RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 TRMT112Q9UI30 125 aaKnown RBP14.31□□□□□ -0.12
COL27A1-202ENST00000451716 ATP6V1DQ9Y5K8 247 aa14.31□□□□□ -0.12
COL27A1-202ENST00000451716 ITGB4P16144 1822 aa14.3□□□□□ -0.12
COL27A1-202ENST00000451716 RFX7Q2KHR2 1363 aa14.3□□□□□ -0.12
COL27A1-202ENST00000451716 CSF1RP07333 972 aa14.3□□□□□ -0.12
COL27A1-202ENST00000451716 LDHAL6AQ6ZMR3 332 aa14.3□□□□□ -0.12
COL27A1-202ENST00000451716 TTLL11Q8NHH1 800 aa14.3□□□□□ -0.12
COL27A1-202ENST00000451716 HELLSQ9NRZ9 838 aa14.3□□□□□ -0.12
COL27A1-202ENST00000451716 ZAP70P43403 619 aa14.3□□□□□ -0.12
COL27A1-202ENST00000451716 WASHC4Q2M389 1173 aa14.3□□□□□ -0.12
COL27A1-202ENST00000451716 METTL24Q5JXM2 366 aa14.3□□□□□ -0.12
COL27A1-202ENST00000451716 SYAP1Q96A49 352 aaPredicted RBP14.3□□□□□ -0.12
COL27A1-202ENST00000451716 DISP2A7MBM2 1401 aa14.3□□□□□ -0.12
COL27A1-202ENST00000451716 IRS4O14654 1257 aaPredicted RBP14.29□□□□□ -0.12
COL27A1-202ENST00000451716 UBE2HP62256 183 aa14.29□□□□□ -0.12
COL27A1-202ENST00000451716 MAPK8IP2Q13387 824 aaPredicted RBP14.29□□□□□ -0.12
COL27A1-202ENST00000451716 CDK11BP21127 795 aaKnown RBP14.29□□□□□ -0.12
COL27A1-202ENST00000451716 FOSBP53539 338 aa14.29□□□□□ -0.12
COL27A1-202ENST00000451716 UTP14CQ5TAP6 766 aaKnown RBP14.29□□□□□ -0.12
COL27A1-202ENST00000451716 DZIP3Q86Y13 1208 aaKnown RBP14.29□□□□□ -0.12
COL27A1-202ENST00000451716 TSPY26PQ9H489 355 aa14.29□□□□□ -0.12
COL27A1-202ENST00000451716 HAND2P61296 217 aa14.28□□□□□ -0.12
COL27A1-202ENST00000451716 IRX3P78415 501 aaPredicted RBP14.28□□□□□ -0.12
COL27A1-202ENST00000451716 GTF3C6Q969F1 213 aa14.28□□□□□ -0.12
COL27A1-202ENST00000451716 PLA2G12BQ9BX93 195 aa14.28□□□□□ -0.12
COL27A1-202ENST00000451716 ALDH8A1Q9H2A2 487 aaPredicted RBP14.28□□□□□ -0.12
COL27A1-202ENST00000451716 CNNM1Q9NRU3 951 aa14.28□□□□□ -0.12
COL27A1-202ENST00000451716 TFIP11Q9UBB9 837 aaKnown RBP14.28□□□□□ -0.12
COL27A1-202ENST00000451716 AKAP2Q9Y2D5 859 aa14.28□□□□□ -0.12
COL27A1-202ENST00000451716 CTSWP56202 376 aa14.28□□□□□ -0.12
COL27A1-202ENST00000451716 DMTNQ08495 405 aa14.28□□□□□ -0.12
COL27A1-202ENST00000451716 APOBRQ0VD83 1088 aa14.28□□□□□ -0.12
COL27A1-202ENST00000451716 RIPOR2Q9Y4F9 1068 aa14.28□□□□□ -0.12
COL27A1-202ENST00000451716 SCRN1Q12765 414 aa14.28□□□□□ -0.12
COL27A1-202ENST00000451716 ATP2B3Q16720 1220 aa14.28□□□□□ -0.12
COL27A1-202ENST00000451716 HELBQ8NG08 1087 aaPredicted RBP14.28□□□□□ -0.12
COL27A1-202ENST00000451716 DSCC1Q9BVC3 393 aa14.28□□□□□ -0.12
COL27A1-202ENST00000451716 UBN2Q6ZU65 1347 aa14.27□□□□□ -0.12
COL27A1-202ENST00000451716 NUTM2BA6NNL0 878 aaPredicted RBP14.27□□□□□ -0.12
COL27A1-202ENST00000451716 NUTM2EB1AL46 878 aaPredicted RBP14.27□□□□□ -0.12
COL27A1-202ENST00000451716 E7EWF7 191 aa14.27□□□□□ -0.12
COL27A1-202ENST00000451716 CCT2P78371 535 aaKnown RBP14.27□□□□□ -0.12
COL27A1-202ENST00000451716 NUTM2AQ8IVF1 878 aaPredicted RBP14.27□□□□□ -0.12
COL27A1-202ENST00000451716 DHX32Q7L7V1 743 aaKnown RBP14.27□□□□□ -0.13
COL27A1-202ENST00000451716 TTC6Q86TZ1 520 aa14.27□□□□□ -0.13
COL27A1-202ENST00000451716 PUS7LQ9H0K6 701 aaKnown RBP14.27□□□□□ -0.13
COL27A1-202ENST00000451716 ANKRD18BA2A2Z9 1011 aa14.26□□□□□ -0.13
COL27A1-202ENST00000451716 SNAP23O00161 211 aa14.26□□□□□ -0.13
COL27A1-202ENST00000451716 PDCP20941 246 aa14.26□□□□□ -0.13
COL27A1-202ENST00000451716 CCDC183Q5T5S1 534 aa14.26□□□□□ -0.13
COL27A1-202ENST00000451716 GIMAP6Q6P9H5 292 aa14.26□□□□□ -0.13
COL27A1-202ENST00000451716 ARID3AQ99856 593 aa14.26□□□□□ -0.13
COL27A1-202ENST00000451716 NCOA5Q9HCD5 579 aaKnown RBP14.26□□□□□ -0.13
COL27A1-202ENST00000451716 GPHNQ9NQX3 736 aaPredicted RBP14.26□□□□□ -0.13
COL27A1-202ENST00000451716 FOXP2O15409 715 aa14.26□□□□□ -0.13
COL27A1-202ENST00000451716 HCLS1P14317 486 aaPredicted RBP14.26□□□□□ -0.13
COL27A1-202ENST00000451716 MCAMP43121 646 aa14.26□□□□□ -0.13
COL27A1-202ENST00000451716 RIC1Q4ADV7 1423 aa14.26□□□□□ -0.13
COL27A1-202ENST00000451716 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.26□□□□□ -0.13
COL27A1-202ENST00000451716 ROBO1Q9Y6N7 1651 aa14.25□□□□□ -0.13
COL27A1-202ENST00000451716 PHF14O94880 888 aa14.25□□□□□ -0.13
COL27A1-202ENST00000451716 CDHR2Q9BYE9 1310 aa14.25□□□□□ -0.13
COL27A1-202ENST00000451716 KRT85P78386 507 aa14.24□□□□□ -0.13
COL27A1-202ENST00000451716 DDB1Q16531 1140 aa14.24□□□□□ -0.13
COL27A1-202ENST00000451716 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.24□□□□□ -0.13
COL27A1-202ENST00000451716 ATP6V1AP38606 617 aa14.24□□□□□ -0.13
COL27A1-202ENST00000451716 MAP7D2Q96T17 732 aa14.24□□□□□ -0.13
COL27A1-202ENST00000451716 FBXO3Q9UK99 471 aa14.24□□□□□ -0.13
COL27A1-202ENST00000451716 COL14A1Q05707 1796 aaKnown RBP14.24□□□□□ -0.13
COL27A1-202ENST00000451716 FGAP02671 866 aa14.24□□□□□ -0.13
COL27A1-202ENST00000451716 IL6STP40189 918 aaPredicted RBP14.24□□□□□ -0.13
COL27A1-202ENST00000451716 EXOSC10Q01780 885 aaKnown RBP14.24□□□□□ -0.13
COL27A1-202ENST00000451716 PDLIM2Q96JY6 352 aa14.24□□□□□ -0.13
COL27A1-202ENST00000451716 GOLGB1Q14789 3259 aaKnown RBP14.24□□□□□ -0.13
COL27A1-202ENST00000451716 COL16A1Q07092 1604 aaPredicted RBP14.23□□□□□ -0.13
COL27A1-202ENST00000451716 H3BQV1 296 aa14.23□□□□□ -0.13
COL27A1-202ENST00000451716 CTDNEP1O95476 244 aa14.23□□□□□ -0.13
COL27A1-202ENST00000451716 PHKA1P46020 1223 aa14.23□□□□□ -0.13
COL27A1-202ENST00000451716 IFFO2Q5TF58 517 aa14.23□□□□□ -0.13
COL27A1-202ENST00000451716 SUSD4Q5VX71 490 aa14.23□□□□□ -0.13
COL27A1-202ENST00000451716 MPNDQ8N594 471 aa14.23□□□□□ -0.13
COL27A1-202ENST00000451716 FAM184AQ8NB25 1140 aa14.23□□□□□ -0.13
COL27A1-202ENST00000451716 PDE8AO60658 829 aa14.23□□□□□ -0.13
COL27A1-202ENST00000451716 HMGB1P09429 215 aaKnown RBP14.23□□□□□ -0.13
COL27A1-202ENST00000451716 DNTTIP2Q5QJE6 756 aaKnown RBP14.23□□□□□ -0.13
COL27A1-202ENST00000451716 INTS5Q6P9B9 1019 aaKnown RBP14.23□□□□□ -0.13
COL27A1-202ENST00000451716 RAB11FIP4Q86YS3 637 aa14.23□□□□□ -0.13
COL27A1-202ENST00000451716 VGLL2Q8N8G2 317 aa14.23□□□□□ -0.13
COL27A1-202ENST00000451716 MARCH10Q8NA82 808 aaPredicted RBP14.23□□□□□ -0.13
COL27A1-202ENST00000451716 LRP6O75581 1613 aa14.22□□□□□ -0.13
COL27A1-202ENST00000451716 LAMA4Q16363 1823 aa14.22□□□□□ -0.13
COL27A1-202ENST00000451716 IDH1O75874 414 aaKnown RBP14.22□□□□□ -0.13
COL27A1-202ENST00000451716 LIG1P18858 919 aa14.22□□□□□ -0.13
COL27A1-202ENST00000451716 CRKLP46109 303 aaKnown RBP14.22□□□□□ -0.13
COL27A1-202ENST00000451716 CEBPZQ03701 1054 aaKnown RBP14.22□□□□□ -0.13
COL27A1-202ENST00000451716 CAMK4Q16566 473 aa14.22□□□□□ -0.13
COL27A1-202ENST00000451716 CSPP1Q1MSJ5 1256 aa14.22□□□□□ -0.13
COL27A1-202ENST00000451716 SEC31BQ9NQW1 1179 aa14.22□□□□□ -0.13
COL27A1-202ENST00000451716 FAM13BQ9NYF5 915 aa14.22□□□□□ -0.13
COL27A1-202ENST00000451716 GPAA1O43292 621 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms