RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 EIF4A3P38919 411 aaKnown RBP5.35□□□□□ -1.55
HMGB1P25-201ENST00000468402 ZNF385CQ66K41 422 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P25-201ENST00000468402 NCAPG2Q86XI2 1143 aa5.35□□□□□ -1.55
HMGB1P25-201ENST00000468402 NEDD1Q8NHV4 660 aa5.35□□□□□ -1.55
HMGB1P25-201ENST00000468402 GAS2L1Q99501 681 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P25-201ENST00000468402 OXCT2Q9BYC2 517 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P25-201ENST00000468402 CHRDQ9H2X0 955 aa5.35□□□□□ -1.55
HMGB1P25-201ENST00000468402 RUBCNLQ9H714 662 aa5.35□□□□□ -1.55
HMGB1P25-201ENST00000468402 LATS2Q9NRM7 1088 aa5.35□□□□□ -1.55
HMGB1P25-201ENST00000468402 A0A1W2PP55 124 aa5.34□□□□□ -1.55
HMGB1P25-201ENST00000468402 CCDC85CA6NKD9 419 aa5.34□□□□□ -1.55
HMGB1P25-201ENST00000468402 CYP2E1P05181 493 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P25-201ENST00000468402 RLBP1P12271 317 aa5.34□□□□□ -1.55
HMGB1P25-201ENST00000468402 LMNB1P20700 586 aa5.34□□□□□ -1.55
HMGB1P25-201ENST00000468402 FAM160A1Q05DH4 1040 aa5.34□□□□□ -1.55
HMGB1P25-201ENST00000468402 TYRO3Q06418 890 aa5.34□□□□□ -1.55
HMGB1P25-201ENST00000468402 WDR44Q5JSH3 913 aa5.34□□□□□ -1.55
HMGB1P25-201ENST00000468402 TPTE2Q6XPS3 522 aa5.34□□□□□ -1.55
HMGB1P25-201ENST00000468402 CCDC155Q8N6L0 562 aa5.34□□□□□ -1.55
HMGB1P25-201ENST00000468402 ZNF296Q8WUU4 475 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P25-201ENST00000468402 ANAPC16Q96DE5 110 aa5.34□□□□□ -1.55
HMGB1P25-201ENST00000468402 TMEM74Q96NL1 305 aa5.34□□□□□ -1.55
HMGB1P25-201ENST00000468402 PNMA5Q96PV4 448 aa5.34□□□□□ -1.55
HMGB1P25-201ENST00000468402 SRPK1Q96SB4 655 aaKnown RBP5.34□□□□□ -1.55
HMGB1P25-201ENST00000468402 TRIM56Q9BRZ2 755 aaKnown RBP5.34□□□□□ -1.55
HMGB1P25-201ENST00000468402 ADAMTS1Q9UHI8 967 aa5.34□□□□□ -1.55
HMGB1P25-201ENST00000468402 TBX22Q9Y458 520 aa5.34□□□□□ -1.55
HMGB1P25-201ENST00000468402 SOS2Q07890 1332 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P25-201ENST00000468402 IBSPP21815 317 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P25-201ENST00000468402 TARSP26639 723 aaKnown RBP5.33□□□□□ -1.56
HMGB1P25-201ENST00000468402 SNAP47Q5SQN1 464 aa5.33□□□□□ -1.56
HMGB1P25-201ENST00000468402 KIAA0319Q5VV43 1072 aa5.33□□□□□ -1.56
HMGB1P25-201ENST00000468402 ZNF746Q6NUN9 644 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P25-201ENST00000468402 ANKS3Q6ZW76 656 aa5.33□□□□□ -1.56
HMGB1P25-201ENST00000468402 GPR161Q8N6U8 529 aaKnown RBP5.33□□□□□ -1.56
HMGB1P25-201ENST00000468402 RNF217Q8TC41 542 aa5.33□□□□□ -1.56
HMGB1P25-201ENST00000468402 RASGRP4Q8TDF6 673 aa5.33□□□□□ -1.56
HMGB1P25-201ENST00000468402 ZCCHC2Q9C0B9 1178 aaKnown RBP5.33□□□□□ -1.56
HMGB1P25-201ENST00000468402 ZNF408Q9H9D4 720 aa5.33□□□□□ -1.56
HMGB1P25-201ENST00000468402 LIN7BQ9HAP6 207 aa5.33□□□□□ -1.56
HMGB1P25-201ENST00000468402 GINM1Q9NU53 330 aa5.33□□□□□ -1.56
HMGB1P25-201ENST00000468402 KCNH4Q9UQ05 1017 aa5.33□□□□□ -1.56
HMGB1P25-201ENST00000468402 MRPL42Q9Y6G3 142 aaKnown RBP5.33□□□□□ -1.56
HMGB1P25-201ENST00000468402 TMEM238LA0A1B0GVL6 79 aa5.32□□□□□ -1.56
HMGB1P25-201ENST00000468402 EGFRP00533 1210 aa5.32□□□□□ -1.56
HMGB1P25-201ENST00000468402 RARAP10276 462 aa5.32□□□□□ -1.56
HMGB1P25-201ENST00000468402 XRCC5P13010 732 aaKnown RBP5.32□□□□□ -1.56
HMGB1P25-201ENST00000468402 ETFBP38117 255 aa5.32□□□□□ -1.56
HMGB1P25-201ENST00000468402 CHMP4BP1P59074 171 aa5.32□□□□□ -1.56
HMGB1P25-201ENST00000468402 KRT76Q01546 638 aa5.32□□□□□ -1.56
HMGB1P25-201ENST00000468402 EFHC2Q5JST6 749 aa5.32□□□□□ -1.56
HMGB1P25-201ENST00000468402 XP32Q5T750 250 aa5.32□□□□□ -1.56
HMGB1P25-201ENST00000468402 FBXW10Q5XX13 1052 aa5.32□□□□□ -1.56
HMGB1P25-201ENST00000468402 EGFLAMQ63HQ2 1017 aa5.32□□□□□ -1.56
HMGB1P25-201ENST00000468402 JAZF1Q86VZ6 243 aa5.32□□□□□ -1.56
HMGB1P25-201ENST00000468402 SUPT16HQ9Y5B9 1047 aaKnown RBP5.32□□□□□ -1.56
HMGB1P25-201ENST00000468402 hCG_2014768A0A024R1R8 64 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 MMP20O60882 483 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 F11P03951 625 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 PSAPP07602 524 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 GRNP28799 593 aaKnown RBP5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 GSK3AP49840 483 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 APOBRQ0VD83 1088 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 CCINQ13939 588 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 TCEAL1Q15170 157 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 RNF187Q5TA31 235 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 NBPF6Q5VWK0 638 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 FOXR1Q6PIV2 292 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 SV2BQ7L1I2 683 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 NLGN1Q8N2Q7 840 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 GOLM1Q8NBJ4 401 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 C3orf58Q8NDZ4 430 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 WHAMMQ8TF30 809 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 NKD1Q969G9 470 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 EAF1Q96JC9 268 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 SPACA7Q96KW9 195 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 NBPF4Q96M43 638 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 OSMRQ99650 979 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 CEP44Q9C0F1 390 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 ZFYVE1Q9HBF4 777 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 SIRPGQ9P1W8 387 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 STRIP2Q9ULQ0 834 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 PPM1HQ9ULR3 514 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 TLR6Q9Y2C9 796 aa5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P25-201ENST00000468402 KHNYNO15037 678 aaKnown RBP5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 ADAMTS2O95450 1211 aa5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 PF4P02776 101 aa5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 HSD3B2P26439 372 aa5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 MCM4P33991 863 aa5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 IGBP1P78318 339 aa5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 SFSWAPQ12872 951 aaKnown RBP5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 HYAL2Q12891 473 aa5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 RNFT1Q5M7Z0 435 aa5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 PEAR1Q5VY43 1037 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 DIEXFQ68CQ4 756 aaKnown RBP5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 FBXL19Q6PCT2 694 aa5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 RIPOR1Q6ZS17 1223 aa5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 GLIS3Q8NEA6 775 aa5.3□□□□□ -1.56
HMGB1P25-201ENST00000468402 OR13H1Q8NG92 308 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms