RNA–Protein interactions for RNA: ENST00000465030.1

SNX12-203, Transcript of sorting nexin 12, humanhuman

TSL 2

Gene SNX12, Length 946 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-203ENST00000465030 RSPH6AQ9H0K4 717 aa20.47■□□□□ 0.87
SNX12-203ENST00000465030 PODXL2Q9NZ53 605 aa20.47■□□□□ 0.87
SNX12-203ENST00000465030 STAP2Q9UGK3 403 aa20.47■□□□□ 0.87
SNX12-203ENST00000465030 COL4A1P02462 1669 aa20.47■□□□□ 0.87
SNX12-203ENST00000465030 PSME4Q14997 1843 aa20.46■□□□□ 0.87
SNX12-203ENST00000465030 USP17L3A6NCW0 530 aa20.46■□□□□ 0.87
SNX12-203ENST00000465030 USP17L4A6NCW7 530 aa20.46■□□□□ 0.87
SNX12-203ENST00000465030 UFL1O94874 794 aa20.46■□□□□ 0.87
SNX12-203ENST00000465030 MTFR1Q15390 333 aa20.46■□□□□ 0.87
SNX12-203ENST00000465030 USP17L1Q7RTZ2 530 aa20.46■□□□□ 0.87
SNX12-203ENST00000465030 APOBEC3FQ8IUX4 373 aaKnown RBP20.46■□□□□ 0.87
SNX12-203ENST00000465030 TESPA1A2RU30 521 aaPredicted RBP20.45■□□□□ 0.86
SNX12-203ENST00000465030 GJA5P36382 358 aa20.45■□□□□ 0.86
SNX12-203ENST00000465030 LRP10Q7Z4F1 713 aa20.45■□□□□ 0.86
SNX12-203ENST00000465030 PRUNE2Q8WUY3 3088 aa20.45■□□□□ 0.86
SNX12-203ENST00000465030 ZNF646O15015 1829 aaPredicted RBP20.45■□□□□ 0.86
SNX12-203ENST00000465030 SASH1O94885 1247 aa20.44■□□□□ 0.86
SNX12-203ENST00000465030 GJA8P48165 433 aa20.44■□□□□ 0.86
SNX12-203ENST00000465030 HSP90AB3PQ58FF7 597 aa20.44■□□□□ 0.86
SNX12-203ENST00000465030 OGFOD1Q8N543 542 aa20.44■□□□□ 0.86
SNX12-203ENST00000465030 UNCXA6NJT0 531 aa20.43■□□□□ 0.86
SNX12-203ENST00000465030 HTATSF1O43719 755 aaKnown RBP20.43■□□□□ 0.86
SNX12-203ENST00000465030 EIF4A1P60842 406 aaKnown RBP20.43■□□□□ 0.86
SNX12-203ENST00000465030 SF3B3Q15393 1217 aaKnown RBP20.43■□□□□ 0.86
SNX12-203ENST00000465030 THUMPD2Q9BTF0 503 aaKnown RBP20.43■□□□□ 0.86
SNX12-203ENST00000465030 GGA1Q9UJY5 639 aa20.43■□□□□ 0.86
SNX12-203ENST00000465030 LAMA2P24043 3122 aaKnown RBP20.42■□□□□ 0.86
SNX12-203ENST00000465030 COL1A1P02452 1464 aaPredicted RBP20.42■□□□□ 0.86
SNX12-203ENST00000465030 SSC5DA1L4H1 1573 aa20.42■□□□□ 0.86
SNX12-203ENST00000465030 PPP1R12BO60237 982 aaPredicted RBP20.41■□□□□ 0.86
SNX12-203ENST00000465030 EVI5O60447 810 aa20.41■□□□□ 0.86
SNX12-203ENST00000465030 COL9A1P20849 921 aa20.41■□□□□ 0.86
SNX12-203ENST00000465030 ARHGAP39Q9C0H5 1083 aa20.41■□□□□ 0.86
SNX12-203ENST00000465030 ZFYVE28Q9HCC9 887 aa20.41■□□□□ 0.86
SNX12-203ENST00000465030 ANKIB1Q9P2G1 1089 aa20.41■□□□□ 0.86
SNX12-203ENST00000465030 GJB1P08034 283 aa20.4■□□□□ 0.86
SNX12-203ENST00000465030 RPS8P62241 208 aaKnown RBP20.4■□□□□ 0.86
SNX12-203ENST00000465030 TAF1CQ15572 869 aaPredicted RBP20.4■□□□□ 0.86
SNX12-203ENST00000465030 PODNQ7Z5L7 613 aa20.4■□□□□ 0.86
SNX12-203ENST00000465030 FARP2O94887 1054 aaPredicted RBP20.39■□□□□ 0.85
SNX12-203ENST00000465030 BMP8BP34820 402 aa20.39■□□□□ 0.85
SNX12-203ENST00000465030 PDIA6Q15084 440 aa20.39■□□□□ 0.85
SNX12-203ENST00000465030 LRIT3Q3SXY7 679 aa20.39■□□□□ 0.85
SNX12-203ENST00000465030 PNISRQ8TF01 805 aaKnown RBP20.39■□□□□ 0.85
SNX12-203ENST00000465030 MXD3Q9BW11 206 aa20.39■□□□□ 0.85
SNX12-203ENST00000465030 DEFB129Q9H1M3 183 aa20.39■□□□□ 0.85
SNX12-203ENST00000465030 GNRH1P01148 92 aa20.38■□□□□ 0.85
SNX12-203ENST00000465030 PRMT2P55345 433 aa20.38■□□□□ 0.85
SNX12-203ENST00000465030 GDF15Q99988 308 aa20.38■□□□□ 0.85
SNX12-203ENST00000465030 LACTBP83111 547 aaPredicted RBP20.37■□□□□ 0.85
SNX12-203ENST00000465030 KIF22Q14807 665 aa20.37■□□□□ 0.85
SNX12-203ENST00000465030 DACT2Q5SW24 774 aa20.37■□□□□ 0.85
SNX12-203ENST00000465030 ZNF428Q96B54 188 aa20.37■□□□□ 0.85
SNX12-203ENST00000465030 MS4A4AQ96JQ5 239 aa20.37■□□□□ 0.85
SNX12-203ENST00000465030 RPTORQ8N122 1335 aa20.36■□□□□ 0.85
SNX12-203ENST00000465030 MYO3BQ8WXR4 1341 aa20.36■□□□□ 0.85
SNX12-203ENST00000465030 PROSER3Q2NL68 480 aa20.36■□□□□ 0.85
SNX12-203ENST00000465030 ZSWIM8A7E2V4 1837 aa20.35■□□□□ 0.85
SNX12-203ENST00000465030 CCL5P13501 91 aa20.35■□□□□ 0.85
SNX12-203ENST00000465030 MMP14P50281 582 aa20.35■□□□□ 0.85
SNX12-203ENST00000465030 BRI3BPQ8WY22 251 aa20.35■□□□□ 0.85
SNX12-203ENST00000465030 ANXA1P04083 346 aa20.34■□□□□ 0.85
SNX12-203ENST00000465030 IREB2P48200 963 aaKnown RBP20.34■□□□□ 0.85
SNX12-203ENST00000465030 BCAMP50895 628 aa20.34■□□□□ 0.85
SNX12-203ENST00000465030 CC2D1BQ5T0F9 858 aaKnown RBP20.34■□□□□ 0.85
SNX12-203ENST00000465030 FAM89AQ96GI7 184 aa20.34■□□□□ 0.85
SNX12-203ENST00000465030 ZBED3Q96IU2 234 aaPredicted RBP20.34■□□□□ 0.85
SNX12-203ENST00000465030 RNF208Q9H0X6 261 aa20.34■□□□□ 0.85
SNX12-203ENST00000465030 ANKRD13AQ8IZ07 590 aa20.33■□□□□ 0.85
SNX12-203ENST00000465030 U2AF1L4Q8WU68 220 aaKnown RBP20.33■□□□□ 0.85
SNX12-203ENST00000465030 OPTNQ96CV9 577 aa20.33■□□□□ 0.85
SNX12-203ENST00000465030 PPP2R3BQ9Y5P8 575 aa20.33■□□□□ 0.85
SNX12-203ENST00000465030 GRK4P32298 578 aa20.32■□□□□ 0.84
SNX12-203ENST00000465030 COPS6Q7L5N1 327 aa20.32■□□□□ 0.84
SNX12-203ENST00000465030 FAM43AQ8N2R8 423 aa20.32■□□□□ 0.84
SNX12-203ENST00000465030 CCL15-CCL14A0A0B4J2E2 113 aa20.31■□□□□ 0.84
SNX12-203ENST00000465030 TLR2O60603 784 aa20.31■□□□□ 0.84
SNX12-203ENST00000465030 PLA2G5P39877 138 aa20.31■□□□□ 0.84
SNX12-203ENST00000465030 AIMP1Q12904 312 aaKnown RBP20.31■□□□□ 0.84
SNX12-203ENST00000465030 CCL15Q16663 113 aa20.31■□□□□ 0.84
SNX12-203ENST00000465030 SUPT20HL1Q3ZLR7 823 aa20.31■□□□□ 0.84
SNX12-203ENST00000465030 STRIP1Q5VSL9 837 aa20.31■□□□□ 0.84
SNX12-203ENST00000465030 FBXW7Q969H0 707 aa20.31■□□□□ 0.84
SNX12-203ENST00000465030 XDHP47989 1333 aa20.3■□□□□ 0.84
SNX12-203ENST00000465030 USP2O75604 605 aaPredicted RBP20.3■□□□□ 0.84
SNX12-203ENST00000465030 XAGE3Q8WTP9 111 aa20.3■□□□□ 0.84
SNX12-203ENST00000465030 ELP3Q9H9T3 547 aa20.3■□□□□ 0.84
SNX12-203ENST00000465030 SEC31BQ9NQW1 1179 aa20.3■□□□□ 0.84
SNX12-203ENST00000465030 SRRDQ9UH36 339 aa20.3■□□□□ 0.84
SNX12-203ENST00000465030 RIPOR2Q9Y4F9 1068 aa20.3■□□□□ 0.84
SNX12-203ENST00000465030 WDHD1O75717 1129 aaPredicted RBP20.29■□□□□ 0.84
SNX12-203ENST00000465030 HSPA5P11021 654 aaKnown RBP20.29■□□□□ 0.84
SNX12-203ENST00000465030 EIF2S2P20042 333 aaKnown RBP20.29■□□□□ 0.84
SNX12-203ENST00000465030 TDHQ8IZJ6 230 aa20.29■□□□□ 0.84
SNX12-203ENST00000465030 RAET1EQ8TD07 263 aa20.29■□□□□ 0.84
SNX12-203ENST00000465030 GUCD1Q96NT3 240 aa20.29■□□□□ 0.84
SNX12-203ENST00000465030 RAPGEFL1Q9UHV5 662 aa20.29■□□□□ 0.84
SNX12-203ENST00000465030 ATP2B4P23634 1241 aa20.28■□□□□ 0.84
SNX12-203ENST00000465030 GTF2A2P52657 109 aa20.28■□□□□ 0.84
SNX12-203ENST00000465030 EIF4G2P78344 907 aaKnown RBP eCLIP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms