RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 THEGQ9P2T0 379 aa9.15□□□□□ -0.94
HDAC3-206ENST00000471968 WDFY4Q6ZS81 3184 aa9.15□□□□□ -0.95
HDAC3-206ENST00000471968 ABCC4O15439 1325 aa9.14□□□□□ -0.95
HDAC3-206ENST00000471968 FAM86C2PA6NEL3 165 aa9.14□□□□□ -0.95
HDAC3-206ENST00000471968 ECE2O60344 883 aa9.14□□□□□ -0.95
HDAC3-206ENST00000471968 GJA5P36382 358 aa9.14□□□□□ -0.95
HDAC3-206ENST00000471968 MRPS5P82675 430 aaKnown RBP9.14□□□□□ -0.95
HDAC3-206ENST00000471968 HLFQ16534 295 aa9.14□□□□□ -0.95
HDAC3-206ENST00000471968 DOK7Q18PE1 504 aa9.14□□□□□ -0.95
HDAC3-206ENST00000471968 WASHC4Q2M389 1173 aa9.14□□□□□ -0.95
HDAC3-206ENST00000471968 SP8Q8IXZ3 490 aa9.14□□□□□ -0.95
HDAC3-206ENST00000471968 DEFB118Q96PH6 123 aa9.14□□□□□ -0.95
HDAC3-206ENST00000471968 SRRDQ9UH36 339 aa9.14□□□□□ -0.95
HDAC3-206ENST00000471968 TAF1P21675 1872 aa9.14□□□□□ -0.95
HDAC3-206ENST00000471968 UBR2Q8IWV8 1755 aa9.14□□□□□ -0.95
HDAC3-206ENST00000471968 CACNA1BQ00975 2339 aa9.14□□□□□ -0.95
HDAC3-206ENST00000471968 TESPA1A2RU30 521 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-206ENST00000471968 NBPF26B4DH59 902 aa9.13□□□□□ -0.95
HDAC3-206ENST00000471968 VIL1P09327 827 aaKnown RBP9.13□□□□□ -0.95
HDAC3-206ENST00000471968 NHLH1Q02575 133 aa9.13□□□□□ -0.95
HDAC3-206ENST00000471968 NBPF9Q3BBW0 867 aa9.13□□□□□ -0.95
HDAC3-206ENST00000471968 POLKQ9UBT6 870 aa9.13□□□□□ -0.95
HDAC3-206ENST00000471968 CHD8Q9HCK8 2581 aa9.13□□□□□ -0.95
HDAC3-206ENST00000471968 C5orf42Q9H799 3197 aa9.12□□□□□ -0.95
HDAC3-206ENST00000471968 KIF20BQ96Q89 1820 aa9.12□□□□□ -0.95
HDAC3-206ENST00000471968 DUOX1Q9NRD9 1551 aa9.12□□□□□ -0.95
HDAC3-206ENST00000471968 MYPNQ86TC9 1320 aa9.11□□□□□ -0.95
HDAC3-206ENST00000471968 BBOX1O75936 387 aa9.11□□□□□ -0.95
HDAC3-206ENST00000471968 OSBPP22059 807 aa9.11□□□□□ -0.95
HDAC3-206ENST00000471968 CTGFP29279 349 aa9.11□□□□□ -0.95
HDAC3-206ENST00000471968 C11orf16Q9NQ32 467 aa9.11□□□□□ -0.95
HDAC3-206ENST00000471968 GPR37L1O60883 481 aa9.1□□□□□ -0.95
HDAC3-206ENST00000471968 KRT37O76014 449 aa9.1□□□□□ -0.95
HDAC3-206ENST00000471968 USP17L8P0C7I0 530 aa9.1□□□□□ -0.95
HDAC3-206ENST00000471968 HOXD10P28358 340 aa9.1□□□□□ -0.95
HDAC3-206ENST00000471968 PSMC4P43686 418 aa9.1□□□□□ -0.95
HDAC3-206ENST00000471968 RSBN1LQ6PCB5 846 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-206ENST00000471968 ZNF790Q6PG37 636 aa9.1□□□□□ -0.95
HDAC3-206ENST00000471968 FAM43AQ8N2R8 423 aa9.1□□□□□ -0.95
HDAC3-206ENST00000471968 BRI3BPQ8WY22 251 aa9.1□□□□□ -0.95
HDAC3-206ENST00000471968 NECTIN2Q92692 538 aa9.1□□□□□ -0.95
HDAC3-206ENST00000471968 NLRP3Q96P20 1036 aa9.1□□□□□ -0.95
HDAC3-206ENST00000471968 LAMB1P07942 1786 aa9.09□□□□□ -0.95
HDAC3-206ENST00000471968 C6orf229H3BNL8 230 aa9.09□□□□□ -0.95
HDAC3-206ENST00000471968 TLR2O60603 784 aa9.09□□□□□ -0.95
HDAC3-206ENST00000471968 FMNL1O95466 1100 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-206ENST00000471968 CAPN2P17655 700 aa9.09□□□□□ -0.95
HDAC3-206ENST00000471968 MAP3K11Q16584 847 aa9.09□□□□□ -0.95
HDAC3-206ENST00000471968 SULT6B1Q6IMI4 303 aa9.09□□□□□ -0.95
HDAC3-206ENST00000471968 SLAIN1Q8ND83 568 aa9.09□□□□□ -0.95
HDAC3-206ENST00000471968 AGBL3Q8NEM8 1001 aa9.09□□□□□ -0.95
HDAC3-206ENST00000471968 NBPF3Q9H094 633 aa9.09□□□□□ -0.95
HDAC3-206ENST00000471968 CRISPLD2Q9H0B8 497 aa9.09□□□□□ -0.95
HDAC3-206ENST00000471968 CCL15-CCL14A0A0B4J2E2 113 aa9.08□□□□□ -0.96
HDAC3-206ENST00000471968 SMIM22K7EJ46 135 aa9.08□□□□□ -0.96
HDAC3-206ENST00000471968 WDHD1O75717 1129 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-206ENST00000471968 GPTP24298 496 aa9.08□□□□□ -0.96
HDAC3-206ENST00000471968 PRKCZQ05513 592 aa9.08□□□□□ -0.96
HDAC3-206ENST00000471968 GRIN2CQ14957 1233 aa9.08□□□□□ -0.96
HDAC3-206ENST00000471968 CCL15Q16663 113 aa9.08□□□□□ -0.96
HDAC3-206ENST00000471968 L3MBTL2Q969R5 705 aa9.08□□□□□ -0.96
HDAC3-206ENST00000471968 MS4A4AQ96JQ5 239 aa9.08□□□□□ -0.96
HDAC3-206ENST00000471968 FMNL2Q96PY5 1086 aa9.08□□□□□ -0.96
HDAC3-206ENST00000471968 NSFL1CQ9UNZ2 370 aaKnown RBP9.08□□□□□ -0.96
HDAC3-206ENST00000471968 USP16Q9Y5T5 823 aa9.08□□□□□ -0.96
HDAC3-206ENST00000471968 SPTBN4Q9H254 2564 aa9.07□□□□□ -0.96
HDAC3-206ENST00000471968 WNT10BO00744 389 aa9.07□□□□□ -0.96
HDAC3-206ENST00000471968 PPP1R12BO60237 982 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-206ENST00000471968 ST18O60284 1047 aa9.07□□□□□ -0.96
HDAC3-206ENST00000471968 SLC24A1O60721 1099 aa9.07□□□□□ -0.96
HDAC3-206ENST00000471968 INHAP05111 366 aa9.07□□□□□ -0.96
HDAC3-206ENST00000471968 SUSD4Q5VX71 490 aa9.07□□□□□ -0.96
HDAC3-206ENST00000471968 POTEEQ6S8J3 1075 aa9.07□□□□□ -0.96
HDAC3-206ENST00000471968 OPTNQ96CV9 577 aa9.07□□□□□ -0.96
HDAC3-206ENST00000471968 LBHD1Q9BQE6 289 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-206ENST00000471968 C11orf49Q9H6J7 331 aa9.07□□□□□ -0.96
HDAC3-206ENST00000471968 PAK6Q9NQU5 681 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-206ENST00000471968 EPG5Q9HCE0 2579 aa9.07□□□□□ -0.96
HDAC3-206ENST00000471968 UBN2Q6ZU65 1347 aa9.06□□□□□ -0.96
HDAC3-206ENST00000471968 ADGRA2Q96PE1 1338 aa9.06□□□□□ -0.96
HDAC3-206ENST00000471968 G3V3G9 751 aa9.06□□□□□ -0.96
HDAC3-206ENST00000471968 ELNP15502 786 aa9.06□□□□□ -0.96
HDAC3-206ENST00000471968 SMAD3P84022 425 aaKnown RBP9.06□□□□□ -0.96
HDAC3-206ENST00000471968 DCAF8Q5TAQ9 597 aa9.06□□□□□ -0.96
HDAC3-206ENST00000471968 PODNQ7Z5L7 613 aa9.06□□□□□ -0.96
HDAC3-206ENST00000471968 ANKLE1Q8NAG6 615 aa9.06□□□□□ -0.96
HDAC3-206ENST00000471968 CARD11Q9BXL7 1154 aa9.06□□□□□ -0.96
HDAC3-206ENST00000471968 ELP3Q9H9T3 547 aa9.06□□□□□ -0.96
HDAC3-206ENST00000471968 POLLQ9UGP5 575 aa9.06□□□□□ -0.96
HDAC3-206ENST00000471968 SCN9AQ15858 1988 aa9.05□□□□□ -0.96
HDAC3-206ENST00000471968 IBTKQ9P2D0 1353 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-206ENST00000471968 ADCY3O60266 1144 aa9.05□□□□□ -0.96
HDAC3-206ENST00000471968 SASH1O94885 1247 aa9.05□□□□□ -0.96
HDAC3-206ENST00000471968 NTSR2O95665 410 aa9.05□□□□□ -0.96
HDAC3-206ENST00000471968 BMP1P13497 986 aa9.05□□□□□ -0.96
HDAC3-206ENST00000471968 SHHQ15465 462 aa9.05□□□□□ -0.96
HDAC3-206ENST00000471968 APOBEC3FQ8IUX4 373 aaKnown RBP9.05□□□□□ -0.96
HDAC3-206ENST00000471968 HELBQ8NG08 1087 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-206ENST00000471968 GMLQ99445 158 aa9.05□□□□□ -0.96
HDAC3-206ENST00000471968 EYA3Q99504 573 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms