RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 MX2P20592 715 aa9.4□□□□□ -0.9
COMMD3-204ENST00000456711 GPKOWQ92917 476 aaPredicted RBP eCLIP9.4□□□□□ -0.9
COMMD3-204ENST00000456711 ARHGAP9Q9BRR9 750 aa9.4□□□□□ -0.9
COMMD3-204ENST00000456711 CCDC7Q96M83 1385 aa9.39□□□□□ -0.91
COMMD3-204ENST00000456711 GRIN2CQ14957 1233 aa9.39□□□□□ -0.91
COMMD3-204ENST00000456711 AMHR2Q16671 573 aa9.39□□□□□ -0.91
COMMD3-204ENST00000456711 RGL3Q3MIN7 710 aa9.39□□□□□ -0.91
COMMD3-204ENST00000456711 SEMA6BQ9H3T3 888 aa9.39□□□□□ -0.91
COMMD3-204ENST00000456711 LIMD1Q9UGP4 676 aa9.39□□□□□ -0.91
COMMD3-204ENST00000456711 BCS1LQ9Y276 419 aa9.39□□□□□ -0.91
COMMD3-204ENST00000456711 RGPD5Q99666 1765 aa9.39□□□□□ -0.91
COMMD3-204ENST00000456711 PPIP5K1Q6PFW1 1433 aa9.39□□□□□ -0.91
COMMD3-204ENST00000456711 ACEP12821 1306 aa9.38□□□□□ -0.91
COMMD3-204ENST00000456711 DIXDC1Q155Q3 683 aa9.38□□□□□ -0.91
COMMD3-204ENST00000456711 ZMYM1Q5SVZ6 1142 aa9.38□□□□□ -0.91
COMMD3-204ENST00000456711 ALYREFQ86V81 257 aaKnown RBP9.38□□□□□ -0.91
COMMD3-204ENST00000456711 CD163Q86VB7 1156 aa9.38□□□□□ -0.91
COMMD3-204ENST00000456711 NUDT16Q96DE0 195 aaKnown RBP9.38□□□□□ -0.91
COMMD3-204ENST00000456711 OCSTAMPQ9BR26 566 aa9.38□□□□□ -0.91
COMMD3-204ENST00000456711 OXCT2Q9BYC2 517 aaPredicted RBP9.38□□□□□ -0.91
COMMD3-204ENST00000456711 CDV3Q9UKY7 258 aaKnown RBP9.38□□□□□ -0.91
COMMD3-204ENST00000456711 USP54Q70EL1 1684 aa9.38□□□□□ -0.91
COMMD3-204ENST00000456711 QRICH2Q9H0J4 1663 aa9.38□□□□□ -0.91
COMMD3-204ENST00000456711 PDE4DIPQ5VU43 2346 aa9.38□□□□□ -0.91
COMMD3-204ENST00000456711 KIAA1551Q9HCM1 1747 aa9.37□□□□□ -0.91
COMMD3-204ENST00000456711 CSB-PGBD3P0DP91 1061 aa9.37□□□□□ -0.91
COMMD3-204ENST00000456711 HSPA8P11142 646 aaKnown RBP9.37□□□□□ -0.91
COMMD3-204ENST00000456711 RNF144AP50876 292 aaPredicted RBP9.37□□□□□ -0.91
COMMD3-204ENST00000456711 RAB15P59190 212 aa9.37□□□□□ -0.91
COMMD3-204ENST00000456711 CFAP70Q5T0N1 1121 aa9.37□□□□□ -0.91
COMMD3-204ENST00000456711 FLAD1Q8NFF5 587 aa9.37□□□□□ -0.91
COMMD3-204ENST00000456711 CCNL1Q9UK58 526 aaPredicted RBP9.37□□□□□ -0.91
COMMD3-204ENST00000456711 SPATA31E1Q6ZUB1 1445 aa9.37□□□□□ -0.91
COMMD3-204ENST00000456711 CNTNAP1P78357 1384 aa9.37□□□□□ -0.91
COMMD3-204ENST00000456711 SLIT3O75094 1523 aa9.36□□□□□ -0.91
COMMD3-204ENST00000456711 KRTAP4-8A0A0G2JLE6 195 aa9.36□□□□□ -0.91
COMMD3-204ENST00000456711 VEGFAP15692 232 aaPredicted RBP9.36□□□□□ -0.91
COMMD3-204ENST00000456711 HOXB4P17483 251 aaPredicted RBP9.36□□□□□ -0.91
COMMD3-204ENST00000456711 RTL5Q5HYW3 569 aaPredicted RBP9.36□□□□□ -0.91
COMMD3-204ENST00000456711 PDXDC2PQ6P474 469 aa9.36□□□□□ -0.91
COMMD3-204ENST00000456711 TRERF1Q96PN7 1200 aa9.36□□□□□ -0.91
COMMD3-204ENST00000456711 N4BP2Q86UW6 1770 aaPredicted RBP9.36□□□□□ -0.91
COMMD3-204ENST00000456711 VIRMAQ69YN4 1812 aaKnown RBP9.35□□□□□ -0.91
COMMD3-204ENST00000456711 KIF13BQ9NQT8 1826 aa9.35□□□□□ -0.91
COMMD3-204ENST00000456711 LILRB3O75022 631 aa9.35□□□□□ -0.91
COMMD3-204ENST00000456711 CHRNA4P43681 627 aa9.35□□□□□ -0.91
COMMD3-204ENST00000456711 LINC00114Q6XXX2 140 aa9.35□□□□□ -0.91
COMMD3-204ENST00000456711 GAS2L1Q99501 681 aaPredicted RBP9.35□□□□□ -0.91
COMMD3-204ENST00000456711 RNF181Q9P0P0 153 aa9.35□□□□□ -0.91
COMMD3-204ENST00000456711 CPSF1Q10570 1443 aaKnown RBP9.34□□□□□ -0.91
COMMD3-204ENST00000456711 TGFB2P61812 414 aa9.34□□□□□ -0.91
COMMD3-204ENST00000456711 DOC2BQ14184 412 aa9.34□□□□□ -0.91
COMMD3-204ENST00000456711 FOXD4L6Q3SYB3 417 aaPredicted RBP9.34□□□□□ -0.91
COMMD3-204ENST00000456711 FOXD4L3Q6VB84 417 aaPredicted RBP9.34□□□□□ -0.91
COMMD3-204ENST00000456711 ZBTB33Q86T24 672 aa9.34□□□□□ -0.91
COMMD3-204ENST00000456711 KRTAP19-1Q8IUB9 90 aa9.34□□□□□ -0.91
COMMD3-204ENST00000456711 C5P01031 1676 aa9.34□□□□□ -0.91
COMMD3-204ENST00000456711 ARFGEF1Q9Y6D6 1849 aa9.33□□□□□ -0.92
COMMD3-204ENST00000456711 ERVH48-1M5A8F1 160 aa9.33□□□□□ -0.92
COMMD3-204ENST00000456711 NSFL1CQ9UNZ2 370 aaKnown RBP9.33□□□□□ -0.92
COMMD3-204ENST00000456711 TRAK1Q9UPV9 953 aa9.33□□□□□ -0.92
COMMD3-204ENST00000456711 DYRK1BQ9Y463 629 aa9.33□□□□□ -0.92
COMMD3-204ENST00000456711 BRCA1P38398 1863 aaKnown RBP9.33□□□□□ -0.92
COMMD3-204ENST00000456711 A0A0G2JLW4 131 aa9.32□□□□□ -0.92
COMMD3-204ENST00000456711 H7C1W4 665 aa9.32□□□□□ -0.92
COMMD3-204ENST00000456711 IL2RBP14784 551 aa9.32□□□□□ -0.92
COMMD3-204ENST00000456711 ARHGEF25Q86VW2 580 aa9.32□□□□□ -0.92
COMMD3-204ENST00000456711 HELBQ8NG08 1087 aaPredicted RBP9.32□□□□□ -0.92
COMMD3-204ENST00000456711 SYTL4Q96C24 671 aaPredicted RBP9.32□□□□□ -0.92
COMMD3-204ENST00000456711 SBF1O95248 1867 aa9.32□□□□□ -0.92
COMMD3-204ENST00000456711 BTBD11A6QL63 1104 aa9.31□□□□□ -0.92
COMMD3-204ENST00000456711 TULP1O00294 542 aaPredicted RBP9.31□□□□□ -0.92
COMMD3-204ENST00000456711 NSD2O96028 1365 aa9.31□□□□□ -0.92
COMMD3-204ENST00000456711 ANKRD36BQ8N2N9 1353 aa9.31□□□□□ -0.92
COMMD3-204ENST00000456711 DOT1LQ8TEK3 1739 aa9.31□□□□□ -0.92
COMMD3-204ENST00000456711 ZC3H4Q9UPT8 1303 aaKnown RBP9.31□□□□□ -0.92
COMMD3-204ENST00000456711 ADGRB1O14514 1584 aa9.3□□□□□ -0.92
COMMD3-204ENST00000456711 GLTPD2A6NH11 291 aa9.3□□□□□ -0.92
COMMD3-204ENST00000456711 THBS1P07996 1170 aa9.3□□□□□ -0.92
COMMD3-204ENST00000456711 HMGB2P26583 209 aaKnown RBP9.3□□□□□ -0.92
COMMD3-204ENST00000456711 POU4F2Q12837 409 aa9.3□□□□□ -0.92
COMMD3-204ENST00000456711 SMIM5Q71RC9 77 aa9.3□□□□□ -0.92
COMMD3-204ENST00000456711 PARP9Q8IXQ6 854 aa9.3□□□□□ -0.92
COMMD3-204ENST00000456711 EDARADDQ8WWZ3 215 aa9.3□□□□□ -0.92
COMMD3-204ENST00000456711 FKBPLQ9UIM3 349 aa9.3□□□□□ -0.92
COMMD3-204ENST00000456711 TAF1LQ8IZX4 1826 aa9.3□□□□□ -0.92
COMMD3-204ENST00000456711 TOGARAM1Q9Y4F4 1720 aa9.29□□□□□ -0.92
COMMD3-204ENST00000456711 ITGAEP38570 1179 aa9.29□□□□□ -0.92
COMMD3-204ENST00000456711 MAP2K3P46734 347 aa9.29□□□□□ -0.92
COMMD3-204ENST00000456711 MAP2K1Q02750 393 aaPredicted RBP9.29□□□□□ -0.92
COMMD3-204ENST00000456711 USP47Q96K76 1375 aa9.28□□□□□ -0.92
COMMD3-204ENST00000456711 DPEP1P16444 411 aa9.28□□□□□ -0.92
COMMD3-204ENST00000456711 MYSM1Q5VVJ2 828 aa9.28□□□□□ -0.92
COMMD3-204ENST00000456711 ADAM32Q8TC27 787 aa9.28□□□□□ -0.92
COMMD3-204ENST00000456711 DDX54Q8TDD1 881 aaKnown RBP9.28□□□□□ -0.92
COMMD3-204ENST00000456711 CDK19Q9BWU1 502 aa9.28□□□□□ -0.92
COMMD3-204ENST00000456711 UBR3Q6ZT12 1888 aa9.28□□□□□ -0.92
COMMD3-204ENST00000456711 CTDSPL2Q05D32 466 aa9.27□□□□□ -0.93
COMMD3-204ENST00000456711 AMIGO3Q86WK7 504 aa9.27□□□□□ -0.93
COMMD3-204ENST00000456711 MCOLN1Q9GZU1 580 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms