RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 STK26Q9P289 416 aa21.53■■□□□ 1.04
PTPA-223ENST00000452489 H3BQV1 296 aa21.52■■□□□ 1.04
PTPA-223ENST00000452489 FANCCQ00597 558 aa21.52■■□□□ 1.04
PTPA-223ENST00000452489 IFFO2Q5TF58 517 aa21.52■■□□□ 1.04
PTPA-223ENST00000452489 RBM8AQ9Y5S9 174 aaKnown RBP21.52■■□□□ 1.04
PTPA-223ENST00000452489 TAF6LQ9Y6J9 622 aa21.52■■□□□ 1.04
PTPA-223ENST00000452489 SOS1Q07889 1333 aaPredicted RBP21.52■■□□□ 1.04
PTPA-223ENST00000452489 ADGRB3O60242 1522 aa21.52■■□□□ 1.04
PTPA-223ENST00000452489 TOB2Q14106 344 aaPredicted RBP21.52■■□□□ 1.03
PTPA-223ENST00000452489 CASP8Q14790 479 aa21.52■■□□□ 1.03
PTPA-223ENST00000452489 NCAPHQ15003 741 aa21.52■■□□□ 1.03
PTPA-223ENST00000452489 USP5P45974 858 aa21.51■■□□□ 1.03
PTPA-223ENST00000452489 SGSM3Q96HU1 749 aa21.51■■□□□ 1.03
PTPA-223ENST00000452489 SDF4Q9BRK5 362 aa21.51■■□□□ 1.03
PTPA-223ENST00000452489 CPLX2Q6PUV4 134 aaKnown RBP21.51■■□□□ 1.03
PTPA-223ENST00000452489 JPH2Q9BR39 696 aaPredicted RBP21.51■■□□□ 1.03
PTPA-223ENST00000452489 RAI14Q9P0K7 980 aa21.51■■□□□ 1.03
PTPA-223ENST00000452489 MINK1Q8N4C8 1332 aaPredicted RBP21.5■■□□□ 1.03
PTPA-223ENST00000452489 SURF6O75683 361 aaKnown RBP21.5■■□□□ 1.03
PTPA-223ENST00000452489 DHX8Q14562 1220 aaKnown RBP21.5■■□□□ 1.03
PTPA-223ENST00000452489 LRCH2Q5VUJ6 765 aa21.5■■□□□ 1.03
PTPA-223ENST00000452489 TMEM139Q8IV31 216 aa21.5■■□□□ 1.03
PTPA-223ENST00000452489 RNF217Q8TC41 542 aa21.5■■□□□ 1.03
PTPA-223ENST00000452489 TOGARAM2Q6ZUX3 1019 aa21.5■■□□□ 1.03
PTPA-223ENST00000452489 CEP120Q8N960 986 aa21.5■■□□□ 1.03
PTPA-223ENST00000452489 CCDC12Q8WUD4 166 aaPredicted RBP21.5■■□□□ 1.03
PTPA-223ENST00000452489 IRX2Q9BZI1 471 aaPredicted RBP21.5■■□□□ 1.03
PTPA-223ENST00000452489 RCOR1Q9UKL0 485 aa21.5■■□□□ 1.03
PTPA-223ENST00000452489 RAB21Q9UL25 225 aa21.5■■□□□ 1.03
PTPA-223ENST00000452489 WDHD1O75717 1129 aaPredicted RBP21.49■■□□□ 1.03
PTPA-223ENST00000452489 KARSQ15046 597 aaKnown RBP21.49■■□□□ 1.03
PTPA-223ENST00000452489 EFCAB2Q5VUJ9 269 aa21.49■■□□□ 1.03
PTPA-223ENST00000452489 HDGFL2Q7Z4V5 671 aaPredicted RBP21.49■■□□□ 1.03
PTPA-223ENST00000452489 ERC1Q8IUD2 1116 aa21.49■■□□□ 1.03
PTPA-223ENST00000452489 RHPN1Q8TCX5 695 aa21.49■■□□□ 1.03
PTPA-223ENST00000452489 USP28Q96RU2 1077 aa21.49■■□□□ 1.03
PTPA-223ENST00000452489 ABCC1P33527 1531 aa21.49■■□□□ 1.03
PTPA-223ENST00000452489 LRRIQ3A6PVS8 624 aaPredicted RBP21.49■■□□□ 1.03
PTPA-223ENST00000452489 SRGAP1Q7Z6B7 1085 aa21.49■■□□□ 1.03
PTPA-223ENST00000452489 GOLIM4O00461 696 aa21.48■■□□□ 1.03
PTPA-223ENST00000452489 CUTAO60888 179 aa21.48■■□□□ 1.03
PTPA-223ENST00000452489 RNF40O75150 1001 aa21.48■■□□□ 1.03
PTPA-223ENST00000452489 ME1P48163 572 aa21.48■■□□□ 1.03
PTPA-223ENST00000452489 VSNL1P62760 191 aa21.48■■□□□ 1.03
PTPA-223ENST00000452489 HSP90AB3PQ58FF7 597 aa21.48■■□□□ 1.03
PTPA-223ENST00000452489 FCHSD1Q86WN1 690 aa21.48■■□□□ 1.03
PTPA-223ENST00000452489 MSL3Q8N5Y2 521 aaKnown RBP21.48■■□□□ 1.03
PTPA-223ENST00000452489 ZFYVE16Q7Z3T8 1539 aa21.48■■□□□ 1.03
PTPA-223ENST00000452489 MRC2Q9UBG0 1479 aa21.48■■□□□ 1.03
PTPA-223ENST00000452489 TMEM232C9JQI7 657 aa21.48■■□□□ 1.03
PTPA-223ENST00000452489 ERLIN1O75477 346 aa21.48■■□□□ 1.03
PTPA-223ENST00000452489 RHOXF2BP0C7M4 288 aa21.48■■□□□ 1.03
PTPA-223ENST00000452489 CCT5P48643 541 aa21.48■■□□□ 1.03
PTPA-223ENST00000452489 BLOC1S2Q6QNY1 142 aa21.48■■□□□ 1.03
PTPA-223ENST00000452489 RUFY2Q8WXA3 655 aa21.48■■□□□ 1.03
PTPA-223ENST00000452489 RHOXF2Q9BQY4 288 aa21.48■■□□□ 1.03
PTPA-223ENST00000452489 SLC27A2O14975 620 aa21.47■■□□□ 1.03
PTPA-223ENST00000452489 TFRCP02786 760 aaKnown RBP21.47■■□□□ 1.03
PTPA-223ENST00000452489 BPIFA3Q9BQP9 254 aa21.47■■□□□ 1.03
PTPA-223ENST00000452489 FAM169AQ9Y6X4 670 aa21.47■■□□□ 1.03
PTPA-223ENST00000452489 PPLO60437 1756 aa21.47■■□□□ 1.03
PTPA-223ENST00000452489 A0A1B0GVL5 298 aa21.47■■□□□ 1.03
PTPA-223ENST00000452489 ARHGAP6O43182 974 aa21.47■■□□□ 1.03
PTPA-223ENST00000452489 MAP9Q49MG5 647 aa21.47■■□□□ 1.03
PTPA-223ENST00000452489 AFAP1L1Q8TED9 768 aa21.47■■□□□ 1.03
PTPA-223ENST00000452489 DESI2Q9BSY9 194 aa21.47■■□□□ 1.03
PTPA-223ENST00000452489 HSD3B7Q9H2F3 369 aa21.47■■□□□ 1.03
PTPA-223ENST00000452489 CABP1Q9NZU7 370 aa21.47■■□□□ 1.03
PTPA-223ENST00000452489 KIAA1468Q9P260 1216 aa21.47■■□□□ 1.03
PTPA-223ENST00000452489 GBP6Q6ZN66 633 aa21.46■■□□□ 1.03
PTPA-223ENST00000452489 FMR1NBQ8N0W7 255 aaPredicted RBP21.46■■□□□ 1.03
PTPA-223ENST00000452489 MSANTD4Q8NCY6 345 aa21.46■■□□□ 1.03
PTPA-223ENST00000452489 FAM107BQ9H098 131 aa21.46■■□□□ 1.03
PTPA-223ENST00000452489 RPS6KB1P23443 525 aa21.46■■□□□ 1.03
PTPA-223ENST00000452489 USP8P40818 1118 aa21.46■■□□□ 1.03
PTPA-223ENST00000452489 UBASH3AP57075 661 aa21.46■■□□□ 1.03
PTPA-223ENST00000452489 TMED8Q6PL24 325 aaPredicted RBP21.46■■□□□ 1.03
PTPA-223ENST00000452489 EFCAB6Q5THR3 1501 aa21.45■■□□□ 1.03
PTPA-223ENST00000452489 PPP1R12AO14974 1030 aaPredicted RBP21.45■■□□□ 1.02
PTPA-223ENST00000452489 SIL1Q9H173 461 aa21.45■■□□□ 1.02
PTPA-223ENST00000452489 ZCCHC11Q5TAX3 1644 aaKnown RBP21.45■■□□□ 1.02
PTPA-223ENST00000452489 PSMA5P28066 241 aa21.45■■□□□ 1.02
PTPA-223ENST00000452489 SCRN1Q12765 414 aa21.45■■□□□ 1.02
PTPA-223ENST00000452489 ANKRD1Q15327 319 aa21.45■■□□□ 1.02
PTPA-223ENST00000452489 CFAP100Q494V2 611 aa21.45■■□□□ 1.02
PTPA-223ENST00000452489 RABEP2Q9H5N1 569 aa21.45■■□□□ 1.02
PTPA-223ENST00000452489 CHD2O14647 1828 aaKnown RBP21.44■■□□□ 1.02
PTPA-223ENST00000452489 TRDNQ13061 729 aa21.44■■□□□ 1.02
PTPA-223ENST00000452489 GIMAP7Q8NHV1 300 aa21.44■■□□□ 1.02
PTPA-223ENST00000452489 GNL3LQ9NVN8 582 aaKnown RBP21.44■■□□□ 1.02
PTPA-223ENST00000452489 MAP2P11137 1827 aaKnown RBP21.44■■□□□ 1.02
PTPA-223ENST00000452489 SERPINC1P01008 464 aa21.44■■□□□ 1.02
PTPA-223ENST00000452489 TOP1P11387 765 aaKnown RBP21.44■■□□□ 1.02
PTPA-223ENST00000452489 NDUFA8P51970 172 aa21.44■■□□□ 1.02
PTPA-223ENST00000452489 SSH3Q8TE77 659 aa21.44■■□□□ 1.02
PTPA-223ENST00000452489 KIF20BQ96Q89 1820 aa21.43■■□□□ 1.02
PTPA-223ENST00000452489 SYF2O95926 243 aaKnown RBP21.43■■□□□ 1.02
PTPA-223ENST00000452489 PPP1R42Q7Z4L9 355 aa21.43■■□□□ 1.02
PTPA-223ENST00000452489 FAM227BQ96M60 508 aa21.43■■□□□ 1.02
PTPA-223ENST00000452489 BAG1Q99933 345 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms