Q7RTZ2 530 aa14.46□□□□□ -0.09
CPNE1-222ENST00000473373 PODNQ7Z5L7 613 aa14.46□□□□□ -0.09
CPNE1-222ENST00000473373 DPF2Q92785 391 aa14.46□□□□□ -0.09
CPNE1-222ENST00000473373 BICC1Q9H694 974 aaKnown RBP14.46□□□□□ -0.09
CPNE1-222ENST00000473373 ZNF408Q9H9D4 720 aa14.46□□□□□ -0.09
CPNE1-222ENST00000473373 TRAF5O00463 557 aa14.45□□□□□ -0.1
CPNE1-222ENST00000473373 IPO8O15397 1037 aaKnown RBP14.45□□□□□ -0.1
CPNE1-222ENST00000473373 RARSP54136 660 aaKnown RBP14.45□□□□□ -0.1
CPNE1-222ENST00000473373 SAMD7Q7Z3H4 446 aa14.45□□□□□ -0.1
CPNE1-222ENST00000473373 COA1Q9GZY4 146 aa14.45□□□□□ -0.1
CPNE1-222ENST00000473373 HDAC5Q9UQL6 1122 aa14.45□□□□□ -0.1
CPNE1-222ENST00000473373 SHTN1A0MZ66 631 aa14.44□□□□□ -0.1
CPNE1-222ENST00000473373 KIF4BQ2VIQ3 1234 aa14.44□□□□□ -0.1
CPNE1-222ENST00000473373 CYP4F22Q6NT55 531 aa14.44□□□□□ -0.1
CPNE1-222ENST00000473373 RSBN1LQ6PCB5 846 aaPredicted RBP14.44□□□□□ -0.1
CPNE1-222ENST00000473373 ZNF804AQ7Z570 1209 aa14.44□□□□□ -0.1
CPNE1-222ENST00000473373 TRPM4Q8TD43 1214 aa14.44□□□□□ -0.1
CPNE1-222ENST00000473373 DCPSQ96C86 337 aaKnown RBP14.44□□□□□ -0.1
CPNE1-222ENST00000473373 CAPNS2Q96L46 248 aa14.44□□□□□ -0.1
CPNE1-222ENST00000473373 WTIPA6NIX2 430 aaPredicted RBP14.43□□□□□ -0.1
CPNE1-222ENST00000473373 VIL1P09327 827 aaKnown RBP14.43□□□□□ -0.1
CPNE1-222ENST00000473373 CST9Q5W186 159 aa14.43□□□□□ -0.1
CPNE1-222ENST00000473373 VPS37DQ86XT2 251 aa14.43□□□□□ -0.1
CPNE1-222ENST00000473373 OGFOD1Q8N543 542 aa14.43□□□□□ -0.1
CPNE1-222ENST00000473373 AGBL3Q8NEM8 1001 aa14.43□□□□□ -0.1
CPNE1-222ENST00000473373 BEGAINQ9BUH8 593 aa14.43□□□□□ -0.1
CPNE1-222ENST00000473373 TSKSQ9UJT2 592 aa14.43□□□□□ -0.1
CPNE1-222ENST00000473373 UTYO14607 1347 aa14.42□□□□□ -0.1
CPNE1-222ENST00000473373 CCDC85CA6NKD9 419 aa14.42□□□□□ -0.1
CPNE1-222ENST00000473373 METTL24Q5JXM2 366 aa14.42□□□□□ -0.1
CPNE1-222ENST00000473373 TTLL5Q6EMB2 1281 aa14.42□□□□□ -0.1
CPNE1-222ENST00000473373 GLIS2Q9BZE0 524 aaPredicted RBP14.42□□□□□ -0.1
CPNE1-222ENST00000473373 HDAC9Q9UKV0 1011 aa14.42□□□□□ -0.1
CPNE1-222ENST00000473373 MROH5Q6ZUA9 1318 aa14.41□□□□□ -0.1
CPNE1-222ENST00000473373 MYO3BQ8WXR4 1341 aa14.41□□□□□ -0.1
CPNE1-222ENST00000473373 AOC2O75106 756 aa14.41□□□□□ -0.1
CPNE1-222ENST00000473373 FRAT2O75474 233 aaPredicted RBP14.41□□□□□ -0.1
CPNE1-222ENST00000473373 USP17L8P0C7I0 530 aa14.41□□□□□ -0.1
CPNE1-222ENST00000473373 KLRK1P26718 216 aa14.41□□□□□ -0.1
CPNE1-222ENST00000473373 ECE1P42892 770 aa14.41□□□□□ -0.1
CPNE1-222ENST00000473373 GTF2IP78347 998 aa14.41□□□□□ -0.1
CPNE1-222ENST00000473373 CDC37L1Q7L3B6 337 aa14.41□□□□□ -0.1
CPNE1-222ENST00000473373 TXNRD3Q86VQ6 643 aa14.41□□□□□ -0.1
CPNE1-222ENST00000473373 ZC3H15Q8WU90 426 aaKnown RBP14.41□□□□□ -0.1
CPNE1-222ENST00000473373 USP44Q9H0E7 712 aa14.41□□□□□ -0.1
CPNE1-222ENST00000473373 ECM29Q5VYK3 1845 aa14.41□□□□□ -0.1
CPNE1-222ENST00000473373 SNAP23O00161 211 aa14.4□□□□□ -0.1
CPNE1-222ENST00000473373 CELF2O95319 508 aaKnown RBP14.4□□□□□ -0.1
CPNE1-222ENST00000473373 STRIP1Q5VSL9 837 aa14.4□□□□□ -0.1
CPNE1-222ENST00000473373 KRT26Q7Z3Y9 468 aa14.4□□□□□ -0.1
CPNE1-222ENST00000473373 USP48Q86UV5 1035 aa14.4□□□□□ -0.1
CPNE1-222ENST00000473373 SULF1Q8IWU6 871 aa14.4□□□□□ -0.1
CPNE1-222ENST00000473373 FTSJ3Q8IY81 847 aaKnown RBP14.4□□□□□ -0.1
CPNE1-222ENST00000473373 CLUAP1Q96AJ1 413 aa14.4□□□□□ -0.1
CPNE1-222ENST00000473373 PUS3Q9BZE2 481 aaKnown RBP14.4□□□□□ -0.1
CPNE1-222ENST00000473373 ZNF646O15015 1829 aaPredicted RBP14.4□□□□□ -0.1
CPNE1-222ENST00000473373 ZBED9Q6R2W3 1325 aa14.4□□□□□ -0.1
CPNE1-222ENST00000473373 BCAR3O75815 825 aa14.39□□□□□ -0.11
CPNE1-222ENST00000473373 HIRAP54198 1017 aaPredicted RBP14.39□□□□□ -0.11
CPNE1-222ENST00000473373 BRPF1P55201 1214 aaPredicted RBP14.39□□□□□ -0.11
CPNE1-222ENST00000473373 ARHGAP45Q92619 1136 aa14.39□□□□□ -0.11
CPNE1-222ENST00000473373 KAZALD1Q96I82 304 aa14.39□□□□□ -0.11
CPNE1-222ENST00000473373 MXD3Q9BW11 206 aa14.39□□□□□ -0.11
CPNE1-222ENST00000473373 CD209Q9NNX6 404 aa14.39□□□□□ -0.11
CPNE1-222ENST00000473373 MYOZ2Q9NPC6 264 aa14.39□□□□□ -0.11
CPNE1-222ENST00000473373 GGA3Q9NZ52 723 aa14.39□□□□□ -0.11
CPNE1-222ENST00000473373 LRRFIP2Q9Y608 721 aaKnown RBP14.39□□□□□ -0.11
CPNE1-222ENST00000473373 TLL2Q9Y6L7 1015 aa14.39□□□□□ -0.11
CPNE1-222ENST00000473373 GNAI3P08754 354 aa14.38□□□□□ -0.11
CPNE1-222ENST00000473373 KCNA4P22459 653 aa14.38□□□□□ -0.11
CPNE1-222ENST00000473373 UBE4AQ14139 1066 aa14.38□□□□□ -0.11
CPNE1-222ENST00000473373 RABL6Q3YEC7 729 aaPredicted RBP14.38□□□□□ -0.11
CPNE1-222ENST00000473373 LRRC24Q50LG9 513 aa14.38□□□□□ -0.11
CPNE1-222ENST00000473373 CAVIN4Q5BKX8 364 aa14.38□□□□□ -0.11
CPNE1-222ENST00000473373 ZKSCAN2Q63HK3 967 aa14.38□□□□□ -0.11
CPNE1-222ENST00000473373 ATF7IPQ6VMQ6 1270 aa14.38□□□□□ -0.11
CPNE1-222ENST00000473373 KIAA0825Q8IV33 1275 aa14.38□□□□□ -0.11
CPNE1-222ENST00000473373 ANKRD44Q8N8A2 993 aa14.38□□□□□ -0.11
CPNE1-222ENST00000473373 KLHDC4Q8TBB5 520 aa14.38□□□□□ -0.11
CPNE1-222ENST00000473373 SIL1Q9H173 461 aa14.38□□□□□ -0.11
CPNE1-222ENST00000473373 JAG2Q9Y219 1238 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms