RNA–Protein interactions for RNA: ENST00000457408.6

TMED4-203, Transcript of transmembrane p24 trafficking protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED4, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-203ENST00000457408 FOXD4L6Q3SYB3 417 aaPredicted RBP24.47■■□□□ 1.51
TMED4-203ENST00000457408 FOXD4L3Q6VB84 417 aaPredicted RBP24.47■■□□□ 1.51
TMED4-203ENST00000457408 RTCBQ9Y3I0 505 aaKnown RBP24.47■■□□□ 1.51
TMED4-203ENST00000457408 RPAP1Q9BWH6 1393 aaPredicted RBP24.46■■□□□ 1.51
TMED4-203ENST00000457408 NECAB1Q8N987 351 aa24.46■■□□□ 1.51
TMED4-203ENST00000457408 A0A0G2JLW4 131 aa24.46■■□□□ 1.51
TMED4-203ENST00000457408 HSPD1P10809 573 aaKnown RBP24.46■■□□□ 1.51
TMED4-203ENST00000457408 RPS6KB1P23443 525 aa24.45■■□□□ 1.51
TMED4-203ENST00000457408 SETDB2Q96T68 719 aa24.45■■□□□ 1.51
TMED4-203ENST00000457408 NARFQ9UHQ1 456 aa24.45■■□□□ 1.51
TMED4-203ENST00000457408 CICQ96RK0 1608 aaPredicted RBP24.45■■□□□ 1.5
TMED4-203ENST00000457408 IDH1O75874 414 aaKnown RBP24.45■■□□□ 1.5
TMED4-203ENST00000457408 SLC5A1P13866 664 aa24.45■■□□□ 1.5
TMED4-203ENST00000457408 LRRFIP1Q32MZ4 808 aaKnown RBP24.45■■□□□ 1.5
TMED4-203ENST00000457408 RC3H1Q5TC82 1133 aaKnown RBP24.45■■□□□ 1.5
TMED4-203ENST00000457408 TPCN1Q9ULQ1 816 aa24.45■■□□□ 1.5
TMED4-203ENST00000457408 ME3Q16798 604 aa24.44■■□□□ 1.5
TMED4-203ENST00000457408 ARHGEF1Q92888 912 aaKnown RBP24.44■■□□□ 1.5
TMED4-203ENST00000457408 NEK1Q96PY6 1258 aa24.44■■□□□ 1.5
TMED4-203ENST00000457408 FGFR2P21802 821 aa24.44■■□□□ 1.5
TMED4-203ENST00000457408 PUS7LQ9H0K6 701 aaKnown RBP24.44■■□□□ 1.5
TMED4-203ENST00000457408 DDX60Q8IY21 1712 aaKnown RBP24.43■■□□□ 1.5
TMED4-203ENST00000457408 NBPF5PQ86XG9 351 aaPredicted RBP24.43■■□□□ 1.5
TMED4-203ENST00000457408 SMC3Q9UQE7 1217 aa24.43■■□□□ 1.5
TMED4-203ENST00000457408 CHRNDQ07001 517 aa24.43■■□□□ 1.5
TMED4-203ENST00000457408 KRT32Q14532 448 aa24.43■■□□□ 1.5
TMED4-203ENST00000457408 SLC9C2Q5TAH2 1124 aa24.43■■□□□ 1.5
TMED4-203ENST00000457408 TTLL5Q6EMB2 1281 aa24.43■■□□□ 1.5
TMED4-203ENST00000457408 LRRC2Q9BYS8 371 aa24.43■■□□□ 1.5
TMED4-203ENST00000457408 PIH1D3Q9NQM4 214 aaKnown RBP24.43■■□□□ 1.5
TMED4-203ENST00000457408 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.43■■□□□ 1.5
TMED4-203ENST00000457408 NPHP1O15259 732 aa24.42■■□□□ 1.5
TMED4-203ENST00000457408 STK3Q13188 491 aa24.42■■□□□ 1.5
TMED4-203ENST00000457408 TSGA10IPQ3SY00 556 aa24.42■■□□□ 1.5
TMED4-203ENST00000457408 DSCC1Q9BVC3 393 aa24.42■■□□□ 1.5
TMED4-203ENST00000457408 CLEC17AQ6ZS10 378 aa24.41■■□□□ 1.5
TMED4-203ENST00000457408 ZSCAN31Q96LW9 406 aaPredicted RBP24.41■■□□□ 1.5
TMED4-203ENST00000457408 CDC5LQ99459 802 aaKnown RBP24.41■■□□□ 1.5
TMED4-203ENST00000457408 ONECUT3O60422 494 aaPredicted RBP24.41■■□□□ 1.5
TMED4-203ENST00000457408 BRD1O95696 1058 aa24.41■■□□□ 1.5
TMED4-203ENST00000457408 ZFYP08048 801 aaPredicted RBP24.41■■□□□ 1.5
TMED4-203ENST00000457408 BCAMP50895 628 aa24.41■■□□□ 1.5
TMED4-203ENST00000457408 FAM196AQ6ZSG2 479 aa24.41■■□□□ 1.5
TMED4-203ENST00000457408 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.41■■□□□ 1.5
TMED4-203ENST00000457408 NHSQ6T4R5 1651 aa24.41■■□□□ 1.5
TMED4-203ENST00000457408 WTIPA6NIX2 430 aaPredicted RBP24.4■■□□□ 1.5
TMED4-203ENST00000457408 STOX1Q6ZVD7 989 aa24.4■■□□□ 1.5
TMED4-203ENST00000457408 ANKRD18AQ8IVF6 992 aa24.4■■□□□ 1.5
TMED4-203ENST00000457408 ATRNO75882 1429 aa24.4■■□□□ 1.5
TMED4-203ENST00000457408 UQCRFS1P1P0C7P4 283 aa24.4■■□□□ 1.5
TMED4-203ENST00000457408 RFC4P35249 363 aa24.4■■□□□ 1.5
TMED4-203ENST00000457408 TOB2Q14106 344 aaPredicted RBP24.4■■□□□ 1.5
TMED4-203ENST00000457408 IQSEC3Q9UPP2 1182 aaPredicted RBP24.4■■□□□ 1.5
TMED4-203ENST00000457408 SPEF2Q9C093 1822 aa24.4■■□□□ 1.5
TMED4-203ENST00000457408 BCORQ6W2J9 1755 aa24.4■■□□□ 1.5
TMED4-203ENST00000457408 ABCC12Q96J65 1359 aa24.39■■□□□ 1.5
TMED4-203ENST00000457408 FGD1P98174 961 aa24.39■■□□□ 1.5
TMED4-203ENST00000457408 APPBP2Q92624 585 aa24.39■■□□□ 1.5
TMED4-203ENST00000457408 SH2B1Q9NRF2 756 aaPredicted RBP24.39■■□□□ 1.5
TMED4-203ENST00000457408 LRRC4BQ9NT99 713 aa24.39■■□□□ 1.5
TMED4-203ENST00000457408 NCLP19338 710 aaKnown RBP24.39■■□□□ 1.49
TMED4-203ENST00000457408 ARID4AP29374 1257 aaPredicted RBP24.39■■□□□ 1.49
TMED4-203ENST00000457408 HAND2P61296 217 aa24.39■■□□□ 1.49
TMED4-203ENST00000457408 SPATA5Q8NB90 893 aa24.39■■□□□ 1.49
TMED4-203ENST00000457408 ZNF831Q5JPB2 1677 aa24.38■■□□□ 1.49
TMED4-203ENST00000457408 PRPF40AO75400 957 aaKnown RBP24.38■■□□□ 1.49
TMED4-203ENST00000457408 GJB2P29033 226 aa24.38■■□□□ 1.49
TMED4-203ENST00000457408 RASGRF1Q13972 1273 aa24.38■■□□□ 1.49
TMED4-203ENST00000457408 TTF1Q15361 905 aaPredicted RBP24.38■■□□□ 1.49
TMED4-203ENST00000457408 TRAPPC3LQ5T215 181 aa24.38■■□□□ 1.49
TMED4-203ENST00000457408 Q6ZUG5 572 aa24.38■■□□□ 1.49
TMED4-203ENST00000457408 ZNF512BQ96KM6 892 aaPredicted RBP24.38■■□□□ 1.49
TMED4-203ENST00000457408 COL4A1P02462 1669 aa24.38■■□□□ 1.49
TMED4-203ENST00000457408 ST3GAL1Q11201 340 aa24.38■■□□□ 1.49
TMED4-203ENST00000457408 ANKRD1Q15327 319 aa24.38■■□□□ 1.49
TMED4-203ENST00000457408 TICAM2Q86XR7 235 aa24.38■■□□□ 1.49
TMED4-203ENST00000457408 DDX49Q9Y6V7 483 aaKnown RBP24.38■■□□□ 1.49
TMED4-203ENST00000457408 CELF1Q92879 486 aaKnown RBP24.37■■□□□ 1.49
TMED4-203ENST00000457408 BCL11BQ9C0K0 894 aaPredicted RBP24.37■■□□□ 1.49
TMED4-203ENST00000457408 WWC3Q9ULE0 1092 aa24.37■■□□□ 1.49
TMED4-203ENST00000457408 TAF1P21675 1872 aa24.37■■□□□ 1.49
TMED4-203ENST00000457408 GPAA1O43292 621 aa24.36■■□□□ 1.49
TMED4-203ENST00000457408 NYXQ9GZU5 481 aa24.36■■□□□ 1.49
TMED4-203ENST00000457408 RTL9Q8NET4 1388 aa24.36■■□□□ 1.49
TMED4-203ENST00000457408 AKAP11Q9UKA4 1901 aa24.36■■□□□ 1.49
TMED4-203ENST00000457408 SF3B3Q15393 1217 aaKnown RBP24.36■■□□□ 1.49
TMED4-203ENST00000457408 ZSCAN25Q6NSZ9 544 aa24.36■■□□□ 1.49
TMED4-203ENST00000457408 CHST3Q7LGC8 479 aa24.36■■□□□ 1.49
TMED4-203ENST00000457408 NLRP3Q96P20 1036 aa24.36■■□□□ 1.49
TMED4-203ENST00000457408 ZNF532Q9HCE3 1301 aa24.36■■□□□ 1.49
TMED4-203ENST00000457408 E7EWF7 191 aa24.35■■□□□ 1.49
TMED4-203ENST00000457408 TRIM37O94972 964 aa24.35■■□□□ 1.49
TMED4-203ENST00000457408 PTMSP20962 102 aa24.35■■□□□ 1.49
TMED4-203ENST00000457408 ADD2P35612 726 aa24.35■■□□□ 1.49
TMED4-203ENST00000457408 SKOR2Q2VWA4 1001 aaPredicted RBP24.35■■□□□ 1.49
TMED4-203ENST00000457408 TPTE2Q6XPS3 522 aa24.35■■□□□ 1.49
TMED4-203ENST00000457408 LRP5O75197 1615 aa24.35■■□□□ 1.49
TMED4-203ENST00000457408 SYT1P21579 422 aa24.35■■□□□ 1.49
TMED4-203ENST00000457408 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.35■■□□□ 1.49
TMED4-203ENST00000457408 WDR33Q9C0J8 1336 aaKnown RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms