RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 HIP1O00291 1037 aa14.54□□□□□ -0.08
SEC61A1-203ENST00000464451 EAF2Q96CJ1 260 aaPredicted RBP14.54□□□□□ -0.08
SEC61A1-203ENST00000464451 ZDHHC9Q9Y397 364 aa14.54□□□□□ -0.08
SEC61A1-203ENST00000464451 SNX14Q9Y5W7 946 aa14.54□□□□□ -0.08
SEC61A1-203ENST00000464451 DDX49Q9Y6V7 483 aaKnown RBP14.54□□□□□ -0.08
SEC61A1-203ENST00000464451 BRCA1P38398 1863 aaKnown RBP14.54□□□□□ -0.08
SEC61A1-203ENST00000464451 CACNA1SQ13698 1873 aa14.54□□□□□ -0.08
SEC61A1-203ENST00000464451 PDE8AO60658 829 aa14.53□□□□□ -0.08
SEC61A1-203ENST00000464451 CASP7P55210 303 aa14.53□□□□□ -0.08
SEC61A1-203ENST00000464451 ARHGAP27Q6ZUM4 889 aa14.53□□□□□ -0.08
SEC61A1-203ENST00000464451 CNKSR1Q969H4 720 aa14.53□□□□□ -0.08
SEC61A1-203ENST00000464451 RBM17Q96I25 401 aaKnown RBP14.53□□□□□ -0.08
SEC61A1-203ENST00000464451 COPRSQ9NQ92 184 aa14.53□□□□□ -0.08
SEC61A1-203ENST00000464451 LAMB2P55268 1798 aa14.53□□□□□ -0.08
SEC61A1-203ENST00000464451 RIC1Q4ADV7 1423 aa14.53□□□□□ -0.08
SEC61A1-203ENST00000464451 CDHR2Q9BYE9 1310 aa14.53□□□□□ -0.08
SEC61A1-203ENST00000464451 GRPEL1Q9HAV7 217 aa14.52□□□□□ -0.08
SEC61A1-203ENST00000464451 SEC31BQ9NQW1 1179 aa14.52□□□□□ -0.08
SEC61A1-203ENST00000464451 RABL6Q3YEC7 729 aaPredicted RBP14.52□□□□□ -0.09
SEC61A1-203ENST00000464451 EPHA10Q5JZY3 1008 aa14.52□□□□□ -0.09
SEC61A1-203ENST00000464451 DDX46Q7L014 1031 aaKnown RBP14.52□□□□□ -0.09
SEC61A1-203ENST00000464451 SIL1Q9H173 461 aa14.52□□□□□ -0.09
SEC61A1-203ENST00000464451 LMBRD1Q9NUN5 540 aa14.52□□□□□ -0.09
SEC61A1-203ENST00000464451 SLX4Q8IY92 1834 aa14.51□□□□□ -0.09
SEC61A1-203ENST00000464451 BRD1O95696 1058 aa14.51□□□□□ -0.09
SEC61A1-203ENST00000464451 ALDH1B1P30837 517 aa14.51□□□□□ -0.09
SEC61A1-203ENST00000464451 HOXA10P31260 410 aaPredicted RBP14.51□□□□□ -0.09
SEC61A1-203ENST00000464451 CTSWP56202 376 aa14.51□□□□□ -0.09
SEC61A1-203ENST00000464451 SF3B3Q15393 1217 aaKnown RBP14.51□□□□□ -0.09
SEC61A1-203ENST00000464451 CCDC8Q9H0W5 538 aaPredicted RBP14.51□□□□□ -0.09
SEC61A1-203ENST00000464451 COL4A1P02462 1669 aa14.51□□□□□ -0.09
SEC61A1-203ENST00000464451 TAF1P21675 1872 aa14.51□□□□□ -0.09
SEC61A1-203ENST00000464451 NOL8Q76FK4 1167 aaKnown RBP14.5□□□□□ -0.09
SEC61A1-203ENST00000464451 RASEFQ8IZ41 740 aa14.5□□□□□ -0.09
SEC61A1-203ENST00000464451 CELF1Q92879 486 aaKnown RBP14.5□□□□□ -0.09
SEC61A1-203ENST00000464451 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.5□□□□□ -0.09
SEC61A1-203ENST00000464451 GRIN3BO60391 1043 aa14.5□□□□□ -0.09
SEC61A1-203ENST00000464451 TTLL11Q8NHH1 800 aa14.5□□□□□ -0.09
SEC61A1-203ENST00000464451 KLHDC4Q8TBB5 520 aa14.5□□□□□ -0.09
SEC61A1-203ENST00000464451 KCNB2Q92953 911 aa14.5□□□□□ -0.09
SEC61A1-203ENST00000464451 TTC14Q96N46 770 aa14.5□□□□□ -0.09
SEC61A1-203ENST00000464451 CRAMP1Q96RY5 1269 aa14.5□□□□□ -0.09
SEC61A1-203ENST00000464451 GREM2Q9H772 168 aa14.5□□□□□ -0.09
SEC61A1-203ENST00000464451 CHMP3Q9Y3E7 222 aa14.5□□□□□ -0.09
SEC61A1-203ENST00000464451 PPEF1O14829 653 aaPredicted RBP14.49□□□□□ -0.09
SEC61A1-203ENST00000464451 HSP90B1P14625 803 aaKnown RBP14.49□□□□□ -0.09
SEC61A1-203ENST00000464451 RFX5P48382 616 aaPredicted RBP14.49□□□□□ -0.09
SEC61A1-203ENST00000464451 FOXO4P98177 505 aa14.49□□□□□ -0.09
SEC61A1-203ENST00000464451 CCDC152Q4G0S7 254 aa14.49□□□□□ -0.09
SEC61A1-203ENST00000464451 RTN4Q9NQC3 1192 aaKnown RBP14.49□□□□□ -0.09
SEC61A1-203ENST00000464451 SNRKQ9NRH2 765 aa14.49□□□□□ -0.09
SEC61A1-203ENST00000464451 RASSF7Q02833 373 aa14.48□□□□□ -0.09
SEC61A1-203ENST00000464451 PTPN12Q05209 780 aaKnown RBP14.48□□□□□ -0.09
SEC61A1-203ENST00000464451 GRAPQ13588 217 aa14.48□□□□□ -0.09
SEC61A1-203ENST00000464451 FAM43AQ8N2R8 423 aa14.48□□□□□ -0.09
SEC61A1-203ENST00000464451 GRAPLQ8TC17 118 aaPredicted RBP14.48□□□□□ -0.09
SEC61A1-203ENST00000464451 TM6SF1Q9BZW5 370 aa14.48□□□□□ -0.09
SEC61A1-203ENST00000464451 TLR7Q9NYK1 1049 aaKnown RBP14.48□□□□□ -0.09
SEC61A1-203ENST00000464451 LIMCH1Q9UPQ0 1083 aa14.48□□□□□ -0.09
SEC61A1-203ENST00000464451 CCDC171Q6TFL3 1326 aa14.48□□□□□ -0.09
SEC61A1-203ENST00000464451 PRPF40AO75400 957 aaKnown RBP14.48□□□□□ -0.09
SEC61A1-203ENST00000464451 PTH1RQ03431 593 aa14.48□□□□□ -0.09
SEC61A1-203ENST00000464451 LMBR1LQ6UX01 489 aa14.48□□□□□ -0.09
SEC61A1-203ENST00000464451 GAS2L3Q86XJ1 694 aa14.48□□□□□ -0.09
SEC61A1-203ENST00000464451 C7orf43Q8WVR3 580 aa14.48□□□□□ -0.09
SEC61A1-203ENST00000464451 PANK2Q9BZ23 570 aa14.48□□□□□ -0.09
SEC61A1-203ENST00000464451 ZKSCAN1P17029 563 aaPredicted RBP14.47□□□□□ -0.09
SEC61A1-203ENST00000464451 CASTP20810 708 aaKnown RBP14.47□□□□□ -0.09
SEC61A1-203ENST00000464451 AK2P54819 239 aa14.47□□□□□ -0.09
SEC61A1-203ENST00000464451 NECTIN1Q15223 517 aa14.47□□□□□ -0.09
SEC61A1-203ENST00000464451 PLA2G12BQ9BX93 195 aa14.47□□□□□ -0.09
SEC61A1-203ENST00000464451 BOLA2Q9H3K6 86 aa14.47□□□□□ -0.09
SEC61A1-203ENST00000464451 ARFGEF1Q9Y6D6 1849 aa14.47□□□□□ -0.09
SEC61A1-203ENST00000464451 ATP5JP18859 108 aa14.46□□□□□ -0.09
SEC61A1-203ENST00000464451 NMIQ13287 307 aaPredicted RBP14.46□□□□□ -0.09
SEC61A1-203ENST00000464451 TNNI3KQ59H18 835 aa14.46□□□□□ -0.09
SEC61A1-203ENST00000464451 VPS53Q5VIR6 699 aa14.46□□□□□ -0.09
SEC61A1-203ENST00000464451 FSD1Q9BTV5 496 aa14.46□□□□□ -0.09
SEC61A1-203ENST00000464451 ZSWIM6Q9HCJ5 1215 aa14.46□□□□□ -0.09
SEC61A1-203ENST00000464451 FPGT-TNNI3KV9GXZ4 949 aa14.46□□□□□ -0.09
SEC61A1-203ENST00000464451 WDR33Q9C0J8 1336 aaKnown RBP14.46□□□□□ -0.09
SEC61A1-203ENST00000464451 CSF1RP07333 972 aa14.46□□□□□ -0.1
SEC61A1-203ENST00000464451 NCLP19338 710 aaKnown RBP14.46□□□□□ -0.1
SEC61A1-203ENST00000464451 ITGA6P23229 1130 aa14.46□□□□□ -0.1
SEC61A1-203ENST00000464451 ZNF445P59923 1031 aa14.46□□□□□ -0.1
SEC61A1-203ENST00000464451 RPS8P62241 208 aaKnown RBP14.46□□□□□ -0.1
SEC61A1-203ENST00000464451 TFCP2Q12800 502 aa14.46□□□□□ -0.1
SEC61A1-203ENST00000464451 RUFY3Q7L099 469 aa14.46□□□□□ -0.1
SEC61A1-203ENST00000464451 MAP4K1Q92918 833 aa14.46□□□□□ -0.1
SEC61A1-203ENST00000464451 FAM227BQ96M60 508 aa14.46□□□□□ -0.1
SEC61A1-203ENST00000464451 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.46□□□□□ -0.1
SEC61A1-203ENST00000464451 CYP46A1Q9Y6A2 500 aa14.46□□□□□ -0.1
SEC61A1-203ENST00000464451 NFKBIEO00221 500 aa14.45□□□□□ -0.1
SEC61A1-203ENST00000464451 BBOX1O75936 387 aa14.45□□□□□ -0.1
SEC61A1-203ENST00000464451 CCDC93Q567U6 631 aa14.45□□□□□ -0.1
SEC61A1-203ENST00000464451 CAVIN1Q6NZI2 390 aaKnown RBP14.45□□□□□ -0.1
SEC61A1-203ENST00000464451 JAKMIP1Q96N16 626 aaKnown RBP14.45□□□□□ -0.1
SEC61A1-203ENST00000464451 DBNLQ9UJU6 430 aaKnown RBP14.45□□□□□ -0.1
SEC61A1-203ENST00000464451 ATP6V0A2Q9Y487 856 aa14.45□□□□□ -0.1
SEC61A1-203ENST00000464451 KCNJ4P48050 445 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms