RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 LSG1Q9H089 658 aaKnown RBP12.94□□□□□ -0.34
PKP4-206ENST00000452162 SEC31BQ9NQW1 1179 aa12.94□□□□□ -0.34
PKP4-206ENST00000452162 DDX11L8A8MPP1 907 aa12.94□□□□□ -0.34
PKP4-206ENST00000452162 NEK4P51957 841 aa12.94□□□□□ -0.34
PKP4-206ENST00000452162 PTPN12Q05209 780 aaKnown RBP12.94□□□□□ -0.34
PKP4-206ENST00000452162 TTLL11Q8NHH1 800 aa12.94□□□□□ -0.34
PKP4-206ENST00000452162 TLR7Q9NYK1 1049 aaKnown RBP12.94□□□□□ -0.34
PKP4-206ENST00000452162 SBF1O95248 1867 aa12.94□□□□□ -0.34
PKP4-206ENST00000452162 CELF1Q92879 486 aaKnown RBP12.93□□□□□ -0.34
PKP4-206ENST00000452162 EVI5LQ96CN4 794 aa12.93□□□□□ -0.34
PKP4-206ENST00000452162 MCM2P49736 904 aa12.93□□□□□ -0.34
PKP4-206ENST00000452162 GRAPQ13588 217 aa12.93□□□□□ -0.34
PKP4-206ENST00000452162 CCDC152Q4G0S7 254 aa12.93□□□□□ -0.34
PKP4-206ENST00000452162 GRAPLQ8TC17 118 aaPredicted RBP12.93□□□□□ -0.34
PKP4-206ENST00000452162 CCDC8Q9H0W5 538 aaPredicted RBP12.93□□□□□ -0.34
PKP4-206ENST00000452162 GREM2Q9H772 168 aa12.93□□□□□ -0.34
PKP4-206ENST00000452162 SPEF2Q9C093 1822 aa12.92□□□□□ -0.34
PKP4-206ENST00000452162 PPEF1O14829 653 aaPredicted RBP12.92□□□□□ -0.34
PKP4-206ENST00000452162 FOXO4P98177 505 aa12.92□□□□□ -0.34
PKP4-206ENST00000452162 CLEC17AQ6ZS10 378 aa12.92□□□□□ -0.34
PKP4-206ENST00000452162 GBP4Q96PP9 640 aa12.92□□□□□ -0.34
PKP4-206ENST00000452162 CWC22Q9HCG8 908 aaKnown RBP12.92□□□□□ -0.34
PKP4-206ENST00000452162 CYP2E1P05181 493 aaPredicted RBP12.92□□□□□ -0.34
PKP4-206ENST00000452162 CWC27Q6UX04 472 aaKnown RBP12.92□□□□□ -0.34
PKP4-206ENST00000452162 DIAPH3Q9NSV4 1193 aa12.92□□□□□ -0.34
PKP4-206ENST00000452162 CSF1RP07333 972 aa12.91□□□□□ -0.34
PKP4-206ENST00000452162 RASSF7Q02833 373 aa12.91□□□□□ -0.34
PKP4-206ENST00000452162 IL27Q8NEV9 243 aa12.91□□□□□ -0.34
PKP4-206ENST00000452162 RUFY2Q8WXA3 655 aa12.91□□□□□ -0.34
PKP4-206ENST00000452162 NFKBIEO00221 500 aa12.91□□□□□ -0.34
PKP4-206ENST00000452162 TRAK2O60296 914 aa12.91□□□□□ -0.34
PKP4-206ENST00000452162 BBOX1O75936 387 aa12.91□□□□□ -0.34
PKP4-206ENST00000452162 TMX3Q96JJ7 454 aa12.91□□□□□ -0.34
PKP4-206ENST00000452162 RPS8P62241 208 aaKnown RBP12.9□□□□□ -0.34
PKP4-206ENST00000452162 CUL4AQ13619 759 aa12.9□□□□□ -0.34
PKP4-206ENST00000452162 TNNI3KQ59H18 835 aa12.9□□□□□ -0.34
PKP4-206ENST00000452162 LMBR1LQ6UX01 489 aa12.9□□□□□ -0.34
PKP4-206ENST00000452162 ZGPATQ8N5A5 531 aaKnown RBP12.9□□□□□ -0.34
PKP4-206ENST00000452162 SNX14Q9Y5W7 946 aa12.9□□□□□ -0.34
PKP4-206ENST00000452162 FPGT-TNNI3KV9GXZ4 949 aa12.9□□□□□ -0.34
PKP4-206ENST00000452162 PRELPP51888 382 aa12.89□□□□□ -0.35
PKP4-206ENST00000452162 NUCB2P80303 420 aa12.89□□□□□ -0.35
PKP4-206ENST00000452162 TFCP2Q12800 502 aa12.89□□□□□ -0.35
PKP4-206ENST00000452162 CCDC93Q567U6 631 aa12.89□□□□□ -0.35
PKP4-206ENST00000452162 SNRKQ9NRH2 765 aa12.89□□□□□ -0.35
PKP4-206ENST00000452162 CHMP3Q9Y3E7 222 aa12.89□□□□□ -0.35
PKP4-206ENST00000452162 ATP6V0A2Q9Y487 856 aa12.89□□□□□ -0.35
PKP4-206ENST00000452162 SNED1Q8TER0 1413 aa12.89□□□□□ -0.35
PKP4-206ENST00000452162 ITGA6P23229 1130 aa12.89□□□□□ -0.35
PKP4-206ENST00000452162 KIAA1211Q6ZU35 1233 aa12.89□□□□□ -0.35
PKP4-206ENST00000452162 DBNLQ9UJU6 430 aaKnown RBP12.89□□□□□ -0.35
PKP4-206ENST00000452162 RTL9Q8NET4 1388 aa12.89□□□□□ -0.35
PKP4-206ENST00000452162 LRRC37AA6NMS7 1700 aa12.89□□□□□ -0.35
PKP4-206ENST00000452162 HIP1O00291 1037 aa12.88□□□□□ -0.35
PKP4-206ENST00000452162 SOGA3Q5TF21 947 aa12.88□□□□□ -0.35
PKP4-206ENST00000452162 SP8Q8IXZ3 490 aa12.88□□□□□ -0.35
PKP4-206ENST00000452162 UPF3BQ9BZI7 483 aaKnown RBP12.88□□□□□ -0.35
PKP4-206ENST00000452162 ATP5JP18859 108 aa12.88□□□□□ -0.35
PKP4-206ENST00000452162 PTH1RQ03431 593 aa12.88□□□□□ -0.35
PKP4-206ENST00000452162 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
PKP4-206ENST00000452162 KCNB2Q92953 911 aa12.88□□□□□ -0.35
PKP4-206ENST00000452162 BOLA2Q9H3K6 86 aa12.88□□□□□ -0.35
PKP4-206ENST00000452162 DICER1Q9UPY3 1922 aaKnown RBP12.88□□□□□ -0.35
PKP4-206ENST00000452162 PTMSP20962 102 aa12.87□□□□□ -0.35
PKP4-206ENST00000452162 NMIQ13287 307 aaPredicted RBP12.87□□□□□ -0.35
PKP4-206ENST00000452162 ANKRD18AQ8IVF6 992 aa12.87□□□□□ -0.35
PKP4-206ENST00000452162 CDC5LQ99459 802 aaKnown RBP12.87□□□□□ -0.35
PKP4-206ENST00000452162 TAOK3Q9H2K8 898 aa12.87□□□□□ -0.35
PKP4-206ENST00000452162 BAG4O95429 457 aaKnown RBP12.87□□□□□ -0.35
PKP4-206ENST00000452162 PKP1Q13835 747 aa12.87□□□□□ -0.35
PKP4-206ENST00000452162 CC2D2BQ6DHV5 1058 aa12.87□□□□□ -0.35
PKP4-206ENST00000452162 ATG9AQ7Z3C6 839 aa12.87□□□□□ -0.35
PKP4-206ENST00000452162 RTKN2Q8IZC4 609 aa12.87□□□□□ -0.35
PKP4-206ENST00000452162 FAM227BQ96M60 508 aa12.87□□□□□ -0.35
PKP4-206ENST00000452162 TTC14Q96N46 770 aa12.87□□□□□ -0.35
PKP4-206ENST00000452162 CCDC171Q6TFL3 1326 aa12.86□□□□□ -0.35
PKP4-206ENST00000452162 ANKRD18BA2A2Z9 1011 aa12.86□□□□□ -0.35
PKP4-206ENST00000452162 IFIT5Q13325 482 aaKnown RBP12.86□□□□□ -0.35
PKP4-206ENST00000452162 TMC4Q7Z404 712 aa12.86□□□□□ -0.35
PKP4-206ENST00000452162 INTS4Q96HW7 963 aaKnown RBP12.86□□□□□ -0.35
PKP4-206ENST00000452162 ZNF594Q96JF6 807 aaPredicted RBP12.86□□□□□ -0.35
PKP4-206ENST00000452162 ZDHHC9Q9Y397 364 aa12.86□□□□□ -0.35
PKP4-206ENST00000452162 MED23Q9ULK4 1368 aa12.86□□□□□ -0.35
PKP4-206ENST00000452162 FKBP4Q02790 459 aaKnown RBP eCLIP12.86□□□□□ -0.35
PKP4-206ENST00000452162 C9orf131Q5VYM1 1079 aa12.86□□□□□ -0.35
PKP4-206ENST00000452162 FSD1Q9BTV5 496 aa12.86□□□□□ -0.35
PKP4-206ENST00000452162 TMX4Q9H1E5 349 aaPredicted RBP12.86□□□□□ -0.35
PKP4-206ENST00000452162 ZNF277Q9NRM2 450 aaPredicted RBP12.86□□□□□ -0.35
PKP4-206ENST00000452162 RFX7Q2KHR2 1363 aa12.85□□□□□ -0.35
PKP4-206ENST00000452162 LTBP3Q9NS15 1303 aa12.85□□□□□ -0.35
PKP4-206ENST00000452162 A0A0D9SFI3 127 aa12.85□□□□□ -0.35
PKP4-206ENST00000452162 LMNB1P20700 586 aa12.85□□□□□ -0.35
PKP4-206ENST00000452162 CCDC57Q2TAC2 916 aa12.85□□□□□ -0.35
PKP4-206ENST00000452162 DBNDD2Q9BQY9 259 aa12.85□□□□□ -0.35
PKP4-206ENST00000452162 GPR108Q9NPR9 543 aa12.85□□□□□ -0.35
PKP4-206ENST00000452162 RNF181Q9P0P0 153 aa12.85□□□□□ -0.35
PKP4-206ENST00000452162 LTBP1Q14766 1721 aa12.85□□□□□ -0.35
PKP4-206ENST00000452162 IGHMBP2P38935 993 aaKnown RBP12.85□□□□□ -0.35
PKP4-206ENST00000452162 GPSM2P81274 684 aa12.85□□□□□ -0.35
PKP4-206ENST00000452162 NECTIN1Q15223 517 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms