RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 KIAA0232Q92628 1395 aa6.42□□□□□ -1.38
LRCH3-214ENST00000473177 CASZ1Q86V15 1759 aa6.41□□□□□ -1.38
LRCH3-214ENST00000473177 CDK2AP1O14519 115 aa6.41□□□□□ -1.38
LRCH3-214ENST00000473177 BMP1P13497 986 aa6.41□□□□□ -1.38
LRCH3-214ENST00000473177 WEE1P30291 646 aa6.41□□□□□ -1.38
LRCH3-214ENST00000473177 DEKP35659 375 aaKnown RBP6.41□□□□□ -1.38
LRCH3-214ENST00000473177 RNF144AP50876 292 aaPredicted RBP6.41□□□□□ -1.38
LRCH3-214ENST00000473177 SCARF1Q14162 830 aa6.41□□□□□ -1.38
LRCH3-214ENST00000473177 TLR1Q15399 786 aa6.41□□□□□ -1.38
LRCH3-214ENST00000473177 SLC15A2Q16348 729 aa6.41□□□□□ -1.38
LRCH3-214ENST00000473177 OCLNQ16625 522 aa6.41□□□□□ -1.38
LRCH3-214ENST00000473177 B4GALNT3Q6L9W6 998 aa6.41□□□□□ -1.38
LRCH3-214ENST00000473177 TRIM46Q7Z4K8 759 aa6.41□□□□□ -1.38
LRCH3-214ENST00000473177 TCP11L2Q8N4U5 519 aa6.41□□□□□ -1.38
LRCH3-214ENST00000473177 ZNF526Q8TF50 670 aaPredicted RBP6.41□□□□□ -1.38
LRCH3-214ENST00000473177 INSM2Q96T92 566 aaPredicted RBP6.41□□□□□ -1.38
LRCH3-214ENST00000473177 GMPR2Q9P2T1 348 aaKnown RBP6.41□□□□□ -1.38
LRCH3-214ENST00000473177 IQSEC3Q9UPP2 1182 aaPredicted RBP6.41□□□□□ -1.38
LRCH3-214ENST00000473177 ROCK1Q13464 1354 aa6.41□□□□□ -1.38
LRCH3-214ENST00000473177 MAP3K5Q99683 1374 aa6.41□□□□□ -1.38
LRCH3-214ENST00000473177 SSH2Q76I76 1423 aa6.41□□□□□ -1.38
LRCH3-214ENST00000473177 ATP10DQ9P241 1426 aa6.41□□□□□ -1.38
LRCH3-214ENST00000473177 BRD1O95696 1058 aa6.4□□□□□ -1.38
LRCH3-214ENST00000473177 IGFBP4P22692 258 aa6.4□□□□□ -1.38
LRCH3-214ENST00000473177 ATP2B4P23634 1241 aa6.4□□□□□ -1.38
LRCH3-214ENST00000473177 SSFA2P28290 1259 aa6.4□□□□□ -1.38
LRCH3-214ENST00000473177 CTSOP43234 321 aaPredicted RBP6.4□□□□□ -1.38
LRCH3-214ENST00000473177 ZC3H6P61129 1189 aaKnown RBP6.4□□□□□ -1.38
LRCH3-214ENST00000473177 SAFB2Q14151 953 aaKnown RBP eCLIP6.4□□□□□ -1.38
LRCH3-214ENST00000473177 C6orf118Q5T5N4 469 aa6.4□□□□□ -1.38
LRCH3-214ENST00000473177 TMEM132EQ6IEE7 984 aa6.4□□□□□ -1.38
LRCH3-214ENST00000473177 GAS2L2Q8NHY3 880 aa6.4□□□□□ -1.38
LRCH3-214ENST00000473177 CCDC136Q96JN2 1154 aa6.4□□□□□ -1.38
LRCH3-214ENST00000473177 PURBQ96QR8 312 aaKnown RBP6.4□□□□□ -1.38
LRCH3-214ENST00000473177 GRIP2Q9C0E4 1043 aa6.4□□□□□ -1.38
LRCH3-214ENST00000473177 THRAP3Q9Y2W1 955 aaKnown RBP6.4□□□□□ -1.38
LRCH3-214ENST00000473177 ABCC11Q96J66 1382 aa6.4□□□□□ -1.39
LRCH3-214ENST00000473177 SHANK3Q9BYB0 1731 aa6.39□□□□□ -1.39
LRCH3-214ENST00000473177 TCERG1O14776 1098 aaKnown RBP6.39□□□□□ -1.39
LRCH3-214ENST00000473177 C21orf2O43822 256 aa6.39□□□□□ -1.39
LRCH3-214ENST00000473177 GRIN3BO60391 1043 aa6.39□□□□□ -1.39
LRCH3-214ENST00000473177 PRMT3O60678 531 aa6.39□□□□□ -1.39
LRCH3-214ENST00000473177 POLD1P28340 1107 aa6.39□□□□□ -1.39
LRCH3-214ENST00000473177 FOXD4L5Q5VV16 416 aaPredicted RBP6.39□□□□□ -1.39
LRCH3-214ENST00000473177 ZNF295-AS1Q8N0V1 137 aa6.39□□□□□ -1.39
LRCH3-214ENST00000473177 NBPF15Q8N660 670 aa6.39□□□□□ -1.39
LRCH3-214ENST00000473177 NGDNQ8NEJ9 315 aaKnown RBP6.39□□□□□ -1.39
LRCH3-214ENST00000473177 C1orf216Q8TAB5 229 aa6.39□□□□□ -1.39
LRCH3-214ENST00000473177 ZFP42Q96MM3 310 aa6.39□□□□□ -1.39
LRCH3-214ENST00000473177 ZSCAN10Q96SZ4 725 aaPredicted RBP6.39□□□□□ -1.39
LRCH3-214ENST00000473177 TSPAN10Q9H1Z9 355 aaPredicted RBP6.39□□□□□ -1.39
LRCH3-214ENST00000473177 MRS2Q9HD23 443 aa6.39□□□□□ -1.39
LRCH3-214ENST00000473177 POLMQ9NP87 494 aaPredicted RBP6.39□□□□□ -1.39
LRCH3-214ENST00000473177 ATP13A2Q9NQ11 1180 aa6.39□□□□□ -1.39
LRCH3-214ENST00000473177 CXXC1Q9P0U4 656 aaPredicted RBP6.39□□□□□ -1.39
LRCH3-214ENST00000473177 ROCK2O75116 1388 aaKnown RBP6.39□□□□□ -1.39
LRCH3-214ENST00000473177 ANKARQ7Z5J8 1434 aa6.39□□□□□ -1.39
LRCH3-214ENST00000473177 TTLL8A6PVC2 850 aa6.38□□□□□ -1.39
LRCH3-214ENST00000473177 WFS1O76024 890 aa6.38□□□□□ -1.39
LRCH3-214ENST00000473177 PRELPP51888 382 aa6.38□□□□□ -1.39
LRCH3-214ENST00000473177 DDB1Q16531 1140 aa6.38□□□□□ -1.39
LRCH3-214ENST00000473177 TXNRD1Q16881 649 aa6.38□□□□□ -1.39
LRCH3-214ENST00000473177 SLC27A3Q5K4L6 730 aa6.38□□□□□ -1.39
LRCH3-214ENST00000473177 LCE2AQ5TA79 106 aaPredicted RBP6.38□□□□□ -1.39
LRCH3-214ENST00000473177 PHLDB3Q6NSJ2 640 aa6.38□□□□□ -1.39
LRCH3-214ENST00000473177 SLC9A9Q8IVB4 645 aa6.38□□□□□ -1.39
LRCH3-214ENST00000473177 STAG2Q8N3U4 1231 aa6.38□□□□□ -1.39
LRCH3-214ENST00000473177 KCTD17Q8N5Z5 321 aa6.38□□□□□ -1.39
LRCH3-214ENST00000473177 RNF217Q8TC41 542 aa6.38□□□□□ -1.39
LRCH3-214ENST00000473177 PRIMPOLQ96LW4 560 aa6.38□□□□□ -1.39
LRCH3-214ENST00000473177 POGKQ9P215 609 aa6.38□□□□□ -1.39
LRCH3-214ENST00000473177 DACH1Q9UI36 760 aa6.38□□□□□ -1.39
LRCH3-214ENST00000473177 USP3Q9Y6I4 520 aa6.38□□□□□ -1.39
LRCH3-214ENST00000473177 ADGRF5Q8IZF2 1346 aa6.38□□□□□ -1.39
LRCH3-214ENST00000473177 EIF3AQ14152 1382 aaKnown RBP6.38□□□□□ -1.39
LRCH3-214ENST00000473177 SMG6Q86US8 1419 aaKnown RBP6.38□□□□□ -1.39
LRCH3-214ENST00000473177 YTHDC2Q9H6S0 1430 aaKnown RBP6.38□□□□□ -1.39
LRCH3-214ENST00000473177 KIF1BO60333 1816 aa6.38□□□□□ -1.39
LRCH3-214ENST00000473177 CHD4Q14839 1912 aa6.37□□□□□ -1.39
LRCH3-214ENST00000473177 RGPD3A6NKT7 1758 aaPredicted RBP6.37□□□□□ -1.39
LRCH3-214ENST00000473177 RGPD4Q7Z3J3 1758 aa6.37□□□□□ -1.39
LRCH3-214ENST00000473177 LGR5O75473 907 aa6.37□□□□□ -1.39
LRCH3-214ENST00000473177 PSMA6P60900 246 aaKnown RBP6.37□□□□□ -1.39
LRCH3-214ENST00000473177 COL13A1Q5TAT6 717 aaPredicted RBP6.37□□□□□ -1.39
LRCH3-214ENST00000473177 TAS1R3Q7RTX0 852 aa6.37□□□□□ -1.39
LRCH3-214ENST00000473177 RHBDD1Q8TEB9 315 aa6.37□□□□□ -1.39
LRCH3-214ENST00000473177 SCG3Q8WXD2 468 aaKnown RBP6.37□□□□□ -1.39
LRCH3-214ENST00000473177 PRAM1Q96QH2 718 aa6.37□□□□□ -1.39
LRCH3-214ENST00000473177 PRKRIP1Q9H875 184 aaPredicted RBP6.37□□□□□ -1.39
LRCH3-214ENST00000473177 KNDC1Q76NI1 1749 aa6.36□□□□□ -1.39
LRCH3-214ENST00000473177 IFT172Q9UG01 1749 aa6.36□□□□□ -1.39
LRCH3-214ENST00000473177 ZBTB7CA1YPR0 619 aa6.36□□□□□ -1.39
LRCH3-214ENST00000473177 SPATA31C2B4DYI2 1134 aa6.36□□□□□ -1.39
LRCH3-214ENST00000473177 PATL2C9JE40 543 aaKnown RBP6.36□□□□□ -1.39
LRCH3-214ENST00000473177 PPP1R12BO60237 982 aaPredicted RBP6.36□□□□□ -1.39
LRCH3-214ENST00000473177 HSPA5P11021 654 aaKnown RBP6.36□□□□□ -1.39
LRCH3-214ENST00000473177 GTF2E1P29083 439 aaPredicted RBP6.36□□□□□ -1.39
LRCH3-214ENST00000473177 TEAD4Q15561 434 aa6.36□□□□□ -1.39
LRCH3-214ENST00000473177 RGL3Q3MIN7 710 aa6.36□□□□□ -1.39
LRCH3-214ENST00000473177 WDR44Q5JSH3 913 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms