RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 LARP1Q6PKG0 1096 aaKnown RBP7.55□□□□□ -1.2
SIK3-207ENST00000465421 CNTROBQ8N137 903 aa7.55□□□□□ -1.2
SIK3-207ENST00000465421 GOLGA5Q8TBA6 731 aa7.55□□□□□ -1.2
SIK3-207ENST00000465421 ARFGEF2Q9Y6D5 1785 aa7.55□□□□□ -1.2
SIK3-207ENST00000465421 AHDC1Q5TGY3 1603 aaPredicted RBP7.55□□□□□ -1.2
SIK3-207ENST00000465421 GYS2P54840 703 aa7.55□□□□□ -1.2
SIK3-207ENST00000465421 RESTQ13127 1097 aa7.55□□□□□ -1.2
SIK3-207ENST00000465421 TSGA10IPQ3SY00 556 aa7.55□□□□□ -1.2
SIK3-207ENST00000465421 CCDC158Q5M9N0 1113 aa7.55□□□□□ -1.2
SIK3-207ENST00000465421 PRPF40BQ6NWY9 871 aaKnown RBP7.55□□□□□ -1.2
SIK3-207ENST00000465421 CC2D1AQ6P1N0 951 aaPredicted RBP7.55□□□□□ -1.2
SIK3-207ENST00000465421 CCDC191Q8NCU4 936 aa7.55□□□□□ -1.2
SIK3-207ENST00000465421 ARGLU1Q9NWB6 273 aaPredicted RBP7.55□□□□□ -1.2
SIK3-207ENST00000465421 WNK3Q9BYP7 1800 aa7.55□□□□□ -1.2
SIK3-207ENST00000465421 EFCAB8A8MWE9 144 aa7.55□□□□□ -1.2
SIK3-207ENST00000465421 AMPHP49418 695 aa7.55□□□□□ -1.2
SIK3-207ENST00000465421 NLRP6P59044 892 aa7.55□□□□□ -1.2
SIK3-207ENST00000465421 PSME1Q06323 249 aa7.55□□□□□ -1.2
SIK3-207ENST00000465421 USP44Q9H0E7 712 aa7.55□□□□□ -1.2
SIK3-207ENST00000465421 TSPYL4Q9UJ04 414 aa7.55□□□□□ -1.2
SIK3-207ENST00000465421 CTAGE5O15320 804 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 IFIT2P09913 472 aaKnown RBP7.54□□□□□ -1.2
SIK3-207ENST00000465421 ADD1P35611 737 aaKnown RBP7.54□□□□□ -1.2
SIK3-207ENST00000465421 TAF7Q15545 349 aaPredicted RBP7.54□□□□□ -1.2
SIK3-207ENST00000465421 CCDC30Q5VVM6 783 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 ICE2Q659A1 982 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 C10orf67Q8IYJ2 551 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 RHPN1Q8TCX5 695 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 MKL1Q969V6 931 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 EXOC4Q96A65 974 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 SURF6O75683 361 aaKnown RBP7.54□□□□□ -1.2
SIK3-207ENST00000465421 ETF1P62495 437 aaKnown RBP7.54□□□□□ -1.2
SIK3-207ENST00000465421 SMC1AQ14683 1233 aaKnown RBP7.54□□□□□ -1.2
SIK3-207ENST00000465421 ARHGEF25Q86VW2 580 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 ENGASEQ8NFI3 743 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 GOLPH3LQ9H4A5 285 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 SNRKQ9NRH2 765 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 RRP15Q9Y3B9 282 aaKnown RBP7.54□□□□□ -1.2
SIK3-207ENST00000465421 TJP1Q07157 1748 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 PLCH1Q4KWH8 1693 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 FLIIQ13045 1269 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 TOB2Q14106 344 aaPredicted RBP7.54□□□□□ -1.2
SIK3-207ENST00000465421 CCDC150Q8NCX0 1101 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 BICD2Q8TD16 824 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 UBXN4Q92575 508 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 PLCD4Q9BRC7 762 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 SRRTQ9BXP5 876 aaKnown RBP7.54□□□□□ -1.2
SIK3-207ENST00000465421 FUT8Q9BYC5 575 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 PARP3Q9Y6F1 533 aa7.54□□□□□ -1.2
SIK3-207ENST00000465421 TTC41PQ6P2S7 1318 aa7.53□□□□□ -1.2
SIK3-207ENST00000465421 TPM1P09493 284 aa7.53□□□□□ -1.2
SIK3-207ENST00000465421 TNNT3P45378 269 aaPredicted RBP7.53□□□□□ -1.2
SIK3-207ENST00000465421 GPS2Q13227 327 aa7.53□□□□□ -1.2
SIK3-207ENST00000465421 GORABQ5T7V8 394 aa7.53□□□□□ -1.2
SIK3-207ENST00000465421 CEP120Q8N960 986 aa7.53□□□□□ -1.2
SIK3-207ENST00000465421 CWC15Q9P013 229 aaKnown RBP7.53□□□□□ -1.2
SIK3-207ENST00000465421 ADAM21Q9UKJ8 722 aa7.53□□□□□ -1.2
SIK3-207ENST00000465421 COL15A1P39059 1388 aa7.53□□□□□ -1.2
SIK3-207ENST00000465421 EIF2S2P20042 333 aaKnown RBP7.53□□□□□ -1.2
SIK3-207ENST00000465421 AKAP4Q5JQC9 854 aa7.53□□□□□ -1.2
SIK3-207ENST00000465421 CREB3L3Q68CJ9 461 aa7.53□□□□□ -1.2
SIK3-207ENST00000465421 MAP4K1Q92918 833 aa7.53□□□□□ -1.2
SIK3-207ENST00000465421 LTV1Q96GA3 475 aaPredicted RBP7.53□□□□□ -1.2
SIK3-207ENST00000465421 BRMS1Q9HCU9 246 aa7.53□□□□□ -1.2
SIK3-207ENST00000465421 AFDNP55196 1824 aaKnown RBP7.53□□□□□ -1.2
SIK3-207ENST00000465421 COL22A1Q8NFW1 1626 aaPredicted RBP7.53□□□□□ -1.2
SIK3-207ENST00000465421 ZNF335Q9H4Z2 1342 aaPredicted RBP7.53□□□□□ -1.2
SIK3-207ENST00000465421 JCADQ9P266 1359 aa7.53□□□□□ -1.2
SIK3-207ENST00000465421 RPS6KA5O75582 802 aa7.53□□□□□ -1.2
SIK3-207ENST00000465421 LRRFIP1Q32MZ4 808 aaKnown RBP7.53□□□□□ -1.2
SIK3-207ENST00000465421 RSRC2Q7L4I2 434 aaKnown RBP7.53□□□□□ -1.2
SIK3-207ENST00000465421 ERCC4Q92889 916 aaPredicted RBP7.53□□□□□ -1.2
SIK3-207ENST00000465421 BPIFA3Q9BQP9 254 aa7.53□□□□□ -1.2
SIK3-207ENST00000465421 DNAI1Q9UI46 699 aa7.53□□□□□ -1.2
SIK3-207ENST00000465421 H3BQF6 201 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 MAP2K7O14733 419 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 GUCY2CP25092 1073 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 ACTN2P35609 894 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 EIF4A1P60842 406 aaKnown RBP7.52□□□□□ -1.21
SIK3-207ENST00000465421 AMOTQ4VCS5 1084 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 AOPEPQ8N6M6 819 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 ABTB2Q8N961 1025 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 ZNF622Q969S3 477 aaKnown RBP eCLIP7.52□□□□□ -1.216e-7■□□□□ 9.2
SIK3-207ENST00000465421 STK31Q9BXU1 1019 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 TMX1Q9H3N1 280 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 ANO10Q9NW15 660 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 RCOR1Q9UKL0 485 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 CPDO75976 1380 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 BECN2A8MW95 431 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 SLC27A2O14975 620 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 GTF2A1P52655 376 aaPredicted RBP7.52□□□□□ -1.21
SIK3-207ENST00000465421 NBPF20Q3BBV1 942 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 PPP1R42Q7Z4L9 355 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 PACS2Q86VP3 889 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 GPR161Q8N6U8 529 aaKnown RBP7.52□□□□□ -1.21
SIK3-207ENST00000465421 RUFY2Q8WXA3 655 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 DDX11Q96FC9 970 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 EPC1Q9H2F5 836 aa7.52□□□□□ -1.21
SIK3-207ENST00000465421 RBM8AQ9Y5S9 174 aaKnown RBP7.52□□□□□ -1.21
SIK3-207ENST00000465421 TNS3Q68CZ2 1445 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms