RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 FCHSD1Q86WN1 690 aa7.07□□□□□ -1.28
HMGB1P16-201ENST00000447155 IRF7Q92985 503 aa7.07□□□□□ -1.28
HMGB1P16-201ENST00000447155 RNF34Q969K3 372 aa7.07□□□□□ -1.28
HMGB1P16-201ENST00000447155 NXPE3Q969Y0 559 aa7.07□□□□□ -1.28
HMGB1P16-201ENST00000447155 OXCT2Q9BYC2 517 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P16-201ENST00000447155 RASSF4Q9H2L5 321 aa7.07□□□□□ -1.28
HMGB1P16-201ENST00000447155 ZFYVE1Q9HBF4 777 aa7.07□□□□□ -1.28
HMGB1P16-201ENST00000447155 GDF2Q9UK05 429 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P16-201ENST00000447155 ERBB4Q15303 1308 aa7.06□□□□□ -1.28
HMGB1P16-201ENST00000447155 ELOA3CA0A087WX78 387 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P16-201ENST00000447155 ELOA3DA6NLF2 546 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P16-201ENST00000447155 PDE2AO00408 941 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P16-201ENST00000447155 TRPA1O75762 1119 aa7.06□□□□□ -1.28
HMGB1P16-201ENST00000447155 SMNDC1O75940 238 aaKnown RBP eCLIP7.06□□□□□ -1.28
HMGB1P16-201ENST00000447155 CPB1P15086 417 aa7.06□□□□□ -1.28
HMGB1P16-201ENST00000447155 FCGRTP55899 365 aa7.06□□□□□ -1.28
HMGB1P16-201ENST00000447155 ATP11AP98196 1134 aa7.06□□□□□ -1.28
HMGB1P16-201ENST00000447155 PTPN12Q05209 780 aaKnown RBP7.06□□□□□ -1.28
HMGB1P16-201ENST00000447155 SRSF11Q05519 484 aaKnown RBP7.06□□□□□ -1.28
HMGB1P16-201ENST00000447155 ELOA3BQ3SY89 546 aa7.06□□□□□ -1.28
HMGB1P16-201ENST00000447155 DTHD1Q6ZMT9 781 aa7.06□□□□□ -1.28
HMGB1P16-201ENST00000447155 SLCO4C1Q6ZQN7 724 aa7.06□□□□□ -1.28
HMGB1P16-201ENST00000447155 C3orf58Q8NDZ4 430 aa7.06□□□□□ -1.28
HMGB1P16-201ENST00000447155 ELOA3Q8NG57 546 aa7.06□□□□□ -1.28
HMGB1P16-201ENST00000447155 GGA1Q9UJY5 639 aa7.06□□□□□ -1.28
HMGB1P16-201ENST00000447155 PPM1HQ9ULR3 514 aa7.06□□□□□ -1.28
HMGB1P16-201ENST00000447155 ALAS2P22557 587 aa7.05□□□□□ -1.28
HMGB1P16-201ENST00000447155 MEI1Q5TIA1 1274 aa7.05□□□□□ -1.28
HMGB1P16-201ENST00000447155 ELMSAN1Q6PJG2 1045 aa7.05□□□□□ -1.28
HMGB1P16-201ENST00000447155 METTL16Q86W50 562 aaKnown RBP7.05□□□□□ -1.28
HMGB1P16-201ENST00000447155 ANKRD24Q8TF21 1146 aa7.05□□□□□ -1.28
HMGB1P16-201ENST00000447155 PLD4Q96BZ4 506 aa7.05□□□□□ -1.28
HMGB1P16-201ENST00000447155 HHIPQ96QV1 700 aa7.05□□□□□ -1.28
HMGB1P16-201ENST00000447155 FRRS1LQ9P0K9 344 aa7.05□□□□□ -1.28
HMGB1P16-201ENST00000447155 ITPKAP23677 461 aa7.04□□□□□ -1.28
HMGB1P16-201ENST00000447155 GRIA4P48058 902 aa7.04□□□□□ -1.28
HMGB1P16-201ENST00000447155 PERM1Q5SV97 790 aa7.04□□□□□ -1.28
HMGB1P16-201ENST00000447155 CEP135Q66GS9 1140 aa7.04□□□□□ -1.28
HMGB1P16-201ENST00000447155 MICALL1Q8N3F8 863 aa7.04□□□□□ -1.28
HMGB1P16-201ENST00000447155 TTC9Q92623 222 aa7.04□□□□□ -1.28
HMGB1P16-201ENST00000447155 POP1Q99575 1024 aaKnown RBP7.04□□□□□ -1.28
HMGB1P16-201ENST00000447155 SMG9Q9H0W8 520 aaKnown RBP7.04□□□□□ -1.28
HMGB1P16-201ENST00000447155 NAGPAQ9UK23 515 aa7.04□□□□□ -1.28
HMGB1P16-201ENST00000447155 TTF2Q9UNY4 1162 aaKnown RBP7.04□□□□□ -1.28
HMGB1P16-201ENST00000447155 A0A096LPE4 126 aa7.03□□□□□ -1.28
HMGB1P16-201ENST00000447155 A0A1W2PPZ6 126 aa7.03□□□□□ -1.28
HMGB1P16-201ENST00000447155 METTL12A8MUP2 240 aa7.03□□□□□ -1.28
HMGB1P16-201ENST00000447155 ADAMTS2O95450 1211 aa7.03□□□□□ -1.28
HMGB1P16-201ENST00000447155 ERCC5P28715 1186 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P16-201ENST00000447155 KRT76Q01546 638 aa7.03□□□□□ -1.28
HMGB1P16-201ENST00000447155 SPRED3Q2MJR0 410 aa7.03□□□□□ -1.28
HMGB1P16-201ENST00000447155 PSAPL1Q6NUJ1 521 aa7.03□□□□□ -1.28
HMGB1P16-201ENST00000447155 ASAP3Q8TDY4 903 aa7.03□□□□□ -1.28
HMGB1P16-201ENST00000447155 LPIN3Q9BQK8 851 aa7.03□□□□□ -1.28
HMGB1P16-201ENST00000447155 AKAP2Q9Y2D5 859 aa7.03□□□□□ -1.28
HMGB1P16-201ENST00000447155 NISCHQ9Y2I1 1504 aa7.02□□□□□ -1.29
HMGB1P16-201ENST00000447155 EPXP11678 715 aa7.02□□□□□ -1.29
HMGB1P16-201ENST00000447155 PTPRAP18433 802 aa7.02□□□□□ -1.29
HMGB1P16-201ENST00000447155 RPS26P11Q5JNZ5 115 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P16-201ENST00000447155 C9orf131Q5VYM1 1079 aa7.02□□□□□ -1.29
HMGB1P16-201ENST00000447155 HS2ST1Q7LGA3 356 aa7.02□□□□□ -1.29
HMGB1P16-201ENST00000447155 NT5DC4Q86YG4 428 aa7.02□□□□□ -1.29
HMGB1P16-201ENST00000447155 BSNDQ8WZ55 320 aa7.02□□□□□ -1.29
HMGB1P16-201ENST00000447155 ACDQ96AP0 544 aa7.02□□□□□ -1.29
HMGB1P16-201ENST00000447155 NOC4LQ9BVI4 516 aaKnown RBP7.02□□□□□ -1.29
HMGB1P16-201ENST00000447155 RGS9O75916 674 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P16-201ENST00000447155 SV2BQ7L1I2 683 aa7.01□□□□□ -1.29
HMGB1P16-201ENST00000447155 CACTIN-AS1Q8N1I8 211 aa7.01□□□□□ -1.29
HMGB1P16-201ENST00000447155 C8orf37Q96NL8 207 aa7.01□□□□□ -1.29
HMGB1P16-201ENST00000447155 CEP44Q9C0F1 390 aa7.01□□□□□ -1.29
HMGB1P16-201ENST00000447155 ADAM19Q9H013 955 aa7.01□□□□□ -1.29
HMGB1P16-201ENST00000447155 ZNF576Q9H609 170 aa7.01□□□□□ -1.29
HMGB1P16-201ENST00000447155 FAM177BA6PVY3 158 aa7□□□□□ -1.29
HMGB1P16-201ENST00000447155 ZC3H6P61129 1189 aaKnown RBP7□□□□□ -1.29
HMGB1P16-201ENST00000447155 RAD51AP2Q09MP3 1159 aa7□□□□□ -1.29
HMGB1P16-201ENST00000447155 CCDC85BQ15834 202 aaPredicted RBP7□□□□□ -1.29
HMGB1P16-201ENST00000447155 KANK3Q6NY19 840 aa7□□□□□ -1.29
HMGB1P16-201ENST00000447155 TGIF2Q9GZN2 237 aa7□□□□□ -1.29
HMGB1P16-201ENST00000447155 MUC3BQ9H195 1237 aa7□□□□□ -1.29
HMGB1P16-201ENST00000447155 CLEC4MQ9H2X3 399 aaPredicted RBP7□□□□□ -1.29
HMGB1P16-201ENST00000447155 LRRC4BQ9NT99 713 aa7□□□□□ -1.29
HMGB1P16-201ENST00000447155 GGT7Q9UJ14 662 aa7□□□□□ -1.29
HMGB1P16-201ENST00000447155 SOX13Q9UN79 622 aa7□□□□□ -1.29
HMGB1P16-201ENST00000447155 TRIM33Q9UPN9 1127 aa7□□□□□ -1.29
HMGB1P16-201ENST00000447155 STARD13Q9Y3M8 1113 aa7□□□□□ -1.29
HMGB1P16-201ENST00000447155 OIP5O43482 229 aa6.99□□□□□ -1.29
HMGB1P16-201ENST00000447155 SLURP2P0DP57 97 aa6.99□□□□□ -1.29
HMGB1P16-201ENST00000447155 ERMP1Q7Z2K6 904 aa6.99□□□□□ -1.29
HMGB1P16-201ENST00000447155 NUDT8Q8WV74 236 aa6.99□□□□□ -1.29
HMGB1P16-201ENST00000447155 EDARADDQ8WWZ3 215 aa6.99□□□□□ -1.29
HMGB1P16-201ENST00000447155 FBXO24O75426 580 aa6.98□□□□□ -1.29
HMGB1P16-201ENST00000447155 BCRP11274 1271 aa6.98□□□□□ -1.29
HMGB1P16-201ENST00000447155 RLBP1P12271 317 aa6.98□□□□□ -1.29
HMGB1P16-201ENST00000447155 CDC27P30260 824 aa6.98□□□□□ -1.29
HMGB1P16-201ENST00000447155 MAP3K10Q02779 954 aa6.98□□□□□ -1.29
HMGB1P16-201ENST00000447155 PWP1Q13610 501 aa6.98□□□□□ -1.29
HMGB1P16-201ENST00000447155 TPTE2Q6XPS3 522 aa6.98□□□□□ -1.29
HMGB1P16-201ENST00000447155 C20orf204Q6ZNR8 217 aa6.98□□□□□ -1.29
HMGB1P16-201ENST00000447155 C1orf229Q6ZS94 237 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P16-201ENST00000447155 USP48Q86UV5 1035 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms